Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       --------->TOE2(3)     --------->YAB1 ---------YAB1 ----->ATHB1 -------ICU4                                                                                        < ------YAB1                                                                                        -- ----->AHL20(1)                                                                                   <-- ----->ICU4  <------MYB83                                                                         <-- ----->AHL20(2)    --------->TOE2(3)                                                           ------ ------AHL20(2)<<<<<<<<<MYB2         --------->GLK1(2)                                         <----- -->AHL20(2) <------MYB46(1)        <---------GLK1(1)                                 <---------At5g28300 ---AHL20(2)--------->MYB59         --------->GLK1(1)   <-----------GT1              <-----------GT1-   ttattaatcttagtttggttttcttaaaccgaatgaagaaatctggtctgtttcggtttaacagtttttttttttttttttggcaatttacagttcaaat  30221700                                                                  --------->GLK1(2)     <------NtERF2          --------->LBD16                       --------->ARR14(2)   <---------ANAC46      -------->P                            --------->ANAC58  <------NtERF2          --------->MYB52(1)                    --------->ANAC46 ---------DEAR3(1)    --------->At4g35610               ----------->HVH21 ------->LBD16        <---------At4g35610       --------->MYB52(1)------->TEIL -------ANAC58  <---------HSFB2a(2)            ------>ZmHOX2a(1)  <---------ARR14(2) -------ANAC58 <---------LBD16--------->WRKY18(1)    --------->ARR14(2)                           <-- --->ARR14(2)<---------ARR14(2)  --------->ANAC58    <---------ARR14(2)    <-----------GT1   <------- ----ARR14(2)--------->ARR14(2)  --------->ANAC58 --------->MYB46(3)    ----------->GT1     <-------- -------->ALFIN1--------->HSFB2a(2)       <---------At4g35610  --------->ANAC58      <---------YAB1   ccgtggcggtattcagttctggagagctaccggacaagctattcatctcctaaccgatatgacacacgaatctgtagtaacatttttctgatggtccaca  30221800                                                       --------->MYB52(1)                                                      --------->MYB52(1)                                                      <-----------GT1                                                    <---------MYB52(2)                                                   --------->ANAC58                                           --------->ATHB12                                           --------->YAB1       <---------ANAC46                                           <---------ICU4   <---------ARR14(2)                                           <--------HAHB4   --------->ARR14(2)        <---------ETT(2)                               <---------TOE1(2)   --------->ANAC58                   --------->ETT(2) --------->At4g35610          <---------ALFIN1     --------->ANAC46   --------->MYB52(2)        <---- <---------At4g35610     <---------ANAC58 <---------ATHB12  <---------GLK1(2)      <---------REM1(1) -----TEIL             <-----------ARR10  <---------YAB1  --------->LBD16  <------MYB83         <---- --ALFIN1      --------->AHL20(2)       --------->YAB1<---------ARR14(2)   <------MYB46(1)     <----- -ZAT18 <-----------HVH21<---------ANAC58 --------->ICU4<---------LBD16   --------->MYB59      ------   ttcatctgtctgtcaaataaaacagtgtcttcccacggtctctcatcattaccaagtaaccggattcggtgttagttcggtttagttgtagacaggtttg  30221900                                  ----------->GT1                <---------LBD16                              --------->ZAT6                     --------->LBD16                          --------->At5g28300                   <---------LBD16                        --------->ETT(1)              <-------TEIL                           -------- <----------DOF2       <<<<<<<<<<DREB2A               ------->TEIL--------->LBD16            <------- --MYB46(1)            <<<<<<<<<<DREB1A           <---------------AtSPL8            <---------ARR14(2) --MYB83           <---------ANAC58               --------------->AtSPL8            <---------ARR11(3) ----AtMYB61       <---------ANAC58  <---------AHL20(2)     <-----------GT1         --------->ARR11(3) --->MYB59--------->LBD16<---------DEAR3(2)       <---------KAN4(2)--------->LBD16  --------->ARR14(2)   gttctttcaaaccggacttgttcttgtcggtaacacgagttaattgtagtggaatgtacatttttcccccggtttattcaaggcaatatctggtctgctt  30222000                 <-----------GT1                <---------YAB1             <---------YAB1          <----------DOF2                                                                           <       <-----------GT1                                                                              <      <-----------GT1                                                                              <-     <---------AHL20(2)                    --------->YAB1                                          <-  <---------ARR11(3)   ----------->HVH21   <---------ICU4                                      <-----  --------->ARR11(3)   --------->WRKY12   --------->AHL20(2)                                  <------  --------->AHL20(1) <---------At4g35610  --------->ICU4           <------------CBF          --------  <---------AHL20(1) --------->At4g35610--------->TOE2(3) --------->MYB52(1)                --------- ->At4g35610 --------->AHL20(2)    ---------->DOF2      --------->MYB46(3)                  --------- --At4g35610 <---------AHL20(2)<----------ID1 <-----------GT1------->GAMYB           <-----------RAV1(1)   cgaatattttatctttttattacagttgacagagagacaaagcattaattacacattatccaacggagaaattgtgactcacatagtatgtggcaagaat  30222100    ---------->ID1 ---------DAG2 ----------DOF2 --------ANAC58               --------->AHL20(2) --------ANAC58            --------->AHL20(2)                        --------->ALFIN1 -------CBF                --------->YAB1                            <-----------RAV1(1) ---ICU4                --------->YAB1     <------MYB46(1)     <---------ANAC46<---------ANAC58 ->ICU4                <---------ATHB12    <------MYB83       <---------At4g35610 >ANAC58    --------->ANAC46  <---------AHL20(2)         ------>ZmHOX2a(1)     <---------ANAC58 >ANAC58   *TSS        <---------ATHB51  <--------P<<<<<<<<<TBF1   <---------bZIP60(2)  <-----------HVH21   tgctttttcgttttacgaaaaaccaataataaaaaattatcaagttggtcttcttcttcctcgttgctgatgtgtcgctctgcttgagagagtcagagag  30222200                                  <---------ARR14(2)                                  <---------ARR11(3)                                  --------->ARR11(3)                                  --------->ARR14(2)                                xxxxxxxxxxxxxxxxx>smallRNA(le3)                            --------->RAP2.6(2)                            --------->ANAC58                                 <---------ICU4                            --------->ANAC58                                 -------->HAHB4                          <-------GAMYB                                      --------->YAB1                         <---------MYB46(3)                                 --------->ICU4                         <---------SPL7                                     <---------YAB1                         <---------DEAR3(2)                               --------->YAB1 --------->ARR14(2)                        <---------ANAC58                                 <---------YAB1  <---------ARR14(2)                <---------HSFB2a(2)  <---------HSFB2a(2)                <---------AHL20(2)                --------->HSFB2a(2) <---------LBD16                     --------->AHL20(1)      <----         --------->DAG2 <---------ANAC58                                --------->AHL20(2)   --------        --------->DAG2  <---------RAP2.6(2)                            --------->YAB1   <---------CCA1(2)       ---------->DOF2  <---------DREB2C(2)                           <---------YAB1  --------->AHL20(2)   tcaagagagaaaaggggtcgagaatggcggtcgcaatatctgggagtagtttgatatcgtcgactcttcagcattataataatcggatttatatccgaga  30222300           <-----------HVH21         --------->LBD16        <---------ANAC55(2)        <---------ANAC46        <---------ANAC55(1)                                --------->MYB52(2)        <---------ANAC58                                   <---------MYB46(3)        --------->ANAC55(2)                               <-------TEIL                            ---     --------->ARR14(2)                                  <---------MYB52(1)                       <--     --------->GLK1(2)                            ---------->DOF2                       ------->GAMYB     <---------ARR14(2)                   <---------AHL20(2)                         <-----------GT1< -----GLK1(2)<-----------GT1              --------->AHL20(2)         ------>ZmHOX2a(1) --------->MYB46(3) ->LBD16<---------ANAC58               <----------DOF2--------------->AtSPL3 --------->LBD16    <----   ttatccgattccgtgtcactcttctaatccaatttgcaattcttttaatttcaaaagacgttcgttctctccttcttcccccaaatttaacgaccatgtc  30222400                                                                                 <---------AHL20(2)                                                                                --------->AHL20(2)                                                                                --------->AHL20(1)                                                                     --------->ANAC58                                                                     --------->ANAC46                                                                     --------->ANAC58                                                                   <---------DOF5.7(2)                                                                  <---------WRKY12         ------>ZmHOX2a(1)                                        <---------WRKY38(1) ------>DOF5.7(2)                                             <---------TOE1(2) <---------AHL20(1) -------MYB52(1)               <----------DOF2          <----------DOF2        --------->YAB1      -- ---------DOF5.7(2)     ------>ZmHOX2a(1)               ----------------------->TaNAC69(2)   <------- -----ANAC46       <-----------GT1                    ------>ZmHOX2a(1)  ------>NtERF2  <----------DOF2   gttaacccttcctcttcttatttatcctccaagctttctccaattcgaacccattcctctttcgctggtaaacgcctccaaatataatctcttttctttt  30222500                                                            <---------ANAC58                                <----------DOF2             <---------ANAC55(2)                              <------------------------ANAC81                           <---------DAG2       --------->ATHB12    <---------AHL20(2)                           <----------DOF2    <---------WOX13(1)   --------->AHL20(2)         ------>ZmHOX2a(1)                          <---------ANAC58  --------->ATHB12----------->GT1       <----------DOF2                          <---------ANAC58 <---------YAB1   <---------ANAC58     <---------ANAC58 ---->ZmHOX2a(1)   <---------TOE2(3)       --------->ICU4   <---------ANAC46     <---------ANAC58 ---DOF2           <---------TOE1(3) <----------DOF2   <----------DOF2 --------->AtLEC2<---------GLK1(2)   cctcgcttccttctaatttttgaggtttgcttttcttttcttttgatgattgtttggctatttcgtaaattttatgcaaaattgctttagaatttcctca  30222600  Previous    Next  AGI:  At1g80370.1    Description:  CYCA2;4 (CYCLIN A2;4); cyclin-dependent protein kinase regulator. Identical to Cyclin-A2-4 (CYCA2-4) [Arabidopsis Thaliana] (GB:Q9C968); similar to CYCA2,3 (CYCLIN A2,3), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT1G15570.1); similar to cyclin (GB:AAA51659.1); contains InterPro domain G2/mitotic-specific cyclin A (InterPro:IPR015453); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, A/B/D/E (InterPro:IPR014400); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like Range:  from: 30218597    to: 30221753    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g80380.1    Description:  phosphoribulokinase/uridine kinase-related. similar to hypothetical protein [Vitis vinifera] (GB:CAN70526.1); similar to Os01g0682500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043886.1); contains domain SSF52540 (SSF52540); contains domain G3DSA:3.40.50.300 (G3DSA:3.40.50.300) Range:  from: 30222111    to: 30224896    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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