Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <---------ARR11(3)                                           --------->ARR11(3)                                         --------->ANAC46                                         --------->ANAC58          ------->TEIL                   --------->ANAC58      <---------TOE2(2)             <---------ARR14(2)      ------->TEIL                  --------->ARR14(2)   <---------ANAC55(2)              ------->TEIL   --------->ANAC58                <---------CCA1(2)   --------->ANAC55(2)           --------->ANAC55(1)   --------->ANAC58              --------->ANAC58  --------->At4g35610 ------->ANAC58                  --------->O2      ------>NtERF2 ------->ANAC58                  --------->ANAC58  <---------At4g35610                            --- ------>DOF2                     --------->ANAC46<---------RAP2.6(2) ----------->GT1             ---- ------>AGL15                    --------->ANAC55(2)            <-----------RAV1(1)        ----------   taagcacgtatgtatatatagatagactaatttccacgtatccaagacattgccgctaactattttttgttgggaaaatttgatttttgttatatgacga  30275000                                                              <---------WOX13(1)       ------>NtERF2                                    <---------ANAC46      --------->REM1(1)                                ------>NtERF2    ----------->RAV1(1)      <-----------GT1          --------->DEAR3(1)  --------->At4g35610     <---------AHL20(2)        ------->GAMYB --->NtERF2               --------->AHL20(2)       --------->ANAC46 ----->ETT(2)            <---------AHL20(2)        --------->DEAR3(1)                    <---------YAB1 ->HVH21              <---------AHL20(2)         <---------ALFIN1               --------->YAB1 <-----   cgacagcgacaccatcaaatttgtttatttatttcggttctcttgttatcccaacgccgcttggattgatatttgtctactatcaaacttcattatactt  30275100                                                          <---------AHL20(2)                                                          --------->ARR11(3)                                                          --------->AHL20(1)                                                          <---------AHL20(1)                                                   ----------->GT1                                                 --------->SPL7                                                 ------->TEIL                                                 <-------TEIL                                                --------->SPL1(1)                                                --------->MYB52(1)                                               --------->TOE1(2)                                               <---------SPL7             ------>MYB83--------->YAB1                 --------->ARR11(3)          <---------------AtSPL3       ------>MYB46(1)   <--------                 <---------ARR11(3)         <------------------SPL14    --------->AtMYB61  --------->ICU4        <-----------GT1         <----------DOF2--------->TOE2(2)<---------YAB1   <---------AHL20(2) -----DOF2   ---------->DOF2   <---------DAG2--------------->AtSPL3     <---------MYB59   --------->AHL20(2)   ttgagcgaattaaccaaaagatttgtaatgacacctttttatttcaaaacgtacggataatattttgtcatagaccaaactatttttttcataaaaatta  30275200                                         <------MYB46(1)                                         <---------MYB46(3)                                         --------->MYB52(2)                                         <------MYB83                                        <---------AtMYB61                                          --                        <------MYB83  <-------GAMYB                                             <---- --------------->AtSPL8 <------MYB46(1)<--------P                                         <---------- -ICU4                <--------P <---------MYB52(1)                                   <----------DOF2   gtctatgtactacatatcaaacttgttggtaattcgttggggttggtttctagtcgtcttcccatctcgttgggactaaaacaacattcttttagccact  30275300                                                                             <----------DOF2                                                                         ===================HOX2a_HOX2a                                                                         ------>ZmHOX2a(2)                                                                        ====================HOX2a_HOX2a                                                                        --------->GLK1(1)                                                                        <------ZmHOX2a(2)                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                                       <---------ARR11(3)                                                                       <---------ARR14(3)         <---------AHL20(2)              ------------>CBF              --------->ARR11(3)      <---------AHL20(2)           ---------->DOF2                     --------->ARR14(3)     --------->YAB1             <-------GAMYB                         --------->At4g35610        <---    <---------YAB1         --------->ANAC58      ------------>CBF     <---------At4g35610       ----- ------->ZAT6    --------->ANAC58  <---------DOF5.7(2)                --------->GLK1(1)         ----- ------DOF2      --------->ANAC58--------->DOF5.7(2)  <------------CBF<---------GLK1(1)         <---- -GT1--------->AHL20(2)    --------->ANAC58 ---------->DOF2        --------->LBD16   ------>ZmHOX2a(1)   ttcactattatataatggaacgaaatgacaagcccgttaaagacccaatagcccaatattgaatcaaaccgcagatcccctttcttcctccaaaattcag  30275400                                 --------->ARR11(3)                              --------->DAG2                       <---------ARR14(2)                        ----------->RAV1(1)                       --------->ARR14(2)                       --------->ANAC58                       ------->TEIL                             --------->ANAC58                       <---------ARR11(1)                       --------->ANAC46                    -                      <---------CCA1(2)                      --------->ZAT14                        <                      <---------ARR14(1)                     <---------ZAT14                     ---- --------HVH21       --------->LBD16                         --------->ZAT18                     ---- ---->ANAC46         *TSS    ---------->DOF2             <---------------AtSPL8                  ---- ---->At4g35610     --------->ANAC55(2)             ------>ZmHOX2a(1)                            <--- -----At4g35610     --------->ANAC46      <---------ANAC46   <---------ZAT18                    <----   gtcacaaacccaaacttctcacccgtatctaaaaagttctcgtggtgtatagtcctaaactagtacacgacagaatcaaacctgtttgaagtatttagca  30275500                                                                                                   <-         --------->ANAC46                                                                        ----  ------>ZmHOX2a(2)                                                                              <--- <------ZmHOX2a(2)              <---------GLK1(2)                                                <--- -------->ARR14(2)            <---------YAB1                                              ------->TEIL ---------ARR14(2)          <---------At4g35610                         ---------->DOF2--------->ANAC58 ----->ANAC58              --------->GLK1(2)                         ----------->GT1   --------->ANAC58 ----->ANAC46             <---------GLK1(2)                   <---------ANAC58       --------->CCA1(2) ----->ANAC58          --------->ANAC58                       <---------ANAC46      --------->ARR14(2) ------ANAC55(2)       --------->ANAC46                       <---------ANAC58      --------->ARR11(1) -----LBD16            --------->ANAC58  <---------ATHB12    <-------TEIL           <---------ARR14(2)   cggatccaaacacgagagacatcccaaggaatctgattctccaatgtttgtctagacataagatgcgttgatggtaaagaagaaacgatacgcacatcag  30275600                                                                                      <---------ARR14(2)                                                                                      --------->ARR14(2)                                                                                      ------->TEIL                                                                                  <---------WOX13(1)                            --------->ATHB12                                    --------->MYB52(2)                <---------------AGL15                                         <---------MYB52(1)                <----------DOF2                                               --------->DOF5.7(2)                --------------->AGL15                                        --------->TOE2(3)          <-----------GT1  <---------YAB1                                    <-------GAMYB ------TEIL    <-----------------AG                     <---------YAB1      ------>ZmHOX2a(2) ----->ARR14(2)<-----------------AGL2               <---------CCA1(2)       ----------->GT1      ---- ------ARR14(2)<-----------------AGL3             <---------ALFIN1        --------->ARR11(3)    ----- ------GLK1(2) <-----------------AGL1       <---------ALFIN1              <---------ARR11(3)   <-----   attcacagggttttacttctttttttggtaagattggatttttctctcacccccatttcttattccatgcttcttagatcgttaattgaatctgcatccc  30275700      --------->KAN4(2)     <---------ICU4                                                      <-----------GT1    --------->ICU4                                                ----------->GT1    <---------YAB1    ------->TEIL                          <---------YAB1                  <--------  --------->YAB1 <-----------GT1     <---------ANAC58       --------->AHL20(1)            --------->ATHB12 ----->LBD16<---------AHL20(2)       <---------ANAC58       --------->AHL20(2)           <---------YAB1 ---->ANAC46--------->AHL20(2)   ---------->ID1             <---------AHL20(2)  ----------->GT1 ----LBD16<----------DOF2      <-----------RAV1(1)         --------->AHL20(2)   <---------ZAT6     --   gcagtgatcattctttaatttacgaatttgtttttgttgtcttgttgtcgatttttgtcaattttattgtgtaatttaccaagtgtaaattgtgattgaa  30275800                      --------->GLK1(1)                                  --------->LBD16                     >>>>>>>>>GT-1                                     <---------LBD16                   --------->At5g28300                              --------->SPL7        <---------AHL20(2)                  ----------->GT1                                 <---------SPL7        <---------RVE1(1)               <---------ANAC58                                  <---------ANAC58      <---------ARR11(3)         --------->ZAT18                                         <---------ANAC58   <---------TOE2(2) -WOX13(1)     <---------ANAC46  <---------YAB1                 --------------->AtSPL3<------ZmHOX2a(1) ------->ATHB12<---------ANAC58----------->GT1            --------->At4g35610       <---------TOE1(2)   tcgattgggagggcattgcgaggtaaatccatattgtgattttttgtttagtgtctaactagctgtatcgtactccgcataaatcacaggatttttttgg  30275900  Previous    Next  AGI:  At1g80500.1    Description:  intracellular transporter. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G20930.1); similar to putative TRAPP subunit [Brassica rapa] (GB:ABL97982.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Sedlin; (InterPro:IPR006722) Range:  from: 30275421    to: 30277560    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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