Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <-----------GT1  <---------ICU4  --------->YAB1 --------ICU4 -------YAB1 ------>ICU4 ---->YAB1 ----YAB1 -->ARR11(3)   <---------ANAC58                             <---------ARR11(3) ---ARR11(3)   <---------ANAC46             <---------AHL20(2)     ---------->DOF2 ->CCA1(1)     <---------ANAC58            --------->AHL20(2)   ----------->GT1 ->RVE1(1) <----------DOF2 <---------AHL20(2)               --------->ARR11(3)          <-----------GT1   ataatcaatataactttgcgtttattcatttttttcttacaactatataatatgatgtacaagatgttgtaaagactataaacttaagagttacaagttg  30336400                                                                                                    <                                                                                                    -                                                                                                <----                          <---------AHL20(1)                                                  -------                          --------->AHL20(1)                                   <---------AHL20(2)   <                          <---------AHL20(2)                          --------->TOE2(3)      <-------                    <----------DOF2                                   --------->TOE1(3)      <-------                <---------CCA1(2)          <---------ANAC58    <---------MYB46(3)     <-----------GT1            <----------DOF2--------->CCA1(2)                 <---------MYB52(1)--------->AHL20(1)   -  ---------->DOF2   --------->TOE2(3)      <---------ANAC58 <----------DOF2    --------->AHL20(2)----   tatgaaaagttcaactttctatctttaatatatgaaatattagaggcctgccactaatttgcctttggttaaccttcaaaataaaatgtttccctatcat  30336500                 --------->AHL20(1)             <---------YAB1            --------->AHL20(2)            <---------AHL20(2)        <--------HAHB4        --------->ATHB12        <---------ICU4       <---------ATHB12       --------->ICU4     <---------ICU4     --------->YAB1    --------->ICU4  --------->YAB1 <---------AHL20(2) <---------YAB1  --------->AHL20(2) <---------AHL20(2)                                         --------->ZAT18 ---------AHL20(1)                                    --------->TOE2(3) -------->AHL20(1)                                  --------->ARR11(3) -----YAB1<---------YAB1         <----------ID1     <-----------ARR10 -->YAB1--------->YAB1           ----------->GT1    --------->AHL20(1) ---------AHL20(2)              ----------->GT1     <---------AHL20(1)          ----------->GT1 --YAB1<---------YAB1          ----------->GT1      <---------ARR11(3) --------->GLK1(2) --------->AHL20(2) --ATHB12--------->TOE2(3)  ---------->DOF2  ----------->GT1<---------ZAT18---------->DOF2   -------- -------->AHL20(2)  <---------WOX13(1)      --------->DAG2--------->At4g35610 <---------At4g35610 ----->AHL20(2) --------->AHL20(2)        ---------->DOF2 <---------At4g35610 --------->At4g35610   aatataataatcattaaaattaattgaacagaaaggggaaaaaaaaaaggtcaatatcttagctcacaaatagaatccaaagctgaaaaaaaaaaatgaa  30336600                                                                          <---------At4g35610                                                                          --------->At4g35610                                                            <---------AHL20(1)                                                            <---------AHL20(2)             --------->O2                                                   --------->ATHB12---------->DOF2         --------->TGA1a                                                  <---------YAB1   ==================================bZIP_DOF                                              ------>MYB46(1)   <-----------GT1       ----------->HVH21                ----------->GT1               ------>MYB83  --------->AHL20(1)    <---------YAB1               --------->DAG2               <---------MYB59 --------->AHL20(2)  --------->YAB1  --------->MYB52(1)                   --------->YAB1<---------WOX13(1) <-----------RAV1(2)<---------O2 --->GT1     ---------->DOF2 <---------MYB46(3)   <---------AHL20(2)  <-----------HVH21    <---------TGA1a   aaacaaactgaaaacaaaaggtaacaaatatttgttgacaaacataccaaatttgattgaaatttattacaaagtcagatgatcacaattgacacatgag  30336700                                                          ------>ZmHOX2a(2)                                                          <---------LBD16                                                         <------ZmHOX2a(2)                                                         --------->CCA1(2)                                                        --------->ARR11(3)                                                        --------->AGP1                                                        <---------GLK1(2)                                                        <---------ARR14(2)                                                   <-----------HVH21                                                --------->SPL7                                              <---------SPL7                                            --------->ANAC58                                            <---------------AtSPL3                                            --------------->AtSPL3                                           --------->SPL1(2)                                         <---------MYB52(1)                                        --------->LBD16 --------->ARR14(2)                                       --------->ANAC46<---------At4g35610                                      <---------LBD16 ----------->ARR10      ------>MYB46(1)                               --------->TOE1(3)--------->SPL1(2)   <---------ANAC46                              --------->ZAT6--------->ANAC58    <------------CBF                           <---------ATHB12--------->SPL7--------->ARR14(1)  ------>MYB83                       ------------>CBF<---------------AtSPL3<---------MYB52(1)--------->TOE2(3)                       --------->MYB46(3)<---------SPL7--------->At4g35610  ----------->RAV1(1)                   ------>ZmHOX2a(2) <-----------------AGL1 --------->LBD16--------->AtMYB61    <----   agtcttaaattcgctatctgatcgaaccaataaccctagacccggtacggtacggtcagatccggttattgtggagaccaacattagcctcaagaccgcg  30336800                                                      <------NtERF2                                                     ------>NtERF2                                                    <---------LBD16                                                   <---------LBD16                                                 <---------TGA1a                                               <---------TGA2(2)                                               <---------ATERF1(1)                                              ----------->TGA1                                              ----------->HVH21                                <-----                                            <---------ZAT2                            ------->PIF5                                            --------->At4g35610              <-----------RAV1(2)                                            <---------At4g35610             <------NtERF2  <---------LBD16                                       <---------WOX13(1)    <------ZmHOX2a(2) <---------At4g35610                <---------ANAC58     --------->ATHB12--------->LBD16      --------->ANAC46--------->PCF5                <---------ANAC58    --------->ICU4 <------NtERF2    --------->ATHB12  <-------PIF5                <---------ANAC46    <---------YAB1<---------RAP2.3(1)    <---------LBD16 <---------SPL7              *TSS                  <---------ZAT6------>NtERF2    <---------YAB1   <-------TEIL ------DOF2 <------------CBF--------->LBD16 --------->ZAT2  --------->ARR11(3) <------NtERF2 --------   ttttgaaacgctcatattgtgtggaaaatgcgcgagtagtgattggagctgacgccgggagagatcaagatgattcgcggcagaggctcgtggtccggat  30336900                                    <---------ZAT14                                    --------->ZAT18                                    <---------ZAT18                                    --------->ZAT14                              <---------ANAC58                                <---------ARR14(2)                               <---------ANAC46                                --------->ARR14(2)                               <---------ANAC58                             <---------O2                                   <---------ANAC58                             --------->O2                                   <---------ANAC58                          ----------->HVH21                           --------->GLK1(2)                         --------->DEAR3(2)                       --------->ANAC46            <------       <-------GAMYB     --------->MYB46(3)                       --------->ANAC58   ----------->HVH21      --------->LBD16  --------->ARR14(2)                         --------->ANAC58  <-----------HVH21    <---------LBD16    <---------ARR14(2)                  <---------HSFB2a(2)   --------->ANAC55(2) ----GLK1(2)          <------ZmHOX2a(1)  ---------->DOF2   --------->HSFB2a(2)   <---------ANAC55(2)- ->LBD16       <----------DOF2--------->HSFC1(2)   <---------KAN4(2) <---------GLK1(2)      ---------   tatcgacccggttgaagctttacaggacccgacgtttctgcacaaaaggagagaataaactcgagaagacggaatctagcgttgcgcatcacagcgacac  30337000                                                                        ------>ZmHOX2a(2)                                                                       <------ZmHOX2a(2)                                                                      <---------ARR11(3)                                                                      <---------ARR14(2)                                                                      --------->ARR14(2)                                                                      <-----------ARR10  --------->MYB46(3)                                                                      --------->ARR14(3)--------->ANAC58                                                                      <---------ARR14(3)------>MYB46(1)                                                                    ----------->ARR10   ------>MYB83                                                                 <---------ANAC46       --------->ANAC46                                                                ------>NtERF2         --------->AtMYB61                                                             --------->At4g35610      --------->DEAR3(1)                                                             <---------At4g35610      <---------ALFIN1                                                          <---------At5g28300     --------->ZAT14                                                          <---------DOF5.7(2)   --------->ANAC46                                                        <---------MYB52(1)   --------->ZAT18      <---------ZAT6                                    --------->DOF5.7(2)  <---------ZAT14 ---ALFIN1                                            <---------ANAC58<---------AGP1 --------->MYB46(3) ------>TEIL                    --------->ANAC46      <---------ANAC58--------->ARR11(3)--------->ANAC58 -->RAV1(1)  --------->ANAC46  --------->YAB1  xxxxxxxxxxxxxxxx>smallRNA(i)  --------->ZAT14    <----   tgaatctagtgtttctcgctacgatgagacctataagaaactcgataagctcgatttcgttaccgctgcgaagatcttgttcactgaaccacccaagaag  30337100                                                                                       ------>ZmHOX2a(1)                                                                                       <----------DOF2                              ----------->GT1                                       ---------->ID1                         --------->CCA1(2)                                      ==============HOX2a_HOX2a                        <---------ARR14(2)                                      ------>ZmHOX2a(2)                        --------->ARR14(2)                                    --------->ARR11(3)                      ----------->ARR10                                       <-----------ARR10                    --------->LBD16                       <---------ANAC58    <---------ARR14(2)                  <---------LBD16                         <---------ANAC46    <---------ARR11(3) ------ID1       --------->MYB52(1)---------->DOF2        <---------ANAC58<---------At4g35610     ---   aacaaatttgggtaatttctaccggagatttggggtttaaagagggttctactctcgaatgcgtgcaaacactcttcgctgatcttgtcctttgtttagt  30337200                                                                               <---------CCA1(2)           --------->YAB1                                                  --------------------->WRI1   <---------At4g35610                                           <-----------GT1                   <-   --------->At4g35610                             ---------->DOF2       -------->P         <-------- ------>WOX13(1)       <-------TEIL          <---------ATHB12  <---------AHL20(2)        ----------->GT1   ctatcagatgctataatgtgtttgattcatgcttctataggccttaaatcatggaaagaccctattttttcaacttaccttgtatattttgaagttaatt  30337300  Previous    Next  AGI:  At1g80700.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G80980.1); similar to unknown [Picea sitchensis] (GB:ABK25947.1) Range:  from: 30336814    to: 30338292    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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