Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->MYB52(1)                                                        <---------MYB46(2)                                                        <------------MYB.PH3(2)                                                        <---------MYB59                          --------->ZAT2                <---------MYB52(2)                          <---------At4g35610           <---------MYB111(1)                       <---------ZAT2                 --------->MYB52(1)                       --------->At4g35610          <---------MYB111(1)               --------->YAB1                       --------->ZAT2               <---------MYB59                  <---------YAB1                       <---------At4g35610          <------------MYB.PH3(2)       ----------->GT1              <---------At4g35610                   <---------MYB111(2)         <---------At4g35610             ------->TEIL --------->At4g35610       <---------MYB52(2)          --------->At4g35610             <---------ARR14(2)                     <---------MYB46(2)     <---------LBD16             --------->ARR14(2)                   --------->MYB52(1)      <---------LBD16        <---------At4g35610                     <------------MYB.PH3(2)  <---------LBD16        --------->At4g35610   <---------ANAC46  <---------MYB111(2)    -------->P <---------YAB1      =========================RAV              <---------MYB111(1)   ------->GAMYB--------->YAB1  --      ===============================RAV        <---------MYB59      <---------MYB111(2)          <--      <-----------RAV1(2)----------->RAV1(1)    <---------MYB52(2)   --------->MYB46(3)  --------->YAB1 ---->ZmHOX2a(2)   ----------->RAV1(1)          <---------MYB46(2)   <---------MYB55(2)  --------->AHL20(2) ------ARR11(3)    <---------ALFIN1       --------->ZAT6<---------MYB111(2)--------->LBD16      -----   atctatcttcagatgaatctgccacagcagcagtgtgtaattcatcactaactaactaactaactatatcaacaacccggggagatgataataaaaatca  84800                                                                        <------MYB46(1)                                                                        <------MYB83                                                                    --------->ALFIN1                                                                    <---------DEAR3(1)                                                                   <------NtERF2                                                                  ------>NtERF2                                                                  --------->LBD16                                                                 <---------LBD16               ------                                                                 --------->DEAR3(1)    --------->ARR14(2)                                                                 <---------ANAC46 <------MYB83<------                                                                <---------LBD16   <------MYB46(1)       --------->ALFIN1                                        ------->GAMYB      <---------MYB46(3)    --------->DAG2                                            --------->DEAR3(1) <---------MYB46(3)   ---------->DOF2             ----------->RAV1(2)            --------->ANAC46   <---------AtMYB61 --------->ANAC58         <---------ICU4                    <---------ATERF1(1) <---------MYB52(1) --------->ANAC58         <---------AHL20(2)        --------->At4g35610--------->ALFIN1<---------ARR14(2) ------->YAB1            --------->AHL20(2)         <---------At4g35610<---------AtMYB61     <------- -------ATHB12         --------->YAB1<---------MYB46(3)     --------->MYB52(1) <-------GAMYB <------- ---->WOX13(1)     ------>ZmHOX2a(1)<---------AtMYB61      --------->DEAR3(1) <-----------RAV1(1)   atcaagaaagtggagtttctcctaataataaatacctggtggtctgtcttctacagcagagccaacgccgggggtggtctctgttggtgaatcgtcgtca  84900                                           <---------ANAC46                                         --------->MYB52(1)                                        ----------->TGA1                                        ----------->HVH21                                       <-----------HVH21                                      <---------ANAC58                                      <---------AtLEC2                                      --------->ANAC55(2)      <-----------HVH21               <---------ANAC55(2)              --------->ANAC58     ----------->HVH21                <---------ANAC55(1)    <---------GLK1(2)   --------->ZAT2                     <---------ANAC46      --------->At4g35610   <---------ZAT2                     <---------ANAC58      <---------ZAT2   --------->At4g35610            <-------GAMYB             --------->ZAT2                         <-   <---------At4g35610         ------>NtERF2     --------->GLK1(2)--------->ANAC46                 <- --->ATHB12      ---------->DOF2 <---------DEAR3(1)         <---------At4g35610  ---------->DOF2 <--- ---YAB1   --------->DEAR3(1)  --------->LBD16   --------->MYB52(1)    --------->ANAC58       ------- ----HVH21 --------->MYB46(3) <---------DEAR3(1) <---------ARR14(2)    --------->ANAC46     <-------- ----TGA1 --------->DEAR3(2) <---------LBD16     --------->ARR14(2)   --------->LBD16  <---------At5g28300   ttgagagctgacaccggcccaaagcctttgctccggcgttgcgtgacggagtatcggagtccagcttccctccacgaattgcagaaagttacagcgtaag  85000                                            --------->ARR14(2)                                            <---------ARR14(2)                                           <------NtERF2                                          --------->LBD16                                      <-----                                         <---------ANAC46                                    --------                                  <---------MYB46(3)                                         --------                             <---------ANAC46                               <---------At4g35610------ --------WRKY38(1)           <---------ANAC58                              <-----------RAV1(1) ------ --------WRKY12     --------->ANAC58    <---------LBD16        <---------ARR14(2)   <---------CCA1(2) ---ZmHOX2a(1)      --------->ANAC58   <---------ANAC46    --------->At4g35610 <---------At4g35610 -- -->SPL7           ------->TEIL  --------->ALFIN1  <---------MYB46(3)  <---------ANAC58 --------->HSFB2a(2) -SPL7  <----------DOF2      <---------ANAC58     <---------ANAC46     <---------ANAC58 <---------HSFB2a(2)   gacaacgctgctttgtaggcgaacccaagttgcgagtggtgaggcggaaatggtggataagagcagaactagtgcttgtgctgctcatctctcgaagaat  85100         <---------ANAC58         <---------ANAC58                                                    <-------GAMYB         <---------ANAC46                                         --------->LBD16      <---------CCA1(2)                                         <---------LBD16 ----ARR14(2)                                                 <---------ARR14(2)   <---------ALFIN1 ->HSFC1(2)                                                   --------->ARR14(2)   ----------->RAV1(1) ->HSFB2a(1)<---------TOE1(2)           --------->At4g35610 <------MYB46(1) --------->MYB52(2) --->GLK1(2)<---------TOE2(2)          --------->ARR11(3)   <------MYB83    <---------ANAC58 --->ARR14(2)<-----------RAV1(1)       <---------ARR11(3)   <---------MYB46(3) --------->WRKY38(1) <- ---->ZmHOX2a(1)                 ---------->DOF2        --------->ATHB12    <---------ANAC58       --   cctctctcgtatcgtatgttgttgattttcaattgcaaagagagcttcagagaaggaacgattggttccggtcgagtttcgttgcccacatttgatattt  85200               <----------DOF2                                                             --------->ANAC58               ------>ZmHOX2a(1)                                               --------->ICU4            <---------ATHB12                                                   <---------MYB52(1)           --------->ARR14(2)                                             --------->bZIP60(1)        ------->GAMYB                                                     <---------bZIP60(1)      -------->P              <---------MYB52(1)                          --------->O2     --------->ANAC58    --------->MYB46(3)       *TSS<-----------GT1                       --------->ANAC46  ---------->DOF2 --------HSFB2a(2)           <-------GAMYB                   ------------>CBF----------->GT1  ------- ------->HSFB2a(2)     <-----------GT1                      --------->ZAT6<---------O2<------ZmHOX2a(1)   tccaaaacaacccaatccttttttttttctccgttaaaccttcttccatcacaaacttgctaacacaatgtaaacgacgtcgttattaggagaaagcaaa  85300                                                                                   --------->ZAT18                                                                                   <---------ZAT18                                                                                   <---------ZAT14                                                                              <---------ANAC46                      <---------------AGL15                                   <---------ANAC58                      <----------DOF2                                         <---------ANAC58                      --------------->AGL15                                  <---------MYB46(3)                      <---------DAG2                                      --------->ATHB12     <-----                     <---------ANAC58                                    --------->ICU4        ------     <------------CBF<-----------------AGL2                              <---------YAB1        <-----    --------->ATHB12 <---------ANAC58                                  --------->YAB1   <---------ZAT14  <----------DOF2<------------CBF        --------->ANAC46             <---------ZAT6    --------->ZAT14 --->DOF2    <----------DOF2        <---------ICU4 <---------ZAT6     --------->ICU4  --------->ANAC46   ggagctttattgggccttttattgctttataaggcccattactacggcccatagagtaagtttatactagtagtgatgatgggtgttcacttcacagttc  85400                                                                 <---------GLK1(1)                                                                 --------->GLK1(1)                                                            --------->LBD16                               --------->LBD16             <---------ANAC46                               ------>NtERF2               <---------DEAR3(1)                              --------->ANAC46           ------>NtERF2                              --------->ANAC58           --------->LBD16             --------->LBD16                <---------ANAC46                        <---------DEAR3(1)          <---------LBD16                <---------ANAC58                       <---------LBD16             <---------LBD16 ----ZAT14      <---------ANAC58        <---------MYB52(1)<---------LBD16      <---------GLK1(2) --->ZAT14 <---------ANAC58   --------->ANAC58       --------->GLK1(2)   <---------CCA1(2)          - ----ZAT18 <---------ANAC58  <---------LBD16  ---------->DOF2<------NtERF2   <---------YAB1--------->GLK1(2)   acacagagggctcgcttggcttgtcagttttcccgccagtccgatgggcaaagagactccggcggagaaatccctaaatctgattcgcgggagactctgt  85500                                                                        ---------->ID1             <-                                                                    ===================bZIP_DOF   <--                                                                    ===================bZIP_DOF   <--                                                                    <---------TGA1a          ------->TEIL                                                                    --------->TGA1a  --------->ANAC46                                                           <---------ANAC58         <---------HSFB2a(2)                                                           <---------ANAC58         --------->HSFC1(1)                                                        <---------WOX13(1)  <----------DOF2  <-------       --------->MYB59          <-----------HVH21     --------->ATHB12 <-----------HVH21     --------  ------>ZmHOX2a(1)        <---------At4g35610       <---------YAB1 --------->O2    <---------HSFC1(1) ----->ZmHOX2a(2)     <----------DOF2     --------->WOX13(1)        <---------O2    --------->HSFB2a(2)   gatcctagttatgtcttcagacctctttccgcttcgtcagatagcaattacaggtctgattgcttcactcacttgtcgcttaatttctcgaaacgaattt  85600          <---------------AtSPL8        ------>MYB83        ------>MYB46(1)      <---------MYB59      --------->TOE2(3)   <-----------GT1                                                                               <--- ---------DOF2                       --------->At5g28300             <---------LBD16       <--------- -------ANAC58                      ----------->GT1               <-----------HVH21--------->MYB46(3) -------ANAC58                   --------->ANAC46           ------->TEIL      --------->ANAC58  <---- --ARR14(2)                     ------->GAMYB               -------->P        --------->ANAC58  <---- ->ARR14(2)                   <---------REM1(2)  <-------TEIL --------->TOE2(3)    --------->REM1(1)-   gcttttaacctaatagtacaaacaaatttgtcaacacacagtaaattgaagttcattgtatcaacctctatcacggagggatgcaacaactcgatgttgc  85700  Previous    Next  AGI:  At2g01110.1    Description:  APG2 (ALBINO AND PALE GREEN 2). similar to hypothetical protein [Vitis vinifera] (GB:CAN69811.1); contains InterPro domain Sec-independent periplasmic protein translocase (InterPro:IPR002033) Range:  from: 83260    to: 85229    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g01111.1    Description:  unknown protein Range:  from: 85444    to: 85608    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version