Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->MYB52(1)                         --------->ARR11(3)                         <---------ARR11(3)                       ----------->ARR10     --------->At4g35610                   --------->ANAC46          <---------At4g35610                  <---------LBD16            <---------HSFC1(2)                    <---------ATHB12                  --------->LBD16            --------->HSFC1(2)                   --------->ANAC46                 <---------HSFB2a(2)      --------->At4g35610                    --------->WOX13(1)                 <---------LBD16          <---------At4g35610                <-----------GT1  <------                 --------->HSFB2a(2)   --------->ICU4                <XXXXXXXXXXXXXXXXXXXXMIR779.2              ------>ZmHOX2a(1) <---------ANAC46  <----------DOF2   <---------WRKY12         --------           ------>ZmHOX2a(1) ----------->HVH21<---------GLK1(2)     <---------WRKY38(1)      <-------   tttttgtttcttcctccttccagggaagaacttgacgggtaatgagcagcttcttttctgtaatagccagtcaactatttttccaatcaacttatttaac  86900                                              --------->ZAT2                                              --------->At4g35610                                              <---------At4g35610                                              <---------ZAT2                                 --------->ZAT2 <---------ZAT18                                   <--   <------ZmHOX2a(1)             --------->At4g35610                  <---------GLK1(1)           <-- -----GT1<---------YAB1       <---------At4g35610                    <---------ARR14(2)     <-------- ->AHL20(2)                   ----------->RAV1(2)                    --------->ARR14(2) --------->YAB1 --AHL20(2)                <---------ZAT18-------->P <-----------RAV1(2)               <---------ATHB12   taataggaactatgtttctagtttgtttgtacacctgctgtctctaccagcagactcaggcttccccagtggatatgtttctcggttcaatgataagatt  87000 -------TOE2(3)                                        <---------YAB1               --------->MYB46(3) -------TOE1(3)      <---------ICU4            <---------At4g35610                 -------->P -TOE2(3)           <---------ATHB12      <----------DOF2              --------->MYB46(3)   aaggttctaatatccaatcccaattactactatgacatgcttagcttttagatgatgttgattcttgttctgaacaactgatactaaccaatttcaaaaa  87100                     <-----------GT1                   --------->AHL20(2)   ---------->DOF2                                     ---------            --------->ZAT18            <---------AHL20(2)                                 <---------ANAC46            --------->ZAT14     --------->ANAC46                                 <---------ZAT14            <---------ZAT18     --------->ANAC58                   --------->YAB1--------->ZAT14            <---------ZAT14     --------->ANAC58       --------->ARR11(3)     <---------ZAT6------>ZmHOX2a(1)   aaaaaaacctattgtgcagaatttaacatcagacacgagatttaaagacatacttaagacattgtttaatgctaattctactgtgaacagtttcctgaag  87200                                            <---------YAB1                                          --------->GLK1(1)                                          <---------GLK1(1)                              --------->HSFC1(2)                                                -----                              <---------HSFC1(2)                                                <----                      <---------ICU4     --------->ARR11(3)                               <----------DOF2                      --------->YAB1------>ZmHOX2a(1)                                   <---------At4g35610                     --------->ICU4--------->TOE1(3)                                  <---------ZAT14                     <---------ATHB12    <---------ARR11(3)                           --------->ZAT18                 ------------>CBF  --------->TOE2(3)                                  --------->ZAT14       <---------ARR11(3)   --------->ARR11(3)               <---------ANAC46     --------->GLK1(2) >LBD16--------->ARR11(3)   <---------ARR11(3)           --------->REM1(2)       <---------GLK1(2)  <   tttatgtaagttcttcgattacaatcatgagatgtttccttaagatatcattttctctgtgttgagtctatctcttgatgttagattctgcgctgtttct  87300                                                                                                    -                                                                                                    -                                                                       ---------->DOF2              <           --------->GLK1(2)                                          ------->GAMYB            ------           <---------ARR14(2)                                        --------->MYB46(3)       <------          <---------GLK1(2)                      <----------DOF2    --------->ANAC58      -----------    ------->TEIL                              <---------ALFIN1      --------->ANAC58 <---------MYB52(1) ---->TOE2(3)                    --------->ARR11(3)             --------->ANAC58    <---------RAP2.6(3) ------DOF2--------->ARR14(2)    <---------ARR11(3)             --------->ANAC58    <-----------HVH21 ---------TOE2(3)*TSS ------>ZmHOX2a(1)---------->DOF2       ---------->DOF2    ------------>MYB.PH3(1)   ttaatgaatttggaatctggcctcctctctcttgagaacttcaaagcagcactttcaagtatgcaaaggcaaccaaagttggaagccgttagaggtataa  87400                                                                        --------->SPL7                                                                      <---------SPL7                                                                      <---------SPL1(2)                 <-------TEIL                                        <---------ANAC55(2)       --------->ALFIN1                                              --------->ANAC55(2)       <-----------RAV1(1)                                           <---------ANAC46    <---------DEAR3(1)                                               <---------ANAC58   <---------LBD16                                              --------->KAN4(1) -------->ZAT2 --------->ARR14(2)                 <----------DOF2    <---------ANAC58 -------->At4g35610                             <---------YAB1  <---------KAN4(1) ---------At4g35610      <---------ANAC58      <---------ARR11(3)--------->KAN4(2) --->YAB1      <---------ARR14(2) --------->ARR11(3)          <---------GLK1(2)    <---------ARR11(3) ---YAB1    <---------ANAC46      <---------ARR11(3)      --------->At4g35610   <---------DAG2 >GT1<---------ANAC46    <---------ANAC58  --------->ZAT6 <---------At4g35610   <----------DOF2   taagctgcggtgttgcatatacattttccttgggaatatctattgacactatctttgttgagcagattgttccgtactggagctttatcttctggtctgt  87500                  <------ZmHOX2a(1)                          ----------->GT1                 --------                 XXXXXXXXXXXXXXXXXXXX>MIR164A/B           --------->GLK1(2)                 <--------             ----------->HVH21                        ----------->GT1 ----------->GT1  <---------ALFIN1    ----------->GT1                                ---------->DOF2    <------MYB83    <------NtERF2  <------ZmHOX2a(1)   ---------->DOF2            <---------YAB1       <------MYB46(1)------>NtERF2   atgaggaggttagaagtgaaggagcaaagctcatacaacttcatcagtgtgatgaaaggtaatctgtaaatttggtttaaaccatggcaccactatgaaa  87600                                            --------->GLK1(2)                                           <---------GLK1(2)              <-------MYC3           --------->CCA1(2) <---------ANAC58                   --------->ARR14(2) <---------ANAC58      --------->LBD16   --------->ANAC46           --------->ANAC58 ->YAB1       ------->MYC3          <---------ARR14(2)  --------->TOE2(3)                       <---- -YAB1  --------->GLK1(2)      --------->DAG2  <----------DOF2      --------->ANAC58  --------->MYB52(1)   atgacttgagattccatgtgtattccagagtataaggcgatacacgattcttttcatacctcagactactacgcacaaaatgtctgcctaagggtatgtt  87700                                                                                  --------->ANAC58                                                                    --------->TOE1(2)                                            <---------WOX13(1)     --------->ZAT2 ----------->GT1                             <---------DEAR3(1)                    <---------At4g35610                             --------->ALFIN1----------->HVH21     --------->At4g35610                             <---------AtMYB61         --------->ANAC58           --------->ANAC58           <---------At4g35610  <---------AtMYB61      --------->ANAC58      <----------ID1      --------->YAB1    ---------->DOF2   --------->ATHB12      <---------At4g35610 -----YAB1 --------->At4g35610<---------MYB46(3)  ----------->HVH21----------->RAV1(2)        -------   tatagctctcatgagatgccatggtttaaaggtggtggtctaaatggttgacatgacaggcatttgagcacctgagagagcgacaagttatatgctatgc  87800  Previous    Next  AGI:  At2g01120.1    Description:  ATORC4/ORC4 (ORIGIN RECOGNITION COMPLEX SUBUNIT 4); protein binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO42220.1); contains domain PTHR12087 (PTHR12087) Range:  from: 87317    to: 88122    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version