Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    <                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                       <-----------HVH21     <-------                                --------->At4g35610        --------->HSFB2a(2)               <-------                                <---------At4g35610        <---------HSFB2a(2)               <-------                           <---------GLK1(2)         ------>ZmHOX2a(1)<---------bZIP60(1)    <-------            --------->ATHB12--------->GLK1(2) <---------ARR14(2)      --------->bZIP60(1)   <-------TEIL           <---------ATHB12--------->ARR14(2) ------->TEIL <---------LBD16             ---------->DOF2         ------>MYB83 --------->AtLEC2        --------->ARR14(2) <---------DOF5.7(2) --------->ANAC58         ------>MYB46(1)   <---------ARR14(2)<---------CCA1(2)   --------->MYB52(1)  --------->ANAC58   tgatggaaaccaaatgatttgttcatgcagattcttctgaatcccttgtatcttcctggttctcggataacgtcgtcacattttgacaccaaagtacgtg  30277300       ---------->DOF2     --------->ANAC58     --------->ANAC58 ------>PIF5 -------PIF5 -----ZAT14                                   <------MYB83 ---TEIL                           <---------YAB1 ---->ZAT18                     --------->GLK1(2) ---->ZAT14                    <---------GLK1(2)                       <---------CCA1(2) -----ZAT18                    --------->ARR14(2)                 ------->TEIL --ANAC58                      <---------ARR14(2)             --------------->AtSPL8 --ANAC55(2)                  --------->HSFB2a(1)            <---------ANAC58 --ANAC46                     --------->GLK1(1)              <---------ANAC46          --------->ANAC58 --ANAC58   ------->TEIL     ----------->ARR10<------MYB46(1)<---------ANAC58          --------->ANAC58   cacttgcaagaaagtacctgtagagaagacggagattctgtttgcatttggtgatcaaatttttcttgtacccatatcgcatagttcccaagtcaattgt  30277400                                                           --------->YAB1                                                        --------->YAB1                                                       <---------YAB1              <---------YAB1                                                      --------->AHL20(2)<---------ANAC46                                                      <---------AHL20(2)--------------->AGL15                       <---------GLK1(1)     --------->ANAC58           <---------ANAC58             <---------ANAC58                --------->ANAC58           <---------ANAC58          ---             <---------ANAC58<---------MYB52(1) ----------->RAV1(1)  --------->GLK1(1)    --------->ICU4       <----------DOF2 --------->GLK1(1)     --------->ANAC46       <---------GLK1(1)     <---------YAB1   ttctgttttctttttgagtgcctggatttctgttatttctaacttgcaagcaacattttaataagaatgggattccttgtttagtatgagtaatgaatga  30277500                           <-------GAMYB                           <---------ANAC58                           <XXXXXXXXXXXXXXXXXXXXMIR3932A/B              --------->AHL20(2)              <---------ICU4 <---------MYB46(3)                                               <------             <---------AHL20(2)    --------->YAB1                                             -------             --------->AHL20(2)   <---------YAB1                                             <-------            <---------AHL20(1) <---------YAB1              --------->GLK1(2)          <---------TOE2(1)            --------->AHL20(2)<-------GAMYB               <---------GLK1(2)           <---------TOE1(1)           --------->YAB1  <---------ANAC58           ------>ZmHOX2a(1)          <---------------AtSPL8  <---------ATHB12        <---------MYB46(3)    <----------DOF2                <-------TEIL ------->TEIL --->ZmHOX2a(2)        <----------DOF2---------->DOF2--------->TOE2(3)     --------------->AtSPL3<---   tccattcaatccaaaataatttcatctttggttgttattataaagtctctcttttcctcagaatctattggaaaacaagcgtacatgtacgatgtatatc  30277600                                                                    <------MYB46(1)                                                                    <------MYB83                                                                   --------->MYB59                                                                   --------------->AtSPL3                                                                   --------------->AtSPL8                                                                   --------->MYB111(1)                                                                   --------->MYB46(2)                --------->ANAC58                         --------->LBD16                ------->GAMYB                            ------------>CBF                --------->ANAC58                        --------->ANAC58              ------>MYB46(1)                           --------->ANAC58              ------>MYB83                             <---------LBD16      <------------CBF      --------->YAB1                                 <---------ARR14(2)  <---------DAG2      <---------ICU4                           <---------WOX13(1)  <---------------AtSPL8 --------->HSFB2a(2)                          <------------CBF<---------AHL20(2)                    - <---------HSFB2a(2)   --------->YAB1       <---------AHL20(2)--------->AHL20(1)                    < ---ARR11(3)  --------->MYB52(1)            <---------YAB1    <---------AHL20(1)                  --- -->ARR11(3) --------->MYB55(1)             --------->AHL20(2)--------->AHL20(2)                 ---- --CCA1(2)  <---------MYB59              <----------DOF2--------->ANAC46 <----------DOF2============= -------DOF2--------->MYB46(3)     ----------->HVH21 --------->ARR14(2)<-------TEIL     ---------->DOF2   tttctgaaacatgaccaaacgcctaacataagttaatgtgacacttttaattgctaatccgcaattaattaggtactttattgaagtttaaaaagacgat  30277700                   <---------TGA1a         ====================bZIP_DOF         ---------->DOF2                                                                           <-     <---------AHL20(2)                                                                       -------     --------->AHL20(2)       ---------->DOF2        --------->HSFB2a(1)                      -------    <---------ATHB12<-------MYC3         *TSS   --------->CCA1(2)                             <------    --------->AHL20(2)    ----------->GT1--------->YAB1                                       <------  --------->WOX13(1)------->MYC3       ------>MYB83  --------->HSFC1(2)                      <------NtERF2 --------->AHL20(2)--------->TGA1a     ------>MYB46(1)                                      ------>NtERF2 ----------->CBF   --------->O2        --------->MYB52(1)                                  --------->At1g77200 ---------ATHB12   <---------O2      --------->AtMYB61                                     --------->DEAR3(1) ------>WOX13(1)   ======================bZIP_DOF    <---------HSFC1(2)<---------CCA1(2)   ---------- ----->AHL20(2)  ----------->RAV1(1)------------>CBF <---------HSFB2a(1)                  --------->DEAR3(2) ============================bZIP_DOF--------->MYB46(3)      XXXXXXXXXXXXXXXXXXXXX>MIR402<---------ATERF1(1)   taatcaattaataaagaggccacatgtgaagtaaaagcaccaatcggaagatagaagtttcccaaaacttatcaaatctctgtgtatcgctcgccgacga  30277800  <------ZmHOX2a(1) ----------RAV1(2)           --------->TOE2(3) -->TGA1a                <---------WRKY18(1) -->O2                  --------->WRKY12 ---TGA1a               --------->WRKY45                                                    --------- ---O2<------ZmHOX2a(1) --------->WRKY38(1)                                             --------->YAB1 ->HVH21               --------->DOF5.7(2)                                             <-------TEIL   ggcaggaaggacgaccaattgagacgttgacccttaatccgatttgaacaatctctctctctctctctctctctctctcttggtcgagattcataaaagt  30277900                                                                                 ------>ZmHOX2a(2)                                                                                <------ZmHOX2a(2)                                                                               <---------ARR14(2)                                                                               <---------AGP1                                                                               --------->AGP1                                                                               <---------ARR11(3)                                                                               --------->ARR14(3)                                                                               --------->ARR11(3)                                                                               --------->ARR14(2)                                                                               <---------ARR14(3)                                                                               <-----------ARR10                    <---------LBD16                                           <---------CCA1(2)      <---------ANAC58                                                        <---------ARR14(1)   --      <---------ANAC58                                          --------->AHL20(2)   <---------ANAC58   <----------DOF2 ------>ZmHOX2a(2)                         --------->YAB1  ----------->ARR10     <- <------------------------ANAC81---------->DOF2     <----------DOF2        <---------At4g35610     <- ->DOF2 ---------->ID1       --------->YAB1     <----------DOF2 <---------AHL20(2)   <---------ANAC58   ctcttctttcgtcttcttcgatctcggataatcacaaagtttatcttcttctttcttttttaaaaataaaatcagagagcagatcttgcgaatggatagc  30278000                                                <-------GAMYB                                                --------->At5g28300                                            --------->MYB52(1)                                            ------------>AtMYB77                                   --                                           --------->DEAR3(1)                                    <---              <---------HSFB2a(2)   --------->HSFB2a(2)                                       <------              --------->HSFB2a(2)   <---------HSFB2a(2)   --------->GLK1(1)                   <------      <-----------HVH21     <---------MYB52(1) <---------MYB46(3)                   --------->At4g35610 ------->ARR14(2)         <---------ANAC46 ----------->HVH21               <---------ANAC58   ------- --------MYB52(1)        <---------TOE2(3)--------->MYB46(3)               <---------ANAC58---------- --------ARR14(2)        <---------TOE1(2)--------->DEAR3(2)   --------->LBD16      <---------At4g35610   agttactctgtcatttccaaaacttcttacgttgagttacagaaaccgacggttaatgggaaacccagaaacaagttgcttccttctgatgaagaaagct  30278100     --------->YAB1              <---------ANAC58     <--------ATHB1              <---------ANAC46    <---------ATHB12             <---------ANAC58    --------->ICU4          --------->ALFIN1 <<<<<<<<<WRKY18    --------->ANAC58                                           ------>MYB83 ------->TOE2(3)    --------->ANAC46                             <-----------HVH21 ----TEIL           --------->ANAC55(2)   --------->ARR11(3)    <-----------RAV1(1) ---HSFB2a(1)       --------->ANAC58 --------->ALFIN1------>ZmHOX2a(2)         ------>MYB46(1) ---HSFC1(2)     ------>NtERF2 <---------ANAC46    --------->ARR11(3)         <---------ALFIN1 -->HSFC1(2)<---------TOE2(3) --------->ALFIN1     <---------ARR11(3)        --------->MYB46(3) >DOF2--------->ARR11(3)    <-----------RAV1(1)<---------At4g35610  <---------At4g35610        <-----   tcgtcaatgattttgacgatgcccgtaatggtgttgggggtgaagatgctgatgatctcgatttcgatgtcgctgattacccactcgttcatggcaaatc  30278200  Previous    Next  AGI:  At1g80500.1    Description:  intracellular transporter. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G20930.1); similar to putative TRAPP subunit [Brassica rapa] (GB:ABL97982.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Sedlin; (InterPro:IPR006722) Range:  from: 30275421    to: 30277560    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g80510.1    Description:  amino acid transporter family protein. similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT3G30390.1); similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT3G30390.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO45006.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 30277741    to: 30279685    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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