Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                              <------                                       <---------YAB1                                         -------                  <-----------GT1    <-----------GT1                                         <-------            --------->TOE2(3)       <---------AHL20(2)                                       --------       <---------MYB52(2)          --------->AHL20(2)    --------->TOE2(3)             <---------AHL20(2)      --------->ANAC58       --------->TOE2(3)           --------->YAB1          <---------MYB52(1)      --------->ANAC58      <---------ZAT6              <---------YAB1    ---------->DOF2<---------YAB1 -YAB1--------->ANAC46      ----------->GT1     <----------DOF2        <---------YAB1 <---------AHL20(2)   gagttaccaagtaacattagtttccatctattgttaattttatcatttagctttgtttacgataattttgtttatgaaaagtcgtttttttatttttaaa  30260600                                                                 <---------AHL20(1)                                                                 --------->ARR11(3)                                                                 <---------ARR11(3)                                                  --------->ANAC58                                                  --------->ANAC58        <---------AHL20(2)                        --------->ANAC46  <---------AHL20(2)       <---------YAB1                       <---------YAB1       --------->AHL20(1)      <---------AHL20(2)      --------->AHL20(2)                    <---------AHL20(2) <---------AHL20(2)       --------->AHL20(2) ---------GT1                 --------->CCA1(2)   --------->ANAC55(2)           <---------ARR11(3) ---AHL20(2)                 --------->ARR11(1)   <---------ANAC55(2)     --------->HSFB2a(2) -->AHL20(2)          <---------ANAC46      --------->AHL20(2) --------->AHL20(1)    --------->YAB1 --AHL20(2)        --------->YAB1          --------->TOE2(3)   <---------AHL20(1)   <-------TEIL ->AHL20(2)       <---------YAB1     ----------->GT1        --------->AHL20(2)  --------->ARR11(3)---   ttactcatttttatttttctattatcgtatagatatgaacagaaatattaatacgcattttttaaaatatttttttctagtatatattcataaaattgaa  30260700               <---------ICU4               -------->ATHB1                                     <---------ICU4               --------->ATHB51                                  --------->ICU4               <---------AHL20(2)                              <---------ICU4              <---------YAB1                                   <--------HAHB4              <---------ATHB51                                --------->ICU4                      <--              --------->ICU4                                  <---------ATHB12                   ----           ------------>ATHB5                                 <---------YAB1                     <---          <---------MYB52(1)                             --------->YAB1             <----------DOF2        ----------->GT1                                 --------->DAG2     <---------ANAC58      ----   <---------MYB52(1)                       ------------>AtMYB77 <---------YAB1<---------AtMYB61-----  <-----------HVH21                         ----------->RAV1(1)--------->YAB1--------->ALFIN1   <---- <---------YAB1--------->ATHB12<---------AHL20(2)      ---------->DOF2     <---------ANAC46    ------ ------>GLK1(2)-------->HAHB4 --------->AHL20(2) <---------MYB52(1)        <---------ANAC58 <--------   attctgttaggcgttaattattgaatgagaaatttaaaatgaagaacaacagttagcaaaagtaatcattattttctacgtgtggtcttttcagattgcc  30260800                           --------->YAB1                           <---------ICU4                          --------->ICU4                       <---------YAB1                     --------->YAB1        <---------ICU4                     ----------->GT1    --------->YAB1                  --------->ATHB12     <---------YAB1               <---------ICU4          <---------AHL20(2)               --------->YAB1         --------->AHL20(2)                                        <----    <-----------GT1 <---------YAB1    --------->AHL20(1)                                   <---------YAB1 -------MYB52(1)  <---------ICU4      <---------AHL20(1)            ----------->GT1      --------->YAB1 ----->LBD16   <--------HAHB4        --------->YAB1               --------->ANAC58      <---------YAB1 ------RAP2.6(3)  --------->ATHB51<---------AHL20(2)              --------->ANAC58   <---------MYB52(1) ----->At5g28300 <---------YAB1  --------->AHL20(2)       ---------->DOF2           <-------GAMYB ------>GT1   <---------YAB1  --------->YAB1              <---------ICU4           ----------->GT1  - -----ANAC46 <-----------GT1  <--------HAHB4           --------->YAB1           <-----------HVH21 --- --------->AtSPL3--------->ICU4--------->TOE2(3)      --------->AHL20(2)    --------->DAG2<---------AHL20(2) -WOX13(1) <---------AHL20(2)<---------YAB1<---------AHL20(2)<----------ID1---------->DOF2--------->AHL20(2)   gtaaattaaccattttatcattattgtaattatcattaaatataataaatccaccattaataaaggccaagcgaaaaaaaagggtcagttattaaaatta  30260900                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                -----                                          <------------CBF                                      -----                                       --------->AHL20(2)                                     -------                                   --------->TOE2(3)                                    <----------DOF2        ----------->HVH21   ----------->TBP                                         <---------ZAT18<-      <---------ANAC58      --------->AHL20(2)                                --------->TOE2(3) -----      <---------ANAC46     --------->ARR11(3)                                 --------->TOE1(2)<-----      <---------ANAC58     <---------AHL20(1)                                 --------->TOE2(2)<----- -------GT1   <----------DOF2   <-----------GT1                              <---------HSFB2a(1)----- -------->MYB52(1)         <---------ARR11(3)   ---------->DOF2  <---------ANAC58<---------ANAC58---- ------>MYB46(3)      <---------YAB1  --------->YAB1      *TSS   <---------ANAC58<---------ANAC58----   accaaggggcgtgactctttgattttgaatatatataccataaaaattgtcaaagagaagtcagatagcgagcgagaaaaccttcgtgctctttcttcgc  30261000                                                                                            ---------                                                                                         <<<<<<<<<<E2Fb                                                                                         <<<<<<<<<<E2Fa  ----------->GT1                                                                        <<<<<<<<<<E2Fe --->NtERF2                                                                              <<<<<<<<<<E2Fc ----->ANAC46                                                                            <<<<<<<<<<E2Ff ----->DREB2C(2)                                                                       <---------ANAC46 ------ATERF1(2)                                                                      <---------LBD16 ----->ATERF1(2)                                                                     <---------TGA1a ----->RAP2.3(2)                                                                     ================ ----->DEAR3(1)                                                     --------------------->WRI1 ----->RRTF1(3)                                                     ===========================bZIP_DOF ----->RRTF1(2)                                                     <----------DOF2 --------->SPL7 ---->RAP2.3(1)                                               <---------ALFIN1     --------->ATERF1(1) ---->ATERF1(1)                                           <------NtERF2            <------NtERF2 -->ANAC46                    --------->O2               <---------RAP2.6(3)       ------>NtERF2 -----NtERF2 <---------DEAR3(1)                          <-----------HVH21        <---------SPL7 ---->ORA47(2)                <---------O2               <-----------TGA1         ----------->HVH21 ----ATERF1(1)           <---------ARR14(2)             --------->RAP2.3(3)     <---------LBD16 ----RAP2.3(1)           --------->ARR14(2)             --------->ANAC46      <---------DEAR3(1)  <-- ---->ERF1--------->ETT(2)--------->DEAR3(2)            --------->DEAR3(1)   ------->TEIL<<<<<<<<<<E2Fd ----->RAP2.6(2)      <---------ANAC58                 --------->RAP2.3(1)  --------->MYB52(1)   ---- ----->RAP2.3(3)      <---------ANAC58  ------>ZmHOX2a(1)------>NtERF2  <---------AtLEC2--------->LBD16   cgccaagttatatcgacggtgttttcgtatcgacgtcttctcctctctctctctctcgccgtcatcacctctttgaatgaacggcggacgcgggaaaagg  30261100                                                                                 <---------ANAC58                                                                       <-----------RAV1(1)                                                      <---------HSFB2a(2)        <---------ANAC46                                      --------->ARR11(3)        <---------HSFB2a(2)              <---                 --------------->AtSPL8               --------->HSFC1(1)         <---------ANAC58<--- ->DOF2  ----------->GT1          --------->YAB1--------->MYB52(2) <---------GLK1(2)             <--- ==bZIP_DOF      --------------->AtSPL3<---------YAB1 --------->HSFB2a(2)    <---------ANAC58    <--- -------MYB59  <-----------GT1   --------->AHL20(2)   <---------HSFC1(1)     <---------ANAC58    <--- ------------->AGL1  <---------ZAT18  <---------ARR11(3)        --------->HSFB2a(2)     ----------->HVH21   cctaactcagtaagttatttcagtacccttatacaataaatatcatttgtttgtttctagacacctctagaatttgttggcttacttgtggtgacagagt  30261200      --------->ZAT18      --------->ZAT14      <---------ZAT18                                                                 --------->ARR14(2)      <---------ARR14(2)                                                              --------->GLK1(2)      <---------ZAT14                                                                 <---------ARR14(2)      --------->ARR14(2)                                                          --------->ANAC46 ------ANAC58                          <------ZmHOX2a(1)                          --------->ANAC55(2) ------O2                           <------ZmHOX2a(1)                            <---------LBD16 ------ANAC46                    <---------At4g35610                           ----------->HVH21 ------ANAC58                    --------->At4g35610             ---------->DOF2--------->MYB52(1) ------TGA1a<---------YAB1       <------NtERF2          ------->TEIL           --------->WRKY12   cgtgagagtatactctgatttttgatggtttaggcagaggaggaaggaaccatggctgaaccctctgtaaagaagagcaagttgacggaatccgattgga  30261300                                        --------->HSFB2a(1)                                        <---------HSFB2a(1)                                      ---------->DOF2                                   --------->HSFB2a(2)                                   <---------HSFB2a(2)                             <---------ARR14(2)                             --------->ARR14(2)                     --------->ANAC46                             <---------ARR11(3)                     --------->ANAC58                             <---------GLK1(2)                      --------->ANAC58                             --------->AGP1                 <---------MYB52(1)                             --------->ARR11(3)        <---------ARR14(2)                            <---------At4g35610        --------->GLK1(2)              --------->ATHB12   ------>ZmHOX2a(1)     --------->ARR14(2)                   ---------           <---------At4g35610 ------>ZmHOX2a(2)      --------->GLK1(1)     <-----------HVH21           --------->At4g35610<------ZmHOX2a(2)       <---------GLK1(1)   --------->SPL7    <--------        <---------At4g35610----------->ARR10 --------->TOE1(2)  <-----------GT1---------->DOF2   <---   taagtggtttagcagatgatttgctacttcagatcctctcgaaagtccctacgagggaatccgttttcacaagccgtatgtcaaagcgatggagaaatct  30261400               <---------ANAC46       <-------MYC2       <-------MYC3                                                         <----------DOF2       ------->MYC3                                                <----------DOF2       ------->MYC2                                            <---------GLK1(1)      --------->ANAC58                                         --------->GLK1(1)      --------->ANAC58                                        --------->ARR11(3)                 ---- >GLK1(1)      <---------ANAC58                               <---------ARR11(3) <---------ZAT14 ---- -GLK1(1)      <---------ANAC58----------->GT1               <---------HSFB2a(1) --------->ZAT14 ---- ------LBD16------>ZmHOX2a(1)<---------ZAT14                 --------->HSFB2a(1) <---------At4g35610   ctggagacacgttcctgccttggacttggactccagtaaattccctcatgagtcggacttggaagatttctttgatagctttctgcagtttgatggtaat  30261500  Previous    Next  AGI:  At1g80470.1    Description:  Identical to Putative F-box/FBD/LRR-repeat protein At1g80470 [Arabidopsis Thaliana] (GB:Q9M8L5); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G16930.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 30260958    to: 30262808    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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