Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  ----------->RAV1(1)                                                                            -------->P                                                                          ------->GAMYB                                          --------->ARR14(2)             --------->MYB46(3)       <--                                         <------NtERF2                   <---------MYB111(1)      ---                          --------->TOE1(3)                              <---------MYB46(2)   <------                       <-----------GT1  ------>NtERF2----------->GT1     <---------MYB52(2)   -------                  --------->ICU4       --------->RAP2.6(2)          --------->ANAC46         --------                  <---------ARR11(3)   <---------DEAR3(1)           --------->ANAC58         --------                  <---------AHL20(1)   <---------RAP2.6(2)        ---------->DOF2           ---------                  --------->ARR11(3)   <---------ATERF1(2)   --------->AHL20(2)----------->HVH21 ----          --------->GLK1(2)            --------->ATERF1(2)  --------->AHL20(2) <---------ETT(1)  ----         <---------GLK1(2)--------->TOE2(3)          <----------ID1 --------->ANAC58     <-----------HVH21 -------GT1       --------->AHL20(1)  --------->RAP2.6(3)   <---------AHL20(2) --------->ANAC46------   acaaaactacatattctgaaaatattaaccttgagtttaggccggctatgctataacgaaaaataaataaaagcaactaacccgacagaaatgtcaacca  30388200                                                            ------>MYB46(1) -------MYB52(2)                                            ------>MYB83                          --- ------>MYB46(3)                                         --------->ANAC58                         <-- ---MYB55(2)                                             --------->ANAC58                      ------ -->MYB46(3)          --------->REM1(2)                  --------->ANAC46                     <------ ->ANAC58            --------->ALFIN1              --------->YAB1                             ------- ->ANAC58           ------->MYC3                --------->WOX13(1)                           -------- >WOX13(1)          <-------MYC3      <---------YAB1   --------->ANAC46                      -------- -->MYB83        --------->MYB52(1)--------->AHL20(2)  --------->ANAC58                     --------- -->MYB46(1)   <---------MYB52(2)  <---------YAB1 <---------ATHB12                 --------->YAB1---- ->GAMYB----------->GT1            <---------AHL20(2)  --------->ANAC58       --------->AHL20(2) ----   actatccaaaatgaaaaacaaacgtggagagcgtcatattattagtaggccaatcacacaccaaatgtttgtttaacaaaaaaaataagaatgtcaacca  30388300                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                             <-------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                           <---------LBD16                                                                                          --------->ALFIN1                                                                                      <---------ANAC55(2)                                                                                      --------->ANAC55(2)                                                                                      <---------ANAC58 ------>MYB46(3)                                                                      <---------ANAC58 -------MYB52(2)                                                                      <---------ANAC55(1) ->GAMYB                                                                              <---------ANAC46 ---MYB55(2)                                                                         <-------TEIL  -- -->MYB46(3)                                                                       <---------ARR14(2) ->ANAC58                                                                          --------->ARR14(2) ->ANAC58 --------->AHL20(2)                                                      ------>MYB83    <-- >WOX13(1)<---------AHL20(2)              <---------ARR11(3)                      ------>MYB46(1)---- -->MYB83--------->AHL20(2)    <---------TOE1(2)                                <---------MYB59 ----- -->MYB46(1)                   <---------TOE2(2)  --------->TOE2(3)     --------->ATHB12--------->ALFIN1   actatccaaaattaaaatcaagaatacatttcatatgtttccaatatgtttttcttaaacaaaattgggactaaagattggaccaaatacgtgtgcgggt  30388400 ------->TCP20 ------->TCP16(1) --------ARR14(2) ------->TCP11(2)                                                                                  -- ------->ARR14(2)                                                                           <-------MYC3 --------PCF2                                                                               ------->MYC2 --MYB46(3)                                                                                 ------->PIF4 -ANAC58                                                                                    ------->PIF5 -ANAC46                                                                             ---------->DOF2 -ANAC58   <-----------------------TaNAC69(2)                             <---------ANAC58  ------->MYC3 ------->PCF5                                                             <---------ANAC46  <-------MYC4 -------TCP16(2)                  --------->DAG2 --------->YAB1           <---------ANAC58  <-------MYC2 ----->WRKY38(1)                 ---------->DOF2<---------YAB1      <---------AHL20(2)      <-------PIF5 ---->ALFIN1       <---------ANAC46----------->GT1       --------->AtMYB61<---------AtLEC2  <-------PIF4   ggacccgatagaagccgagttgagtctaaagactaaaaagtaaacaaaaaatgataagaccatcacttagtttattgcatgaaaatgaaaagcacatgct  30388500                                                                --------->ARR11(3)                                                                --------->GLK1(2)                                                                <-----------ARR10--------->MYB46(3)          <---------At4g35610                     ----------->TBP               ------------>CBF ----          --------->At4g35610 <-----------GT1   --------->AHL20(2)     <-----------GT1        ------- ---->ZmHOX2a(1)  <----------DOF2 ------>ZmHOX2a(1)             <---------ARR11(3) *TSS      --------   cctctctctctcttctgcctctttccatctagtttcctcttaaaactccattatatatagaaacaaaatcttttctctcttcaacaatcccaccattaaa  30388600                                                              --------->HSFC1(2)                                                              <---------HSFB2a(1)                                                              --------->HSFB2a(1)                                                              <---------HSFC1(2)                                                             --------->ARR14(2)                                                          --------->HSFB2a(2)                                                          --------->LBD16                                                         <---------ANAC55(2)                                                         <---------ANAC46                             ------->TEIL              --------->MYB52(1)                             <---------ARR11(1)       <---------SPL7                            <---------GLK1(2)       --------->ZAT2             <------ZmHOX2a(2)                      <---------ZAT2            <---------ARR14(2)                      <---------At4g35610       --------->TOE1(2)    <---------CCA1(2)       --------->At4g35610 ------>DOF2--------->ARR14(2)                   ------>ZmHOX2a(1)                   --------->ANAC58 -->AHL20(2)<---------ARR11(3)                  --------->TOE2(3)    <---------ALFIN1--------->ANAC58 ->AHL20(2) --------->ARR11(3)           <----------DOF2<---------LBD16     <-------TEIL     <-------   aaagaagaacccaagatcgactcttacttcgaatctctctcaactttcttcctcagcttacgggaacttccacacatatacatccacaagaacccatatc  30388700                                                                           <---------ANAC58                                                                     --------->ATHB12                                                                    <---------YAB1                                                                ------>ZmHOX2a(2)                                          <----------DOF2      <------ZmHOX2a(2)                            --------------->AtSPL3            <---------ARR11(3)                           ====================HOX2a_HOX2a    <---------AGP1 <---------MYB52(1)                     <---------AtLEC2   ===============================HOX2a_HOX2a         ------>ZmHOX2a(1) <------ZmHOX2a(2)<---------AtMYB61 --------->ARR11(3)         =========================HOX2a_HOX2a           --------->ATHB12   <---------ANAC58   <-------TEIL    <---------AHL20(2)   ==============================HOX2a_HOX2a --CCA1(2)     <---------AHL20(2)       ------>ZmHOX2a(1)    <---------CCA1(2)  <---------ANAC46   --   gaagattcatcctacatatatttacatggatcagtactcatcctctttggtcgatacttcattagatctcactattggcgttactcgtatgcgagttgaa  30388800            --------->ANAC58            --------->ANAC58           --------->SPL7           <---------ZAT18         <---------SPL7         <---------MYB52(1)     --------->MYB52(1)                                                                        ------    <---------ALFIN1                                                                           <-----   --------->MYB46(3)                                                                     <---------ICU4  <------ZmHOX2a(2)                                                                       --------->YAB1  --------->CCA1(2)                     <-------MYC3                  <----------DOF2     <--------HAHB4 <---------ARR14(2)                     ------->MYC3          --------->YAB1             <---------ATHB12 <---------ARR11(3)                  <---------ALFIN1        <---------YAB1              --------->ICU4 --------->ARR14(2)      --------->GLK1(2)                 --------->YAB1                <---------YAB1 --------->AGP1         <---------GLK1(2)                  <---------ICU4          <-----------ARR10 --------->ARR11(3)     <---------ARR14(2)                --------->ICU4          <---------CCA1(2) --------->ARR10        --------->ARR14(2)                <---------ATHB12<---------AHL20(2)---------   gaagatccaccggtacgcttctctcagattcttcattctccacatgttcagaaattttcaattatcatggagctttttaatctagtatctcatcattatg  30388900                           <------MYB83                           <---------MYB46(3)                           <------MYB46(1)                          <---------AtMYB61                         <--------P                         <---------MYB55(1)                         <---------MYB52(1)            <---------MYB52(2)                           <                        <---------MYB52(1)<---------AHL20(2)                                        < --->ANAC55(2)          <-------GAMYB  <---------AHL20(1)                    <---------At4g35610   -- ----ANAC55(2)        --------->MYB59  --------->AHL20(1)                    --------->At4g35610   <- >ICU4         <-----------GT1        --------->AHL20(2)              <---------AHL20(2)   --------->YAB1   tattatacacttacatttttcaattcggttggttttgaaaatatataaactaactcaactatccatagacatttttttcagatgtataatctataaacat  30389000                                    <---------WOX13(1)                                  --------->ATHB12                                 <---------AHL20(2)                                 --------->AHL20(2)                           --------->AHL20(2)                                         <---------DEAR3(2)                         <---------AHL20(2)                                           <------MYB46(1)            --------->ANAC46     <---------YAB1          ----------->GT1             <---------MYB46(3)    <---------AHL20(2)   --------->AHL20(2)              --------->ANAC58         <---------ANAC46 ---------CCA1(1)     <---------AHL20(1)                 --------->ANAC58        <---------AtMYB61 ---------RVE1(1)     <---------ARR11(3)       <----------DOF2      <---------MYB52(1)<------MYB83 ------->ARR11(3)     --------->ARR11(3)       --------->TOE1(3)   --------->TOE2(3)<---------ANAC46 --------ARR11(3)     --------->AHL20(1)       --------->TOE2(3) <-------TEIL    --------->ALFIN1   agatattttcttatacttcacaaatatttttatatataattggcataaactttaacaacaagaaaaattcgttagtaattcatgtggtgggttcttgaaa  30389100  Previous    Next  AGI:  At1g80840.1    Description:  WRKY40 (WRKY DNA-binding protein 40); transcription factor. Identical to Probable WRKY transcription factor 40 (WRKY40) [Arabidopsis Thaliana] (GB:Q9SAH7); similar to WRKY18 (WRKY DNA-binding protein 18), transcription factor [Arabidopsis thaliana] (TAIR:AT4G31800.2); similar to WRKY18 (WRKY DNA-binding protein 18), transcription factor [Arabidopsis thaliana] (TAIR:AT4G31800.1); similar to transcription factor wrky [Brassica napus] (GB:ABA71354.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 30388583    to: 30390391    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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