Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->ANAC55(2)               <---------ANAC55(2) ---------ANAC58 ---------ANAC58 ---------ANAC46 -----NtERF2   --------->ANAC46                    <---------HSFB2a(1)                            --- ------>MYB55(2)   --------->GLK1(1)               --------->HSFB2a(1)    ---------->DOF2        ---- -------MYB46(3)   <---------GLK1(1)         --------->At5g28300     <---------------AGL15       ---- ------RAP2.6(2)--------->LBD16           <---------At5g28300        --------------->AGL15   -------- ----MYB46(3) <---------LBD16            --------->MYB52(1)          <---------YAB1--------->ANAC58 -->ALFIN1   --------->MYB52(1)         <---------ATHB12       <---------ARR11(3)  --------->ANAC58 - ---DEAR3(1)<---------ZAT14<---------ANAC46 ----------->GT1 <---------ALFIN1  --------->MYB52(1) ---- ---AtMYB61 <---------ARR14(2)         <---------MYB52(2) --------->SPL7<---------YAB1      ---------   tggctgggccagagtttacggaaatcgtggaggggagagccaataacggtgaaaccttcggaccacatcttcttattaaagaacgaagcaatacgagcta  30206700            --------->ANAC58            --------->ANAC46     <------NtERF2 <----------DOF2            --------->ANAC58    ------>NtERF2--------->LBD16          <---------ATERF1(1)   <---------RAP2.6(3)         --------->ARR14(2)    --------->RAP2.3(2)           <------NtERF2         <---------ARR14(2)    --------->RAP2.6(2)          --------->LBD16     <---------LBD16           --------->RAP2.3(3)  <---------HSFB2a(2)   <---------ARR14(2)          --------->DEAR3(1)   --------->HSFB2a(2)   --------->ARR14(2)         --------->RAP2.3(1) --------->SPL7  --------->ATERF1(1)         --------->ATERF1(1)<---------SPL1(1) <---------SPL7               --------->ERF1 <---------At4g35610 --->NtERF2--------->ATERF1(1)--------->DEAR4(2)<---------SPL7             --------->ALFIN1 ----->ANAC58                 --------->DEAR3(2)--------->ZAT14           <---------MYB52(1)  ------- ----->ANAC58                --------->ZAT2  --------->At4g35610       <---------LBD16        <------ ->ZAT2--------->LBD16       <---------ATERF1(1)<---------ZAT14---------->DOF2   --------->GLK1(1) -------->DEAR3(1)    ----------->HVH21--------->At4g35610 --------->RAP2.6(2) <------ZmHOX2a(1) ----->ANAC46------>NtERF2   <---------ZAT2  <------------------SPL14 --------->MYB52(1)    <------NtERF2 >ANAC46<------NtERF2 --------->WRKY12 <---------At4g35610<---------LBD16--------->LBD16  <---------ANAC46   cgccgtagccggagacgccattctctgaccgagccgccttgagcttccgctgtacgggaagccggaaaagacttccggtgaggaactcaatgtcgtcgag  30206800                     <------MYB46(1)                    <---------AtMYB61                    --------->MYB111(1)                    <---------DEAR3(1)                    --------->MYB111(2)    ------->MYC3                    <---------MYB46(3)     <-------MYC2                    --------->MYB46(2)     ------->MYC2                         --------->GLK1(1)                    --------->MYB55(2)     <-------MYC3                         <---------GLK1(1)                   =================================MYC_MYB                    --------->ARR14(2)                   <---------MYB55(1)      ------->MYC4                    <-------MYC3                  ==================================MYC_MYB                ------->MYC3                  <-------GAMYB            <-------PIF5                    ------->PIF5                 --------->MYB55(2)        ------->PIF5                    <-------MYC2                 <---------MYB46(3)       --------->PIF3(3)                ------->MYC4                --------->ALFIN1          --------->O2                     <-------MYC4               --------->LBD16            <---------PIF3(3)                ------->MYC2              <---------ANAC46            <---------TGA1a                  <-------PIF5            ------>NtERF2                 <---------O2                    <---------ANAC46           --------->ANAC58               --------->TGA1a                 --------->O2           <---------DEAR3(1)           <---------ALFIN1                  <---------O2           --------->ANAC58 <---------HSFB2a(2)                           --------->PIF3(3)          --------->SPL7   ------>ZmHOX2a(2)--------->ALFIN1              <<<<<<<<<<HY5 <---------AtMYB61          --------->ATERF1(1)    --------->ANAC58                         <---------TGA1a         <---------ATERF1(1)--------->HSFB2a(2)    --------->ANAC46       --------->TGA1a        ----------->HVH21--------->ARR11(3)<-------MYC4  --------->PCF2   <---------PIF3(3)     --------->ALFIN1<------MYB83<---------HSFB2a(1)    <-----------TCP11(1)   <---------ARR14(2)   <---------ANAC46<--------P    --------->ANAC58  --------->ANAC58      <<<<<<<<<<AtbZIP1 -->HSFB2a(2) --------->DEAR3(1) --------->HSFB2a(1) --------->YAB1    ---------------->PIF3(2) ---HSFB2a(2)<------NtERF2--------->At4g35610      --------->ANAC58   <-----------------PIF3(1)   ---   aagtcgcgaggggacgccgtggttggtgatctggaacgctccccacgtggtacaagcatggcccacaagagtggccacgtggatatcggagaggtcgatg  30206900                         <---------ANAC46                         <---------DEAR3(1)                        <------NtERF2                            --------->GLK1(2)                        --------->ATERF1(1)              <-------MYC4                        <-----------------------TaNAC69(2)       --------->ARR14(2)                       <---------ATERF1(1)               ------->PIF5                      <---------DEAR3(1)                 ------->MYC2                      --------->ALFIN1                   ------->MYC3                     --------->ATERF1(1)                 <-------MYC3                      <------MYB46(1)                    <---------ATERF1(1)                  ------->MYC4                    <--------P                   --------->ALFIN1                      <-------PIF5                    --------->ALFIN1                   <---------DEAR3(1)                    <-------MYC2                   <---------MYB52(1)                   <---------ANAC46                  --------->ZAT18                   --------->At4g35610                  <------NtERF2                  <------ZmHOX2a(1)                     <---------O2                <---------DEAR3(1)          <----------DOF2      <---------ARR14(2)    --------->TGA1a               --------->ATERF1(1)     <------ZmHOX2a(2)==========================================MYC_MYB             <---------DEAR3(1)        =================HOX2a_HOX2a<---------LBD16     <---------At4g35610           <-----------HVH21          --------->ARR11(3)<---------O2                   <---------TGA1a          <---------ANAC46            <---------ARR11(3)<---------ANAC46               <---------ZAT2          <---------ANAC58 <------NtERF2    ======================bZIP_DOF             --------->ZAT2          <---------ANAC58--------->LBD16 <---------YAB1--------->TGA1a                --------->O2    <------NtERF2 --------->ATERF1(1)<---------GLK1(1)  <---------TGA1a      --------->CCA1(2)  <-----------RAV1(2)<------NtERF2   --------->GLK1(1)  --------->O2 --------->LBD16 <-----------RAV1(2) <------NtERF2 <------NtERF2       <------ZmHOX2a(1) <---------ZAT18<---------LBD16<-----------HVH21 ------>At4g35610<---------ATERF1(1)----------->ARR10<---------WRKY38(1)  ----------->ARR10<------MYB83   agcggcagggtttcgtcggaggcggaggcggagaagaggagatcatctttaggagtccacgtgtaagaatccgggagagatttgaagtcaggtgggtttg  30207000                                           --------->WRKY12                                 *TSS                                     <---------WRKY38(1)     <---------ANAC58     <---------DAG2                              --------->ANAC46          ---------->DOF2           <----------DOF2   - --------->ALFIN1     <------ZmHOX2a(2)  --------->TOE2(3)   <---------ANAC58   ---------->ID1   <---   agagtgggatgtgaatgggatgcgatctaaacacatcgctcaacgttgaactcatgctaaaaggcttatgtgtttatattttggctttatgtttttggta  30207100                                        ------>ZmHOX2a(2)           <---------AtMYB61     <---------AHL20(2)        <----------DOF2  <---------ANAC46                                       --------->ZAT14  <---------YAB1        <------ZmHOX2a(1)----------->GT1                        <---------ZAT14     < -------->CCA1(2)       =======================HOX2a_HOX2a               <---------ZAT14    --------- ------YAB1<-----------RAV1(1) <-----------TBP                    --------->ZAT14           <--------   tgatatgatacttttggtggagaagaggagtgtatttatagatcggtgaaatactcgagactgaatagtgaagactgaagagtgaagagaagagtatatg  30207200                                                                 ---------->ID1                                   --------->YAB1     <-----------GT1<----------DOF2                             <---------MYB46(3)    <---------bZIP60(1) ---------ANAC46        <---------YAB1             --------->bZIP60(1)    <----------DOF2 >ARR14(2)          <---------GLK1(2)            <-------GAMYB<----------DOF2                     --- -ARR14(2)       ---------->ID1   <---------YAB1<-----------RAV1(1)  <---------DAG2               <--   tggagtaagttttttttttgtcgattcttattggttatcaaaaccattttctgttgtcacatttcttttcgcttttctttttttttttgtaagacaggtt  30207300                <-----------GT1               <-----------GT1              --------->AHL20(2)              <---------AHL20(2)           <---------AHL20(2)                                                <---------AHL20(2)          --------->AHL20(2)                                       --------->ATHB12          <---------AHL20(2)                                      <---------AHL20(2)           ------         <---------YAB1                                       --------->AHL20(2)         --------->AHL20(2)       --------->YAB1                             <---------At4g35610       --------->AHL20(2) <-----      <---------YAB1                              --------->At4g35610       <---------AHL20(2)<------   <---------YAB1   <---------YAB1  <---------ANAC58          <---------ATHB51         ----------->GT1 ------>ANAC55(2) --------->YAB1    <---------ANAC46          <---------ATHB12       ---------->DOF2 -------ANAC55(2)<---------YAB1     <---------ANAC58          <---------AHL20(2) ---------->DOF2   atgtgactattataaatttatcatttttgtgttttgtttcttggaaatagacagcttaaaacaaataattcattgtaattttataaagaaagaaaataca  30207400                                                    <---------AHL20(2)                                               <---------YAB1                                               <---------AHL20(2)                                            --------->AHL20(2)                                            <---------AHL20(2)                                            --------->AHL20(1)                                            <---------AHL20(1)                                         --------->AHL20(2)                                        <---------AHL20(2)                                       --------->AHL20(2)                                       <---------AHL20(2)   <---------ANAC55(2)                                    <---------AHL20(2)      <---------ANAC58                                    --------->AHL20(2)      <---------ANAC58                                   <---------AHL20(1)       <---------ANAC46     <---------ANAC46              <---------AHL20(2)  <---------AHL20(2) <---------------AGL15     <---------ANAC58          <---------AHL20(2)   <---------ICU4        --------------->AGL15     <---------ANAC58          --------->AHL20(2)  --------->AHL20(2)    ----------------->AGL3   <-----------GT1            --------->AHL20(2) --------->YAB1          ----------------->AGL1 --->ANAC55(2)             <---------AHL20(2)  --------->AHL20(2)        ----------------->AG ----ANAC55(2)    --------->YAB1   --------->AHL20(2)  <---------ICU4    ----------------->AGL2 -TEIL ------>ZmHOX2a(1)   --------->AHL20(2) --------->TOE2(3)   --------->ANAC46              -----   tattgtttcctgttgagaaataagaacatttatttaattaatttaaaatattaataaatatttcgtaaacacaatgccaaaaacagcaactagttttttg  30207500                                                                                         <--------HAHB4                                                                                         --------->YAB1                                                                                         <---------ICU4                                                                                        <---------YAB1          --------->ARR14(2)                                                          --------->YAB1          <---------ARR14(2)                                               <---------ANAC58       <---------ANAC46                                              --------->AHL20(2) --------->ICU4       <---------ANAC58       <---------ANAC55(2)                 --------->YAB1     <---------YAB1       <---------ANAC58       --------->ANAC55(2)   --------->AHL20(2)     <---------ANAC58  <---------AtLEC2          --------->AHL20(2)  --------->ICU4   <---------YAB1    --------->YAB1 ---->ATHB12             <---------ICU4       ---------->DOF2  --------->YAB1     <---------YAB1   atttgcaaggcgtatacaaacatacaagaattacatacttaaacaagataaagattatatatgtttcatcataaatttcgttttatgataatcattttgt  30207600  Previous    Next  AGI:  At1g80340.1    Description:  GA4H (gibberellin 3 beta-hydroxylase); gibberellin 3-beta-dioxygenase. Identical to Gibberellin 3-beta-dioxygenase 2 (GA4H) [Arabidopsis Thaliana] (GB:Q9ZT84;GB:Q9C970); similar to GA4 (GA REQUIRING 4), gibberellin 3-beta-dioxygenase [Arabidopsis thaliana] (TAIR:AT1G15550.1); similar to gibberellin 3-beta hydroxylase [Prunus subhirtella] (GB:BAD91162.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283) Range:  from: 30205585    to: 30207092    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version