Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                -----                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                             --------       ------>ZmHOX2a(1)                                                                    --------- ----ANAC55(2)                            --------->AHL20(2)                                <--------HAHB4 --->ANAC46                             ----------->GT1                             <---------ARR11(3) --->ANAC55(2)                         --------->DAG2                               --------->ARR11(3) --->ANAC58                      <---------------AGL15                              --------->GLK1(2) --->ANAC58                 --------->TOE2(3)                                       <---------ARR14(2) --->ANAC55(1)        <----------DOF2 ---------->DOF2                    ----------->GT1    <-------- ----->GT1------>ZmHOX2a(1) <----------DOF2               --------->TOE1(2)         --------->ARR14(2)   taactattcctcctctctatcgttcttttactttaatacaaaaagtaaatataaaaaaaacattcgaacagagagaagaaaaacaaaatctgcatcatta  30218200                                                                             --------->MYB52(2)                                                                         --------->ATHB12                                                                         -------->HAHB4 ------->AHL20(2)                                                        <---------ICU4 ---->YAB1                                             ----------->GT1  <---------ATHB12 -----ICU4                                      --------->ANAC58  ----------->GT1                  <- --->AHL20(2)                            <---------------AGL15   <---------TOE2(3)                 -- ----AHL20(2)                            --------------->AGL15   --------->MYB59           ---------- ->TOE2(3)                              ----------------->AGL2   --------->DAG2        --------->GLK1(2) >ATHB12                           --------->ANAC46   <---------MYB46(3)--------->ICU4 <---------ARR11(3) -ICU4    ----------->GT1     ----------->HVH21 --------->ANAC58 <---------TOE1(3) <---------MYB59 --   attacatacaacaggttaatggagaaatggaaatgacacagaacccaaactagcaatgggtgaaaataaggtaaatgattagttaccaaaatctaaagaa  30218300                     ------>MYB46(1)              --------->ANAC46              --------->ANAC58              --------->ANAC58                <---------ANAC58              --------->ANAC55(2)             --------->ANAC55(2)              <---------ANAC55(2)             <---------ANAC58             --------------->AtSPL3           <---------ANAC55(2)             --------------->AtSPL8         <-----------GT1                   <---------ZAT14           <---------ATHB12          ------->GAMYB --------->YAB1        <---------ZAT14 --------ARR11(3)    ------>MYB83    --------->TOE2(3)           --------->ANAC58          <--------- ------->GLK1(2)   <---------MYB59  --------->MYB46(3)  --------->AHL20(2)    --------->ZAT14  <----- >DOF2   --------->WOX13(1)       <-----------GT1 <---------YAB1 --------->ANAC46      <---------At4g35610 ------->ARR11(3)------->TEIL--------->ICU4 --------->AHL20(2)   --------->ANAC58 <---------ZAT6   aaatctatgttcaatcacgtaccaaattgaaaagattaaccacaaattacttatcaaaaaaaatcccaagcaaactaaactgtagtgttagctctttctt  30218400                                  <---------ANAC58                                  --------->ANAC55(2)                                  <---------ANAC46                                  <---------ANAC58                           <---------ATHB12                               --------->YAB1                         --------->WOX13(1)                             --------->AHL20(2)                        <---------WRKY38(1)                            --------->YAB1      --------->AHL20(2)                        <---------WRKY12                            --------->YAB1       <---------AHL20(2) -DOF2  <----------DOF2--------->WRKY18(1)                   <----------DOF2 ---------->DOF2 -----DOF2     --------->WRKY18(1)----------->GT1      <---------ALFIN1--------->AHL20(2)--------->AHL20(2)   tatccccttgttttatggtcaaacagtcaatgagttgcgttataagcacataaacaaacacttctttctctaataaaaataaagtttctatttttatata  30218500                               <-----------GT1                           --------->TOE2(3)                           <----------DOF2                        --------->ARR11(3)     <---------At4g35610           ---------->DOF2      ---------->DOF2   <---------ARR11(3)     --------->At4g35610       <---------AtLEC2        *TSS ---------->DOF2       <---------CCA1(2) <---------CCA1(2)           <----------DOF2<------------CBF   cagaaaagaaaagaatataaaacttatatctttaaaccattctatatcccgctcactctcagagacagtccctttgcataaaagcgaattgactataacc  30218600                     <---------ZAT2                     --------->ZAT2                                ----------->GT1                  -                    --------->ANAC58                         --------->AHL20(2)                     <             ------>ZmHOX2a(2)                               <---------AHL20(2)                <<<<<<           <---------ARR14(2)                               --------->AHL20(2)          <-----------GT1           --------->ARR14(2) <----------DOF2          --------->LBD16       ---------->DOF2<<<<<<<<<TBF1 <-----------GT1    --------->ANAC58         <---------At4g35610 ---------->DOF2   <----------DOF2<<<   catttactctctcgatctgcccaagctcccatcttttctgttcgtagagctcatttccccaaattaataaagaaaaaaaaaaagactttttttcttcttc  30218700                   <---------ANAC46                <---------HSFB2a(2)                --------->HSFB2a(2)                                                                <-               <---------LBD16                                                                   <---           <---------HSFC1(2)                                                                   <----           <---------HSFB2a(1)                                                                  <----   <---------HSFB2a(2)                                                                        <------   --------->HSFB2a(2)                                                     <---------ANAC46   <------ -------------->AGL15 --------->ZAT18                                      <---------ANAC58<---------ARR11(3) ---------------AGL15 <---------ZAT14--------->YAB1                        <---------ANAC58--------->ARR11(3) <<<TBF1   --------->HSFC1(2)        --------->TOE2(3)                   <---------YAB1   --------->YAB1 <<<<<<TBF1--------->HSFB2a(1)    <---------CCA1(2)                <---------AHL20(2)    <---------YAB1   ttcttcttgaagaaatttctggagcgtagtaagtttctatcttagtctctctatctccatcttctctgttttattttgcttgtgaaatgtgatgatatta  30218800                                             ----------->GT1                                        --------->HSFB2a(2)        --------->ARR14(2)              ------>ZmHOX2a(1)       <---------RAP2.6(3)              <---------HSFB2a(2)       ------>NtERF2                   <---------LBD16      --------->DEAR3(1)              <---------LBD16      <---------ETT(1)                ----------->RAV1(2) --------AHL20(2)                 --------->ARR14(2) ------YAB1                      <-------GAMYB            <---------DAG2 -----AHL20(1)                  <---------MYB46(3)<---------ANAC46 -----AHL20(2)                  <---------DEAR3(2)<---------ANAC58                               <--- ---AHL20(2)       <----------DOF2<---------ARR14(2)      <----------DOF2             <-------TEIL ---YAB1<---------ARR14(2)     <---------DEAR3(1) <---------ANAC58           <----------DOF2<--------   tttttatgccgaccctctgttcttttttttgaggcggttctcctggagggtttcttgaaactttatcttggttttgaagcttttttggttcatgggtcac  30218900                                                                                               ------                                                                                        <----------DOF2                                                                                      --------->At4g35610                                                                                      <---------At4g35610                                                           ------>ZmHOX2a(2)    ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)   <---------ARR11(3)                                                         <---------ARR14(2)   --------->ARR11(3)       <---------ANAC58                            ------->GAMYB<------MYB46(1)<------ZmHOX2a(2)       <---------ANAC58                            <---------SPL7             <---------ARR14(3)       <---------ANAC46                           <---------MYB52(2)          <---------ARR14(2) --------->ARR14(2)                               --------->MYB46(3)          --------->ARR14(3) <---------GLK1(2)                    <---------DAG2--------->MYB52(1)        --------->AGP1   <----- <---------ARR14(2)          <----------DOF2     <---------TOE2(3)            --------->ARR14(2) ------LBD16    <---------TOE2(3)     <----------DOF2    --------->ARR14(2)  --------->GLK1(1) ------ ---HVH21      ---------->DOF2 <---------YAB1   <-----------GT1 <------MYB83 <---------GLK1(1)<------   tcggatttttcttggattaaagaaaatgtgactttgattacttttttttttaacgaacggatcgataggtttttttgggagatcttgcagctttaaatca  30219000                                              <---------ANAC58                <-----------RAV1(2)           <---------ANAC58      ---------->ID1           ------>ZmHOX2a(2)   <----------DOF2--------->At4g35610     <----------DOF2 --->YAB1      ------>ZmHOX2a(1)    <---------MYB46(3) ----ICU4<---------MYB52(1)  --------->ARR11(3)       ------>ZmHOX2a(1)          <---------AHL20(2) --->ATHB12    =======================HOX2a_HOX2a ---------->ID1             --------->AHL20(2) ---ATHB12    --------->TOE2(3)==============================HOX2a_HOX2a   --------->AHL20(2)--------   tgggtcttttcgttatcctcagaagaaatttgatctagtcgttccttttcttgttcctatttcttatggataaacatttttatataaaaacccatgaaag  30219100  Previous    Next  AGI:  At1g80370.1    Description:  CYCA2;4 (CYCLIN A2;4); cyclin-dependent protein kinase regulator. Identical to Cyclin-A2-4 (CYCA2-4) [Arabidopsis Thaliana] (GB:Q9C968); similar to CYCA2,3 (CYCLIN A2,3), cyclin-dependent protein kinase regulator [Arabidopsis thaliana] (TAIR:AT1G15570.1); similar to cyclin (GB:AAA51659.1); contains InterPro domain G2/mitotic-specific cyclin A (InterPro:IPR015453); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin, A/B/D/E (InterPro:IPR014400); contains InterPro domain Cyclin, N-terminal (InterPro:IPR006671); contains InterPro domain Cyclin-like Range:  from: 30218597    to: 30221753    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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