Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->ANAC55(1)                                                --------->ANAC55(2)              <---------ICU4                    --------->ANAC58        --------->LBD16                         --------->ANAC58       ----------->GT1                          --------->ANAC46          <---------ANAC58       --------->LBD16                          <---------ANAC55(2)       <---------ANAC58       <---      <---------LBD16                 --------->ZAT6                  <----------DOF2   <---------MYB59     <---------LBD16  --------->ICU4----------->RAV1(1)     --------->ANAC58         <---------CCA1(2)    ------->TEIL      <-----------RAV1(1) <-----------HVH21 --------->ANAC46       ----------->GT1 ------YAB1  --------->ICU4      --------->ETT(1)           --------->ANAC58     <---------ANAC46----   tgaatggaccgggaaattatcgcaatgttggattgtcgcaacactatcacacgtaattgttcaagcctcatgcttttcttgtgtctggtatctaatttcc  30185500         <-----------GT1      ------->TEIL       --------->ZAT14   --------->ANAC55(2)   --------->ZAT18   <---------ANAC55(2)   <---------ZAT14 ------YAB1         ---------->DOF2                             <---------TOE2(3)               ----- -->ZmHOX2a(1)    <---------YAB1             --------------->AtSPL8                             -----   tgattatgtattttctgtttataaaagttcactgttttgaattagacattgtacaaaactgctatcaaggtttaaaaaaaaaaaaacattgttaacattc  30185600         --------->YAB1         ----------->HVH21                                 ----------->GT1        <---------ATHB12      <---------ICU4                                    ---------->DOF2        --------->ICU4 <---------ARR11(3)                                  --------->ANAC58   --------->ANAC58    <-----------ARR10                                   --------->ANAC58   --------->ANAC58    --------->ARR11(3)                                  --------->ANAC46 ---->TOE2(3)---------->DOF2  --------->YAB1           --------->AHL20(1)  <----------ID1 ---->YAB1 <---------YAB1    <---------ATHB12  --------------->AtSPL8--------->MYB46(3)    ----------   ttaacaagaaatcatcaaagtttaaaatctaatcgtgaccctactatgcatagtacatatattaagcattaaccaatacgacaaaagaaaaaaaaaagca  30185700                                                         ----------------->AGL2                         <---------TOE1(3)               <-----------------AGL3                         <---------TOE2(3)               ----------------->AGL3                    <---------ICU4                   --------->DAG2                    <--------HAHB4               <---------ANAC55(2)        --------->ANAC58                   --------->ICU4                <---------YAB1             --------->ANAC58                   <---------YAB1                <----------ID1 <---------TOE2(3)            <------ZmHOX2a(1) >DOF2     ---------->DOF2            <---------YAB1---------->DOF2       ---------->DOF2   <--------   ttaaccaaaaacaaaaagacgataattaaggttataggttatgagtttattacgaaaagcccatttatggatgcaattaagcaaaccttgttggaggaca  30185800                          --------->TOE2(3)                   --------->TOE2(3)                                                              ---                  ----------->GT1             <<<<<<<<<TAC1                                      <---                  <---------ANAC55(2)         --------->ANAC46                                  <----          ---------->DOF2 --------->TOE1(3) --------->ZAT6                                      ----- ----------->GT1 <-----------------------TaNAC69(2)                <----------DOF2              <---- --ID1---------->DOF2---------->DOF2   <----------DOF2 ---------->ID1           *TSS   --------->ZAT14   aaatggtcaaaagaaagaaaacgtaaaaccctaaaacatttctttaacactcgacttgtctcataaaccctttgtgtttgtagtctctctactctctaga  30185900                                         --------->ANAC55(2)                                         --------->ANAC58                                         --------->ANAC55(1)                                         <---------ANAC55(2)                                         --------->ANAC46                                         --------->ANAC58                                   <---------ANAC58          <---------ANAC58         <---------ANAC58          <---------ANAC58        --------->At4g35610       <---------CCA1(2)          <---------At4g35610 --->ZmHOX2a(2)                 <---------ZAT18 ---ZmHOX2a(2)                 <---------ANAC46                ------>ZmHOX2a(1) -----ARR14(2)                 <---------ANAC58           <----------DOF2 ---->ARR14(2)                 <---------ANAC58       <---------GLK1(2) <---------ANAC58 -----ARR11(3)             <----------DOF2       ------>ZmHOX2a(1)      <---------ANAC58       <-----   tcccatcccatttcttgatcagcctcgcgcattgtgtgcttacacgtaatcctctagcttctttcctcggtattccttgtctaattcgaacttctctctt  