Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          ------>ZmHOX2a(2)                <---------ZAT6                       <---------AHL20(2)                        --------->ARR14(2)                       --------->AHL20(2)                        <---------ARR14(2)                   ============================HOX2a_HOX2a    <---------ANAC46                   <------ZmHOX2a(1)  <---------ARR11(3)      <---------ANAC55(2)                 --------->MYB59      --------->ARR11(3)      <---------ANAC58         <---------AHL20(2)  <---------YAB1                   --------->ANAC55(2)                 <--        --------->AHL20(2) <---------AHL20(2)         ----------->GT1    ----------->GT1          <-- --->GT1<---------AHL20(2)<---------AHL20(2)    <-------TEIL  <---------ANAC58                -------   tataaacttattaattagttaggaattttttatttttgttgatcttaaaattcatttagtaatttcgtattcgaagtgttataacttaaaaaaaaacatt  30375100                         ----------->GT1                 <-----------GT1                  --------->AHL20(1)                   <---------WOX13(1)<----------DOF2         ----------->GT1<---------TOE2(3)           --------->AHL20(2)  <---------ANAC58 -------TOE2(3)   --------->AHL20(2)                <---------AHL20(2)  <---------ANAC58 -------TOE1(3)   <---------AHL20(2)              <----------DOF2      ---------->ID1             --- -->TOE2(3)    --------->YAB1---------->DOF2  <---------ALFIN1   <---------YAB1    ------->TEIL  <---   aaggttccatatggcaaaaataaaataatgtaaaagtccgattcacaaacacctttaattgaccattttgtttggctttttaatgcatttacacttatca  30375200                                                                     <---------AHL20(1)                                                                     <---------AHL20(2)                                                                     --------->AHL20(1)                                                            <----------DOF2                                                         <---------AHL20(1)                                                         <---------ARR11(3)                 <--------                                                         --------->ARR11(3)           ------>MYB83                                                         --------->AHL20(1)           ------>MYB46(1)                                                        --------->CCA1(1)           <---------MYB46(2)                                                 ----------->GT1     --------->AHL20(2)   <---------ALFIN1 ------>TOE2(3)<---------TOE2(3)       <---------TOE2(3)--------->RVE1(1)           <---------MYB59 ------ANAC55(2)   ------->TEIL <---------ZAT6--------->TOE2(3)--------->YAB1    <-----------GT1 <---   cctaaaactttgaaactaatgtacttctctagtactgttctaagataaacttagtaaaatatctttcacaataaattcttcatttaccaaacccacactc  30375300                                                                                            ---------                     <-----------GT1                                                        <--------                    --------->AHL20(1)                                                  ------>MYB46(1)    <---------AHL20(1)                                                        --------->WRKY38(1)    --------->AHL20(1)                           <----------DOF2      <---------YAB1    ------>MYB83    <---------ARR11(3)                    <---------MYB52(1)        --------->YAB1      -------->P -ALFIN1--------->YAB1        ---------->DOF2 ---------->ID1 ---------->DOF2  --------->WRKY12 -------DOF2     --------->AHL20(2)  <-----------GT1    ---------->DOF2--------->YAB1 --------->MYB46(3)   tttcaatatatcagaacaaaaatatactaatctaaagtttttcagtttgttcttttgaaaaagaaaagaattatcataagttgactcaccaactctttac  30375400                                                  --------->bZIP60(2)                                             --------->ANAC58          <---------ANAC58                   --------->ANAC46          <---------ANAC58                   --------->ANAC58     ----------->GT1                     <---------MYB52(2)     <---------ANAC55(2)              <---------ATHB12     --------->ANAC55(2)            --------->ANAC46 --------->YAB1 -------------->TaNAC69(2)      <-----------GT1 <---------ALFIN1*TSS          <----------DOF2 --DOF2 <-----------GT1     ----------->TBP--------->MYB52(1)   --------->ZAT14  --------->YAB1   catggttaagtaacttgttttgaagtctctatatatacaaatcactaacgacacatcataacatactactctcttaagccctttcataaccttgtaaacc  30375500                                                                             --------->ATERF1(1)                                                                             <------NtERF2                                                                            <---------DEAR3(2)                                                                            ------>NtERF2                                                                            <---------ATERF1(1)                                                                            <---------RAP2.3(1)                                                                            <---------MYB46(3)                                                                           <---------ANAC46                                                                           --------->ATERF1(2)                                                                          --------->ATERF1(1)                                                                          <------NtERF2                                                                          --------->RAP2.3(1)                                                                         <---------ATERF1(1)                                                                         <---------DEAR4(2)                                                                         <---------ORA47(2)                                                                         <---------RAP2.3(1)                                                                         ------>NtERF2                                                                         --------->LBD16                                                                        <---------RAP2.3(3)                                                                        <---------DEAR3(1)                                                                        --------->DEAR3(1)                                                                        --------->ATERF1(2)                                                                        <---------ATERF1(2)                                                                        <---------RAP2.6(2)                                                                        <---------RAP2.3(2)                                                                       --------->DEAR3(2)                                                                       --------->ATERF1(1)                                                                       --------->RAP2.3(1)                                                                       <------NtERF2                                                                      ------>NtERF2                                                                      <---------ATERF1(1)                                                                      --------->ZAT2                                                                      <---------ZAT2                                                                     --------->ARR14(2)                                                                     <---------ARR14(2)                                                                   --------->LBD16                                                                 ----------->RAV1(2)                                                                 <---------At4g35610                                                                 --------->At4g35610     <---------ANAC46                                                                 <---------LBD16       <----------DOF2                                                              ----------->HVH21       <---------ANAC58                                            <---------LBD16  <-----------TGA1--------->At4g35610  <--                                     <---------ANAC58    <---------DEAR3(1)<---------DEAR3(1)    <---                           ----------->GT1<---------ETT(2)   <-----------HVH21        <---------ANAC58                 --------->YAB1      <---------ANAC58   ----------->RAV1(2)<---------ATERF1(2)  -----       <----------DOF2    >>>>>>>>>TBF1   --------->ETT(2)  --------->ANAC46<---------ERF1      -----   attaagaggctttgctcaattacaagaagaagaaaaaatgcttgtcgacgggaaactcgtctgcgtcaccggagccggcggctacattgcttcttggatc  30375600                                                  ------>MYB83                                                  --------->MYB52(1)                                                  ------>MYB46(1)                                                <---------MYB59                                               --------->ANAC58                                            <------ZmHOX2a(1)                                          --------->ANAC58                                   <---------ARR14(2)                --------->AtMYB61                                   --------->ARR14(2)                ------->GAMYB                                  ==============================HOX2a_HOX2a                                  <------ZmHOX2a(1)----------->RAV1(2)            <----------DOF2                            <---------MYB52(1) --------->ANAC58     --------->MYB46(3)        ------- -------MYB52(1)           <-----------HVH21====================HOX2a_HOX2a     --------->At4g35610 ----GAMYB             --------->REM1(1)  --------->ANAC58         -------->P  --------->ARR11(3) ------>GT1            <---------ALFIN1  --------->SPL7  ------>ZmHOX2a(2)     <---------ARR11(3)---- ->ZmHOX2a(2)         <---------ZAT14   <---------MYB52(1)       --------->MYB46(3)           -------   gttaagttactcttagagagaggctacaccgttagaggaaccgtaaggaacccaactgatcccaagaacaaccatctcagagagcttcaaggagccaagg  30375700                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                     <-----------ARR10                     <---------ARR14(2)                     --------->ARR14(2)                     <---------AGP1                     <---------ARR14(3)                     <---------ARR11(3)                     --------->ARR11(3)                     --------->AGP1                                   <---------ANAC58                     --------->ARR14(3)                               <---------ANAC46        <------                    <---------CCA1(2)                              <---------DEAR3(1)        --------                   ----------->ARR10   --------->ARR11(3)   <-------GAMYB                    --------                 <---------ZAT14       <---------ARR11(3)  <---------MYB46(3)                --------                 --------->ZAT14     ------->TEIL         <---------DEAR3(1)               <---------At4g35610          <---------REM1(2)       --------->ANAC46      ------------>AtMYB77    XXXXXXXXXXXXXXXXXXXX>MIR408 -->ANAC58--------->ZAT14  <---------HSFB2a(2)         ----------->HVH21       --------->ANAC46 ------>DOF2     <---------ZAT18 <---------------------WRI1<---------DEAR3(2)  <---------ALFIN1 ----- -->ANAC58<---------ZAT14  --------->HSFB2a(2)   ----------->RAV1(1)  <---------ANAC58     --------->At4g35610   aaagactcactcttcacagtgcagatcttctcgactacgaagctctctgtgccacaatcgacggttgcgatggcgttttccacactgcctctccgatgac  30375800        <---------MYB52(1)       --------->LBD16      --------->ANAC55(2)      --------->ANAC46      <---------ANAC55(2)   <------ZmHOX2a(2)                           --------->ZAT14  --------->ARR14(2)                           <---------ZAT14                                      <  <---------ARR14(2)                         <---------YAB1                               <---------- ---WRKY18(1)                      <---------ANAC46                                       ------->TEIL --->HVH21                         <---------ANAC58                                   <---------TOE2(3) ->WRKY38(1)                       <---------ANAC58                                 <---------AHL20(2) ->WRKY12                         --------->ATHB12                                 --------->AHL20(2) ---->DEAR3(2)                  <---------MYB52(1)                                 <---------AHL20(2)   cgacgatcccgtaagtagacaattctattaatcggttgagtggtattagtatagtactcatgttttcttagttttcattttctaaattaatgtaactaat  30375900                        --------->MYB52(1)                       <---------WRKY12                       --------->ZAT14                                               --------->bZIP60(1)                       <---------ZAT14                                               --------->ANAC58                       <---------WRKY38(1)                                           --------->ANAC46                      ----------->HVH21                                              --------->O2                     <------NtERF2                                                   <---------ANAC55(2)                     --------->At5g28300                                             <---------O2                    <---------MYB46(3)                                               <---------bZIP60(1)                   <---------DEAR3(1)                                                --------->ANAC58                  <------NtERF2                                                      --------->ANAC55(2)                  --------->ATERF1(1)                                                ================                  <---------ABI4(1)                                                  ================                 ------>NtERF2                                                       --------->ANAC55(1)                 <---------DEAR4(2)                                                  --------->TGA1a                 --------->LBD16                                                     <---------TGA1a                 <---------ATERF1(1)                                                 --------->bZIP60(2)                <---------RAP2.3(3)                                        <-------PIF5                --------->DEAR3(1)                                         ------->PIF5                <---------ATERF1(2)                                        <-------MYC3                <---------RAP2.6(2)                        --------->ANAC58------->MYC3                <---------DEAR3(1)                 <---------At4g35610     ------->MYC2            --                --------->ATERF1(2)                --------->At4g35610    <---------ANAC58         <-                <---------RAP2.3(2)            --------->ANAC46     ---------->DOF2 <-----------STF1               <------NtERF2                ----------->HVH21       ===========================bZIP_DOF               --------->ATERF1(1)       --------->ATHB12  --------->ANAC58<-------MYC2--------->TGA2(2)               --------->RAP2.3(1)      <---------YAB1   ---------->DOF2  <---------ANAC46         <-               --------->DEAR3(2)     <---------ANAC58   ======================================bZIP_DOF              <---------ATERF1(1)     <---------ANAC58--------->At4g35610 <---------ANAC58     <----- ------ZmHOX2a(1)<---------RAP2.3(1) <-------TEIL  <------NtERF2   --------->WRKY18(1)<-----------TGA1 -GT1  <-----------RAV1(1)    ------>NtERF2<---------WOX13(1)     <-----------HVH21<-----------GT1 --   taggagacaatgttggagccggcggtgaacggagccaagttcgtgattgacgcagcggctaaagccaaggtcaagcgcgtggttttcacgtcatcaattg  30376000  Previous    Next  AGI:  At1g80820.1    Description:  CCR2 (CINNAMOYL COA REDUCTASE). similar to CCR1 (CINNAMOYL COA REDUCTASE 1) [Arabidopsis thaliana] (TAIR:AT1G15950.1); similar to cinnamoyl-CoA reductase [Populus trichocarpa] (GB:CAC07424.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 30375464    to: 30377562    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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