Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          ---------->DOF2       <---------WRKY12       <---------WRKY38(1)    ------->GAMYB   --------->ZAT6 ------>MYB83 --------->MYB52(1) ------>MYB46(1) -------->MYB55(1) ---------->HVH21 --------MYB59                                              --------->ATHB12 --------MYB111(1)                                         --------->ICU4 --------MYB111(2)                                         <---------YAB1 --------MYB46(2)                                     --------->ARR14(1) --------MYB52(2)                                    <---------ARR14(2)           <----------ID1 ------>ANAC46 ----------->HVH21       --------->ANAC46<-------TEIL             ---------->DOF2 -------At4g35610                 --------->TOE2(3)  <---------GLK1(2)----------->GT1 ------>ANAC55(2)                 --------->TOE1(3)  --------->ARR14(2)    ---------->DOF2   acctaacagtcaaagatgtgaccttcaagtatcaaaccttcacaaaactaaaccagattcgatgattaaaacttgaaaaaagaaaagacaaaactttcac  30393800                                                     <---------YAB1                                                   --------->YAB1                                                  <---------YAB1                                               <---------YAB1                                              --------------------->WRI1                                              <----------DOF2                                             ------>ZmHOX2a(2)                                            <---------RVE1(1)                                            <------ZmHOX2a(2)                                           <---------ARR14(3)                                           <---------ARR11(3)                                           --------->ARR14(2)                                           <---------ARR14(2)          <-------TEIL<---------------AGL15--------->ARR14(3)    --------->ANAC58       <---------At4g35610                --------->RVE1(1)      --------->ANAC58       --------->At4g35610             ---------->DOF2--------->YAB1               <---------ANAC55(2)  --------->ETT(2)   <-----------------AGL3--------->ARR11(3)------>ZmHOX2a(2)     --------->ANAC55(2)   aacgtctacagatgcaatttcaaactaaaaatggatttgactaaagatctttattatcatcgatctcatgccattcgattcgattacgaattcaacaaat  30393900                                                                                     <-----------RAV1(2)                                                                                   ------>NtERF2                                                                                   --------->ATERF1(1)                                                                                   <------NtERF2                                                                                  ------>NtERF2                                                                                 <---------DEAR3(1)                    --------->ATHB12                                             <---------RAP2.6(2)                 ---------->DOF2                                                <------NtERF2         ----------->GT1                                                        --------->ATERF1(1)        --------->ANAC58                                                       <---------RAP2.3(1)        --------->ANAC58                                                       <---------ATERF1(1)      --------->MYB52(1)                                                      --------->ALFIN1     --      <---------ARR14(2)                <---------ARR14(2)                    <---------DEAR3(1)-----     <------ZmHOX2a(1)                  --------->GLK1(2)                 <---------At4g35610   -----   <---------------AtSPL3    ----------->HVH21  ---------->DOF2        ---------->DOF2  <------ZmHOX2a(1)   tgagagaggaacggaaacaaaaagattggacctgaagttgagaaactggccaaaggccatgagaggccagaagtagagcggaggcggccaggagagagaa  30394000                                                 <-------MYC3                                                 ------->PIF4                                                 ------->MYC3                                                 ------->PIF5                                                 <-------PIF4                                                 ------->MYC2                                                 <-------PIF5                                                 ------->MYC4                                                --------->TGA1a                                                --------->O2                                                ====================================bZIP_DOF                                                --------->ANAC55(2)                                                <---------TGA1a                                                <---------ANAC55(2)                                      ------->MYC3                                      ------->MYC4                                      <-------MYC2                                      <-------MYC4                                      <-------MYC3                                      ------->PIF5                                      ------->PIF4                                      ------->MYC2                                      <-------PIF4                                      <-------PIF5                                     --------->ANAC55(2)                                     --------->TGA1a                                     <---------O2<-------MYC4                                     ===============================================bZIP_DOF                                     --------->O2<-------MYC2                                     <---------ANAC55(2)                                     <---------TGA1a                                     --------->ANAC58                                     =====================bZIP_bZIP                         <--------                                     --------->ANAC58                              <---------At4g35610                                    ------------>OsbHLH66                          <------NtERF2             ==================================bZIP_DOF                            --------->At4g35610  =============================================MYC_MYB                            --------->RAP2.6(2)  ------->GAMYB         --------->At4g35610     <---------O2                      ----------->RAV1(1) ------->MYB52(1)       <---------At4g35610    ------------>OsbHLH66     <----------DOF2  <---------WOX13(1) ---->ANAC58 ---------->DOF2       <------------OsbHLH66 <---------At5g28300    ------>NtERF2 ---->ANAC58 =============================================bZIP_DOF<---------MYB46(3)<------NtERF2 ---   gcaacggagaagagagaaaggagttgagcagccttgagcacgtgagaaacacgtgccattaccgtcgatgggtctctttctcggccgcagagattgaccc  30394100                                                           <------NtERF2                                                           ------>NtERF2                                            ------->GAMYB<---------RAP2.6(2)                                  --------->ARR14(2)    <---------LBD16                               --------->ANAC58--------->GLK1(1)                     ----------->RAV1(1)  --------->At4g35610    <---------ICU4          <---------ANAC58                     ------>NtERF2<---------ARR14(2)   ------>ZmHOX2a(2)                 <---------ANAC58              <---------ALFIN1 --------->ANAC58<---------GLK1(1) --------->YAB1        <-----------GT1 -WRKY18(1)  --------->ETT(2) <-----------------AGL1  <------ZmHOX2a(2)       <----------DOF2 *TSS -------->HVH21    --------->MYB46(3)    ----------->RAV1(1)    <---------ATHB12  <----------DOF2 <--   atgactgagcattcgtccacagccaccagtagaacggaaatggcaacagaactccgatcgcggccaataatcccatttcgctttctttttttcttgctct  30394200                                         --------->AHL20(2)                                         <---------AHL20(2)                               <------------CBF           --------->ARR14(2)                              --------->ATHB12            <---------ARR14(2)                             <---------YAB1          ----------->RAV1(1)                           <----------DOF2         <------NtERF2                --------->ANAC58       <----------DOF2    <---------GLK1(2)     <---------YAB1       ==============================MADS_MADS           --------->GLK1(1)       <  <-----------GT1         <-----------------AGL3  <xxxxxxxxxxxxxxxxsmallRNA(s)                     -- -------MYB52(1)--------->ANAC58      <-----------------AGL3           --------->MYB52(1)   ---------   gttttttctgattttcccaagaaaaacgacttttattgggtctttaaatgggcctcaacagatttgtttggcccaagggtatctaaatagccatcaacag  30394300                                                                                                    <                                                         --------->YAB1                            <-                                                        <<<<<<<<<ARR1                            <---          --------->MYB52(1)                            <---------ATHB12                         <--- ---------AHL20(2)                       <----------DOF2<<<<<<<<<ARR2                 ---------->DOF2 ------->AHL20(2)                 <---------ARR11(3)------------>CBF                <---------AHL20(2) -->RAV1(1)                  <------NtERF2     ------------>CBF   <---------ALFIN1  --------->AHL20(2)   atttatttggcccaagggtctctaaataggcctcaacatatttcttttgcccaatacaatcatatgctacacatcttcaaatcaaattaaaagtaagttt  30394400                                                                                                    -                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                           <---------AHL20(1)                                              <---------AHL20(2)                           --------->AHL20(1)     <----------DOF2                     <---------ARR11(3)                               --------->CCA1(2)    <---------DAG2                     ------>MYB46(1)                                   --------->ARR11(3) ---------WOX13(1)                     ------>MYB83                        --------->YAB1<---------ARR11(3) -----------CBF                       ----------->RAV1(1)                 <------ZmHOX2a(2)--------->ARR11(3) ------YAB1                          --------->AtMYB61           <------MYB83     <---------HSFB2a(2) ------AHL20(2)               *TSS--------->REM1(1)              <------MYB46(1)  --------->HSFB2a(2)   taattgcctttttttttttttttgtattcaagggctacaccaacatattttttttgtattatgtagtgggtttacgatcatcgtctagatagatatattg  30394500                                                                               --------->ARR11(3)                                                                               --------->ARR14(2)                                                                               <---------ARR14(2)                                                                               <---------GLK1(2)                                                                             ----------->ARR10                                                                           <------ZmHOX2a(2)         <------ZmHOX2a(2)                                                <---------ARR14(2)        --------->ARR11(3)                                        --------->ANAC46    --------->ANAC55(2)        <---------ARR11(3)                                      <-----------GT1<---------ARR11(3) -------->ARR11(3)                                       <---------YAB1--------->ANAC58 ---------ARR11(3)                                     <-----------GT1 --------->ANAC58 --------GLK1(1)                  --------->ZAT6    <---------MYB46(3) --------->ANAC46   --------->ARR11(3) --------CCA1(2)             <---------At4g35610    --------->MYB52(2) <---------ANAC55(2)<---------ARR11(3) ------->GLK1(1)             --------->At4g35610 ------------>MYB.PH3(2)  --------->ARR14(2)------>ZmHOX2a(2)   gatatctcaagatcaactatgcctaagtgtctgctaacaatacatcgctcaagtttgttacgatatatacagcacggatcagattttcaagtgatcttct  30394600                                                        --------->ALFIN1                           --------->At4g35610          <-------GAMYB                 <----------DOF2                       <---------MYB46(3)           <----------DOF2 <---------At4g35610     <---------DEAR3(1)          ------>ZmHOX2a(1)         <---------At4g35610       <---------GLK1(1) <------NtERF2      ------>ZmHOX2a(1)         --------->At4g35610 <----------DOF2     <---------ANAC58   --------->ARR14(2)     <----------DOF2    <------NtERF2  <----------DOF2<---------ANAC46 --------->TOE2(3)   <---------At4g35610  <---------At4g35610      <---------ANAC58   <---------ARR14(2)   --------->At4g35610  --------->At4g35610  <----------DOF2        <---------ARR11(3)   <---------TOE1(2)   acttccgcttcagctttagctttggctgcagctttagaattcttttcctttgctcggcgtttggctccaagttcctcaatcctcttcatcccagttttga  30394700  Previous    Next  AGI:  At1g80860.1    Description:  N-methyltransferase. similar to unnamed protein product [Vitis vinifera] (GB:CAO49412.1); contains InterPro domain Phospholipid methyltransferase; (InterPro:IPR007318) Range:  from: 30392927    to: 30394194    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g80865.1    Description:  unknown protein Range:  from: 30394430    to: 30395449    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version