Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                  <--                                                                                                 ----                                                                                             --------                                                                                             <-------                                                                                            <--------                                                                                --------->YAB1 <-----                                   <---------YAB1                              <---------YAB1--------                                 --------->YAB1                              --------->YAB1<------NtERF2                         --------->CCA1(2)                                ----------->GT1 --------->LBD16                        --------->ARR11(1)                             --------->MYB52(1)--------->ANAC46 ---->ZAT2            ----------->ARR10          ----------->HVH21   ---------->DOF2     --------->RAP2.6(2) -----ZAT2 <-----------GT1      --------->ICU4  <---------WOX13(1)  ---------->DOF2     <---------LBD16   cagggctaattttaaaccctagaatagatatgaaatgatgagaaacactgactgaccttgccagagcccaaaaaaccggtgataatagtagccggaatcc  30265200                                                                                          --------->LBD16                                                                                     <---------ALFIN1                                                                                    --------->MYB46(3)                                                                                   --------->SPL7                                                                                  <------NtERF2                                                                                  <---------PCF5                                                                                  ------>NtERF2                                                                               --------->ATERF1(1)                                                                               <---------At4g35610                                                                               --------->At4g35610                                                                              <---------RAP2.3(1)                                                                              <---------RRTF1(1)                                                                              ------>NtERF2                                                                              <---------ERF1                                                                             <---------RAP2.3(3)                                                                             <---------DEAR3(1)                                                                             <---------RAP2.6(2)                                                                             <---------RAP2.3(2)                                                                             <---------RRTF1(3)                                                                             --------->ATERF1(2)                                                                             <---------ATERF1(2)                                                                     <---------ARR11(3)  <---------LBD16                               <---------ARR11(3)        ----------->HVH21   <---------RRTF1(2)                               --------->ARR14(2)       <------NtERF2<---------ARR14(2)  --------->LBD16       <---------ANAC46 <---------bZIP60(1)            --------->LBD16    --------->WRKY12<----------      <---------LBD16   --------->TGA2(1)      <---------ZAT2        --------->ARR14(2) --------->DEAR3(1) --------MYB52(1)       <---------TGA2(1)      --------->At4g35610   --------->ARR11(3) <---------LBD16 -------MYB52(1)     ----------->HVH21         --------->ZAT2 <---------At4g35610<-----------TCP11(1) ----->LBD16      <---------ZAT6           <---------ANAC58   --------->At4g35610<---------SPL7 ->ARR14(2)  --------->TOE2(3) <-----------ARR10      <---------DEAR3(1)  ----------->HVH21 --ARR14(2)--------->GLK1(2)   --------->GLK1(2)      <---------ANAC46  <----------DOF2<---------LBD16 -GLK1(2)<------NtERF2  --------->bZIP60(1)<---------ANAC58 <-----------RAV1(2)<------NtERF2 ----LBD16<---------GLK1(2)    <---------ARR14(2)    <---------LBD16 --------->GLK1(2)--------->MYB52(1) ->GLK1(2)<---------ARR14(2)  <---------GLK1(2)<---------At4g35610  <---------GLK1(2)--------->AtMYB61   ggttatctggcggaatcttagtggtgacatcagaatcttcagtctgcgtagctgaggcggagacagatgagaatctttgacggcggaccaccggggaata  30265300                                                                         --------->DAG2                                                                        ---------->DOF2                                                                   <---------At4g35610                                                                 <-----------RAV1(2)                                                                <---------At4g35610                                                                --------->At4g35610              <---                                                                <------NtERF2                 <------NtERF2                                                               ----------->RAV1(1)            -------                                                               <---------ATERF1(1)            <------                                                               ------>NtERF2                <--------                                                               <---------RAP2.3(1)         <------NtERF2                                                              --------->ATERF1(2)          --------->ATERF1(1)                                                              <---------DEAR3(1)           --------->At4g35610                    <---------ANAC46                          <---------RAP2.3(2)          <---------At4g35610           <------NtERF2                                      <---------RAP2.6(2)         ------>NtERF2          ------>NtERF2<---------ARR14(2)                     <---------ATERF1(2)         -----------         <---------DEAR3(1)        <---------AGP1            --------->ATERF1(1)          <---------RAP2.3(1)         <---------ANAC46       <--------P                   <------NtERF2               <---------DEAR3(1)         --------->DEAR3(1)   <---------MYB46(3)            <---------RAP2.3(1)          <---------RAP2.6(2)        --------->ATERF1(1)   --------->MYB55(2)            <---------DEAR4(2)           --------->ATERF1(2)        <------NtERF2  --------->ARR14(2)                   <---------ATERF1(1)          <---------ATERF1(2)       <---------ATERF1(1)   <---------AtMYB61              <---------ORA47(2)           <---------RAP2.3(3)       <---------RAP2.3(1)   --------->ALFIN1              <---------RAP2.3(3)           <---------RAP2.3(2)      <---------DEAR3(1)--------->MYB52(1)          <---------ZAT14--------->At4g35610  --------->RAP2.6(3) ---------->DOF2 ----------->TGA1 --------->At4g35610      <---------RAP2.3(2)  --------->MYB52(2) -----------WRI1 ----------->HVH21<---------At4g35610      <---------DEAR3(1)   <---------MYB46(3)  <   gaagaaagacggcgtcgttctgacggaaacggtggtagctctgggcctggagagaacagagacggcggcagaagaaaagcgatagttgaaggcggcagag  30265400          ----------->HVH21        ----------->GT1                                                                            <-       <---------DEAR3(1)                             ------>NtERF2                   <---------WRKY38(1)    <------ZmHOX2a(1)                                --------->RAP2.3(2)              <---------WRKY12 ---ZmHOX2a(1)                                       --------->DEAR3(1)     --------->ANAC58       <- -->At4g35610          <------MYB83                  --------->RAP2.3(3)    --------->ANAC58       <- ---At4g35610          <------MYB46(1)            <---------ANAC58      --------->ANAC58      <------ ---RAV1(2) ---------->DOF2                 <---------YAB1              --------->ANAC58     <------- >RAV1(1)--------->At5g28300    --------->WOX13(1)<---------ANAC58---------->DOF2   <-----------HVH21 ---------TOE1(1)   <------ZmHOX2a(1)    <---------ZAT6<------NtERF2  ---------->DOF2--------->WRKY18(1)   gaacgaggagcggtgaaagagaggaaggtcgtagcaatctctagtgttgatagcgtcgccattttagttaaagaaagcaagcgagaggtcaatggcgatt  30265500                                            --------->ANAC58                                            --------->ANAC58                                            --------->ANAC46                                          --------->ANAC46                                          <---------ALFIN1                                       <-------TEIL            --------->TOE2(1)         --------->CCA1(2) ----------->GT1                     --------->ARR14(2) --------ANAC46                      <---------ARR14(2)                                             < --------ANAC58                   --------->HSFC1(1)                   *TSS               <---------AHL20(1) --------ANAC58  <---------ALFIN1 <---------HSFB2a(2)              <---------AHL20(2)------------>CBF -GAMYB<-----------GT1    <---------At4g35610             <-----------GT1<-----------GT1  --------->AHL20(1) --MYB46(3) --------->TOE1(1)     --------->HSFB2a(2)  <---------ICU4  <-----------GT1    <---------ARR11(3)   ggcgagtttaaacctcgtcccactctgtagcttcttctagatacacacaccagataattttcactcgattttttttctctgtctcttctcaatattttct  30265600                                                           <------NtERF2                                                          ----------->RAV1(1)                                  --------->CCA1(2)       --------->RAP2.6(2)                                 --------->ARR11(3)       --------->RAP2.3(2)                                 <---------ARR11(3)     <---------PCF2                           <---------YAB1              <---------PCF5                          <------------CBF           --------->ATERF1(1)                         <---------ICU4              --------->ALFIN1                         --------->YAB1            <---------ANAC58                         --------->ATHB12          <---------ANAC58                                 -                  <---------CCA1(1)                <---------MYB46(3)                  ------->TEIL<-                 --------->ARR11(3)                <---------ANAC46                    <---------ARR11(1)                 <---------ARR14(2)               <---------DEAR3(1)                   --------->ARR14(2)        <---------YAB1  <---------YAB1           <---------PCF2                        <---------ARR14(2)     <---------YAB1   --------->YAB1            ----------->TCP11(1)                  <---------CCA1(2)   <-----------GT1<---------RVE1(1)           --------->ALFIN1                        <---------ARR14(1) ---------ICU4   <---------ARR11(3)         <-----------RAV1(1)            --------->ICU4          --   caaaattactatttttgaagatatttatcattgtagatatataagtctgtgggccgtgggccgcataggccttagtaattcttccttcgtatctcaaaac  30265700                          <-------MYC3                          ------->PIF4                          <-------PIF4                          ------->MYC2                          ------->PIF5                          <-------MYC4                          <-------PIF5                          <-------MYC2                          ------->MYC3                         <---------TGA1a                         --------->TGA1a                         <---------O2                         --------->ANAC46              --------->ARR14(2)                         --------->O2                  <---------GLK1(2)              <---------HSFB2a(2)                      <---------ARR14(2)              --------->HSFB2a(2)                      --------->ARR11(1)           ------>MYB83 ------->TEIL                 ----------->ARR10           ------>MYB46(1)------->MYC4        <---------ANAC58                      <----------DOF2 --------->ARR14(2)    <---------ALFIN1       <---------ANAC58                      ------>ZmHOX2a(1) <---------ARR14(2)--------->ZAT2       ------>ZmHOX2a(1)       --------->ZAT18  ---------->ID1 -------->GLK1(1)  <---------ZAT2       <---------MYB52(1)     ----------->GT1<-------TEIL --------KAN4(2)   <---------At4g35610 --------->TOE2(3) <-------TEIL       --------->ARR14(2) -------->TaMYB80  --------->At4g35610 --------->TOE1(3)--------->ARR14(1)  <---------ARR14(2)   gaatatccaaacctatctcgaagctgcacgtggcattcaatccttagttcgtgcttagattcggagtgcaaaattgcaaattcgtccttttgcaaaactg  30265800                              ----------->RAV1(1)                     <---------AHL20(2)                           --------->ANAC58            --------->ARR11(3)     <-----------GT1                           --------->ANAC58            <---------ARR11(3)<---------AHL20(2)                           --------->ANAC46    <---------ATHB12      --------->AHL20(2)                     --------->At4g35610     --------->WOX13(1)--------->ANAC58               <------                --------->RVE1(1)        <-----------GT1       --------->ANAC58<---------At5g28300   atatttctcaagaccaaaatatcagaggcaagcaacatcgaattaaccaattaagaagaacttgtaagctattaattcatttaccttgttagaatgcttt  30265900                                       ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                           <------ZmHOX2a(2)       --------->ANAC46               --------->CCA1(2)                          <---------ARR14(2)       --------->ANAC58              --------->AGP1                              <---------ARR11(3)       --------->ANAC58              <---------ARR11(3)                          <-----------ARR10     ----------->RAV1(1)             --------->ARR11(3)                          --------->ARR14(2)     <---------ALFIN1            ---------->DOF2                   --------->ANAC58              <---    --------->ANAC46     <---------AHL20(2)      ----------->RAV1(1)             --------->ARR11(3)<-  --------->ANAC46    --------->YAB1--------->RVE1(1)              --------->ANAC58             <---- ----DOF2            <---------ATHB51<---------AGP1       --------->MYB52(1) <---------At4g35610<----   cttccccccacacaaacaaaacaataataaatcggaaaagatctaaaacccccacaaaaaaaacagagtaagaaactgaagcagatcatctctgaggctg  30266000                                ----------->HVH21                        --------->ANAC46                               <-----------HVH21                       <---------ALFIN1                        --------->ALFIN1                           <---------At4g35610                        <---------REM1(1)                      --------->ALFIN1                      <------MYB46(1)                         <-------GAMYB                  ------->GAMYB--------->LBD16                <------NtERF2       <---------At4g35610    <---------ANAC58                --------->ATERF1(1) --------->At4g35610  <------MYB83                           <---------MYB46(3) <---------At4g35610 <---------AtMYB61    ------>NtERF2      <---------ORA47(2) --------HVH21   --------->ANAC58    <---------ZAT14        <---------DREB2C(2) --------WRKY12  --------->ANAC58 ---------->DOF2           --------->ALFIN1 --MYB46(1)    --------->MYB52(1)<-----------HVH21          <---------DEAR3(1)       ----------->RAV1(2) --MYB83  --------->At4g35610 <---------ANAC58          <-----------RAV1(2)     <-----------GT1   gtcagaggcagaagctccaacggaaggtgtagccgtgacagcgctggctgagccattttcaggcggtggagctactccccatttaccttctgactcaagc  30266100  Previous    Next  AGI:  At1g80480.1    Description:  PTAC17 (PLASTID TRANSCRIPTIONALLY ACTIVE17). similar to PRLI-interacting factor L, putative [Arabidopsis thaliana] (TAIR:AT1G15730.1); similar to Os02g0800000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048412.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66764.1); contains InterPro domain Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal (InterPro:IPR011629); contains InterPro domain Cobalamin (vitamin B12) biosynthesis CobW-like (InterPro:IPR003495) Range:  from: 30262968    to: 30265571    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g80490.1    Description:  TPR1 (TOPLESS-RELATED 1). similar to TPL/WSIP1 (WUS-INTERACTING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G15750.3); similar to TPL/WSIP1 (WUS-INTERACTING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G15750.4); similar to TPL/WSIP1 (WUS-INTERACTING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G15750.2); similar to CTV.2 [Poncirus trifoliata] (GB:AAN62336.1); similar to hypothetical protein OsJ_008151 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24668.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66747.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:I Range:  from: 30265823    to: 30271930    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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