Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     ---------->DOF2                 <------ZmHOX2a(2)           ------>MYB46(1)                 <---------LBD16                <-----------ARR10            ------>MYB83                 <---------GLK1(1) --------->ARR11(3)    --------->TOE1(3)    --------->MYB52(1)           ------->TEIL         <------ <---------ARR11(3)    --------->TOE2(3)    ----------->RAV1(1)     <---------AtLEC2    --------->RAP2.6(2) ------GT1 --------->MYB52(1)              --------->AtMYB61 <---------ARR11(3)--------->LBD16-------   caatatcatccctcaacggatcaaaccttgacgaccagtcttggaccaacagatagttcccaagaactctccatggacctccggttaaagcagccatata  69500                                             --------->WOX13(1)                                          --------->ARR14(2)                       <---------YAB1     <---------ARR14(2)                     <---------ICU4      --------->GLK1(1)         <---------DEAR3(2)                     --------->YAB1--------->LBD16                 <---------MYB46(3)                    --------->ICU4<---------ANAC58              ------>NtERF2                    <---------ATHB12<------NtERF2              ----------->HVH21       <---------ANAC58                  ------>MYB46(1) <---------DEAR3(1)  --------->YAB1                   <---------ANAC58 ------>ZmHOX2a(1)------>MYB83    <---------ANAC58    --------->bZIP60(1)             --------->ZAT2 ---ARR14(2)    <---------MYB59   <---------ANAC46    <---------bZIP60(1)          <---------MYB52(1) -->ARR14(2)    --------->TOE2(3)<---------LBD16    <-----------HVH21     ---------->DOF2          <-   ctcctcttccagttcaaacctaatcatgaaaaactggcggggcaaatccatcactgtcatcactcccgacggtttccaaagctcccttagcttgcgattc  69600                           ------->TEIL            --------->ARR14(2)            <---------ARR14(2)            --------->GLK1(2)         --------->YAB1           <---------GLK1(2)         <---------YAB1                                      ----------->GT1        ------>ZmHOX2a(2)--------->MYB46(3)                               <---------ALFIN1     <-----       <------ZmHOX2a(2)--------->ANAC46                           <---------ANAC58      --------->YAB1      --------->ARR14(2)--------->ANAC58                      --------->YAB1     ------>ZmHOX2a(1)      <---------ARR14(2)--------->ANAC58            ---------->DOF2<---------ANAC58     <---------ATHB12 --------ALFIN1      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------ATHB12--------->AtMYB61-------   aacaccgagatcggaatctggctcccaagcaccttcactatcatacacttcttccaaagcccattcatggcttccaacacctcctcaccaatggtaataa  69700                                                                  --------->O2                                        <---------ALFIN1          --------->TGA1a                                       --------->At4g35610        --------->ANAC55(2)                                      --------->ANAC58            <---------O2                                     <---------MYB55(2)           <---------ANAC55(2)           -----                                     --------->MYB46(3)        <---------ATHB12              --------                   --------->HSFB2a(2)--------->ANAC46       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      --------->TOE2(1)             <---------ALFIN1         --------->WOX13(1)          ------>MYB46(1)      --------->TOE1(1)            ------>NtERF2           <---------YAB1                ------>MYB83     ------>ZmHOX2a(1)            <---------ALFIN1        --------->TOE2(3)            --------->AtMYB61    <---------ALFIN1           --------->PCF2            --------->YAB1             <-----------GT1<- ------GT1         <---------HSFB2a(2)--------->ANAC58   <---------ICU4            <---------ARR11(3) -->ICU4   ------>ZmHOX2a(1)   <---------TCP20          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ---------   ctggctcctcgtcctcaccatctggaaactccagccccacccgctccctcacaaactcatcatcaatcacgtcttctggtttcaagatacctcccccagc  69800                                                        ------>NtERF2                                                       --------->ANAC46                                                       --------->ANAC58                                                       --------->ANAC58                                                      --------->ATERF1(1)                                                      --------->SPL7             --------->YAB1                                              ----------->RAV1(2)      --------->TGA1a                                              <---------LBD16          <---------bZIP60(1)                                            ------>ZmHOX2a(2)          --------->bZIP60(1)                      <---------ALFIN1     <---------GLK1(1)           <---------TGA1a                     --------->TGA1a       <------ZmHOX2a(2)           --------->O2                     --------->ANAC58      --------->GLK1(1)           <---------O2                     --------->O2         --------->ARR11(3)           --------->bZIP60(2)                     ===================================================bZIP_DOF<---------YAB1                     --------->ANAC58     --------->ARR14(3)         ------>NtERF2                  --------->ZAT18         <---------ARR14(3)        ----------->HVH21            <---------ANAC58              <---------ARR11(3) <----------DOF2  --------->YAB1   --------->ANAC46  --------->ANAC46     --------->ARR14(2) <---------DAG2 --------->ANAC58 ---->ZAT6  <---------ANAC58              <---------ARR14(2) ====================bZIP_DOF ->ANAC46======================bZIP_DOF  <------ZmHOX2a(1)  <---------DAG2  --------->ANAC58        < --------ALFIN1   <---------ZAT18    --------->LBD16 <---------ATERF1(1)<-----------HVH21        ---- >LBD16  <----------DOF2           <---------LBD16  <---------SPL7  --------->DEAR3(1) --------->ARR11(3)   actacccttcactttcgtagcccacgactccaacttatccggaggatcccctggtggacgccccttttctccgacgtcaagcatcatagcatcttgctca  69900             <------NtERF2             --------->ATERF1(1)            ------>NtERF2            <---------ATERF1(1)            <-----------HVH21           --------->O2           <---------O2           --------->DEAR3(1)           --------->RAP2.3(2)          --------->RRTF1(1)          --------->RAP2.3(1)          --------->ERF1         ------>NtERF2         --------->ABI4(1)        --------->DEAR3(1)        --------->ANAC46       --------->DEAR3(2)      <---------AHL20(2)       --------->MYB46(3)  <---------YAB1      <---------At5g28300 <---------AHL20(2)    ----------->HVH21     <---------AHL20(1)   ------>ZmHOX2a(2)      --------->AHL20(2)  xxxxxxxxxxxxxxxx>smallRNA(i) --------->AHL20(2)  --------->GLK1(1)       --------->AHL20(1)               ------>ZmHOX2a(2)  <------ZmHOX2a(2)      --------->YAB1                   <------ZmHOX2a(2) <---------ARR11(3)      --------->AHL20(2)               --------->GLK1(1) --------->ARR11(3)      <---------AHL20(2)              --------->ARR14(2) <-----------ARR10    <--------HAHB4             <---------TOE2(3)    <----------DOF2 --------->ARR14(2)   <---------ICU4 <-----------GT1     <---------ARR11(3) <---------ARR14(2)   --------->YAB1--------->AHL20(1)   <---------ARR14(2)                        <- <---------AGP1      --------->AHL20(2)       --------->AHL20(2) --------->YAB1                    -- --------->AGP1      --------->ICU4 --------->ARR11(3)   --------->ARR11(3)                       <-- ---------CCA1(2)<xxxxxxxxxxxxxxxxsmallRNA(i) <---------AHL20(2)<---------YAB1                   ---- ----------------->WRI1 <---------YAB1  ----------->GT1 <------ZmHOX2a(1)     ---------->DOF2 <------   ccagatctcaccgccgtcgcagaataattatattaaaatatactgtatataaatgttaggatccccatgatacttttatctaaagaaatgttagaatact  70000                                                                            <---------AHL20(2)                                                                        <---------YAB1                                                                       <---------AHL20(1)                                                                       --------->AHL20(2)                                                                       --------->AHL20(1)                                             --------->ARR11(3)       --------->YAB1                                             <---------ARR11(3)       <---------AHL20(2)                                             <---------ICU4           --------->AHL20(2)                --------->AHL20(2)      <---------AHL20(2)           <---------YAB1                ----------->TBP         --------->AHL20(2)         --------->YAB1            <-----------TBP            --------->YAB1              <---------ICU4          --------->CCA1(2) --------->AHL20(1)                    --------->ICU4         <---------ARR11(3) --------->AHL20(2)                    --------->AHL20(2)       <---------TOE2(3)    <---------AHL20(2)                <---------AHL20(2) --------->AHL20(1) --------ANAC55(2)          <---------AHL20(1)                --------->AHL20(2) --------->ARR11(3) ------->ANAC55(2)         <---------AHL20(2)<---------AHL20(1)   <---------ATHB51<-----------GT1  <- -------LBD16 ----------->TBP    <-----------GT1            --------->YAB1  --------->AHL20(2)    <-- ----->MYB52(1) <---------AHL20(2)------------>CBF     ------------>CBF<---------AHL20(2)         --- ---ICU4 --------->ARR11(3)--------->AHL20(2)--------->AHL20(1)   <---------AHL20(2)         --------   tacggatttaagatatatataaatccaaattaaattttcaattttaatattttcttcaacaattttaaataattatattaaaatatactgtattttcata  70100                              <-----------TBP                              --------->AHL20(2)                          <---------AHL20(2)                          --------->AHL20(2)                          <-----------TBP                      <-----------TBP                      --------->AHL20(2)                      <---------AHL20(2)                    <-----------TBP                    --------->AHL20(2)                  <-----------TBP  --------->AHL20(1)                  --------->AHL20(2)    <---------AHL20(2)                <---------AHL20(2) <---------AHL20(1)          <---------AHL20(2)               -----              <---------AHL20(2)--------->AHL20(2)             --------->AHL20(2)               <----              --------->AHL20(2)<-----------TBP               <---------AHL20(1)                -----            <-----------TBP <---------AHL20(2)                --------->AHL20(2)               <-----          --------->AHL20(2)--------->AHL20(2)                --------->AHL20(1)             <-------          <---------AHL20(2)<-----------TBP                   <---------AHL20(2)            <--------        <-----------TBP --------->AHL20(2)       --------->AHL20(2)  <---------TOE2(3)      ---------    --------->ANAC55(2) <---------AHL20(2)       <---------AHL20(2)<---------AHL20(2)       ---------    <---------ANAC55(2) <-----------TBP<---------AHL20(2) <---------AHL20(2)                <--------  <-----------GT1 <---------AHL20(2)   --------->AHL20(2)--------->AHL20(2)                --------->AHL20(2) --------ICU4 <-----------TBP <---------AHL20(2)--------->AHL20(2) --------->AHL20(2)      <---------AHL20(1) -------AHL20(2)--------->AHL20(2)<---------AHL20(2) --------->AHL20(2)                --------->YAB1 ------>AHL20(2)<-----------TBP <---------AHL20(2)   <---------AHL20(2)           --------->AHL20(2) ->YAB1------->TEIL <---------AHL20(2)<---------AHL20(2) <---------AHL20(2)    --------->YAB1--------   ttaattacgaatttatatatatatatatatatatatatatattaattagatttaattttttaaatttaattaatatttcaaagataaaatcaaaataatt  70200                                                                      <----------DOF2                                                                     <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                  <------MYB83                                                                  <------MYB46(1)                                                                <--------P                                                               <---------ANAC58    <----------DOF2                                            <---------ANAC58 <-----------GT1                                              --------->MYB55(2) ---->AHL20(2)                                                <------MYB83 -----AHL20(2)                                                --------->ATHB12 ---->YAB1                                                    <------MYB46(1) ----YAB1                                                     <---------MYB46(3) --ICU4                                                     <---------WOX13(1) -AHL20(2)                                                --------->ATHB12 >AHL20(2)            ----------->GT1           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              -- >ICU4       --------->AHL20(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                        <xxx -ATHB51     <---------AHL20(2)    <---------ZAT18       <---------YAB1                  --------->TOE1(3) ->YAB1--------->TOE2(3)           --------->ZAT18     <---------AtLEC2                  --------->TOE2(3)   atatcactttcttaaaaaaatgaacagttcaaaaatgtccactctgtagaaactcgtgcatgattggttgggctttaaatctgacttacagccttaattt  70300               <---------ANAC58                <----------DOF2               <---------ANAC58               <---------ANAC58             <-----------GT1             <---------REM1(1)                     <---------AHL20(2)             <---------AHL20(2)  --------->MYB52(1)                       <---------AHL20(2)     <xxx  ---------->DOF2              --------->MYB46(3)       <-----------GT1  --------->AHL20(2) <-------- ------->TOE2(3)             --------->ANAC46 <---------ANAC58---------->DOF2 <---------AHL20(2) <--- xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------ATHB12<----------DOF2       <---------AHL20(2) <--------   ttcttaaagccctattttcttgctaacttacaaaccaatggtgttgtagctttctttttaaacttacagcccaaattttttttattttgtttttaaggct  70400  Previous    Next  AGI:  At2g01050.1    Description:  nucleic acid binding / zinc ion binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G31430.1); similar to Zinc finger, CCHC-type [Medicago truncatula] (GB:ABE91952.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) Range:  from: 68337    to: 69884    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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