30186000                                                                                                -----                                                                                                <----                                                                                                <----                                                                                              -------                                               --------->GLK1(2)                            <------MYB83                              <---------ANAC58 <---------ARR14(2)                           <--------               ------>ZmHOX2a(2)    <---------DAG2                                          <------MYB46(1)              <------ZmHOX2a(2)  --------->ARR14(2)                      --------->TOE2(3)  <--------        <---------PCF2        <---------ANAC55(2) <---------YAB1        <---------YAB1      <--------        <-----------HVH21     <---------ANAC58 ------->TEIL            <---------TOE2(3)   --------->MYB55(2)    <---------LBD16      ---------->DOF2       --------->ARR14(2)  --------->YAB1          <---------MYB46(3) -----DOF2   <---------MYB52(1)  <---------ARR14(2)               <---------YAB1       <-----------RAV1(1)   tttttttctgggtccgatcgtttcagtgaaaggcgtaacctttccttcgaatctgatagcattgcaaaatgataatgttagtctgatttttgttgggtgt  30186100      --------->ATHB12                                                                    ------>ZmHOX2a(2)     <---------YAB1                                                                      --------->GLK1(1)  <----------DOF2                  <---------ARR11(3)                                    <------ZmHOX2a(2) ---->ALFIN1                 --------->LBD16                                             <---------GLK1(1) -----ANAC58       --------->ANAC58<---------GLK1(2)                                    <---------ARR11(3) -----ANAC58       --------->ANAC58--------->ARR11(3)                                   --------->ARR11(3) -->ALFIN1         ----------->GT1<---------RVE1(1)                  <---------TOE2(2)  <---------ARR14(2) -ANAC58         <-----------RAV1(2)        ------->GAMYB            <---------TOE2(3)  --------->ARR14(2) -ANAC46   ---------->DOF2  --------->HSFB2a(2)                <----------DOF2  <---------TOE2(3) -ANAC58<---------WOX13(1)  <---------HSFB2a(2) <------ZmHOX2a(1)    <---------TOE1(2) <------ZmHOX2a(1)   gtgtcttttgattgaaagagcaggtaatttccagagagattttcaacagaggaagcatgttcgctctttccaaggttttacgaaggtaaggatctctgat  30186200                                                               ----------->GT1                       ------->TEIL                          <---------ANAC46                    <---------REM1(1)                     --------->GLK1(1)                  --------             <---------MYB52(1)                          <---------GLK1(2)                  <--------            <-----------HVH21  ------->TEIL     --------->At5g28300                 <---------AtLEC2   tttgttcgaaaaactgttagggatgtagctatgtatgtgtcttcaatggcagtgaaacagatttcgagtaaaatttgaaattttgagcatggttttgatt  30186300                       <------MYB46(1)       <----------DOF2         <---------HSFB2a(2)               --------->REM1(2)    <----------DOF2                  --------->HSFB2a(2)       <-----         --------->ARR14(2)     --------->ZAT18                    <-----------GT1             <-----     <---------TOE2(3) <------MYB83 <---------DAG2      <---------ANAC58              ------>NtERF2 ->ATHB12<---------ARR14(2)     <---------ZAT18         <---------ANAC46  --------->ANAC58    <------ -YAB1  <---------CCA1(2)     --------->At4g35610       <---------ANAC58  --------->ANAC58    <------   tgccattaacatatctgtgttgagttggtattagcacacttttccaacttttgtttttgtgtgtgaattttacagaacgcagagactccgactgggagct  30186400  Previous    Next  AGI:  At1g80260.1    Description:  EMB1427 (EMBRYO DEFECTIVE 1427); tubulin binding. similar to tubulin family protein [Arabidopsis thaliana] (TAIR:AT1G20570.1); similar to hypothetical protein OsI_037774 [Oryza sativa (indica cultivar-group)] (GB:EAY83815.1); similar to hypothetical protein OsJ_035359 [Oryza sativa (japonica cultivar-group)] (GB:EAZ21150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61281.1); contains InterPro domain Spc97/Spc98; (InterPro:IPR007259) Range:  from: 30180677    to: 30185573    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g80270.1    Description:  DNA-binding protein, putative. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT1G15480.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63034.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 30185880    to: 30188399    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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