Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <-------GAMYB                                                                                        <---------ANAC46                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                       <------MYB46(1)                                                                                       <---------MYB46(3)                                                                                       <------MYB83                                                                                       --------->MYB52(2)                                                                                       --------->MYB55(2)                                                                                       <---------DEAR3(2)                                                                                      --------->MYB111(1)                                                                                      <---------AtMYB61                                                                                      <---------MYB46(3)                                                                                     <--------P                                                                                    <-------GAMYB                                                                                   --------->MYB52(2)                                                                                   --------->MYB111(2)                                              <---------GLK1(2)                    --------->MYB55(2)         <------NtERF2                        --------->ARR14(2)         --------->At4g35610        --------->LBD16                   ------>ZmHOX2a(1)         <----------DOF2<---------MYB46(3)       <---------ANAC46                 ------>ZmHOX2a(2)   <------MYB46(1)       --------->ALFIN1      <---------LBD16                 <---------ARR11(3)    <------MYB83 <---------At4g35610      <------NtERF2               --------->YAB1           --------->MYB59    ------->TEIL    --------->ALFIN1            ------->TEIL  <---------ARR14(2)--------->KAN4(2) <---------AtMYB61    <---------DEAR3(1)         <---------CCA1(2)        <---------MYB46(3)   --------->MYB52(1)   atggagttggcggagaatgcagagcatggtcttgaatcttgatcctcatattctctggtgtttggtcattctttctgatgaacggtggttggttgcaaat  30180300                    ------>ZmHOX2a(1)             <------MYB83             <------MYB46(1)                                                              --------->ATHB51            <---------AtMYB61  <---------ANAC46  <---------ANAC58                         -------->ATHB1          <------ZmHOX2a(1)    ----------->GT1   <---------ANAC58                        <---------YAB1        <---------TOE2(3) <---------ANAC55(2)   --------->At4g35610              --------->DAG2  <---------YAB1   --------->TOE2(3)  ----------->GT1 <----------DOF2           ---------->DOF2   ---   gtttgtaattgaggatggtgtccttaatacgtagagtatatagcaaaattagcttactttgtggtctctggacaaaattttgaaaagttgtattattgta  30180400                    <---------TOE1(3)                    <---------TOE2(3)                   <---------At5g28300                  <-----------GT1                  --------->MYB52(1)                                   <---------ARR14(2)              <---------TOE2(3)                  <-------GAMYB         --------->ARR14(2)            <---------AHL20(2)                  <---------ANAC58--------->MYB52(1)            --------->AHL20(2)        <------MYB83            <---------MYB59        <---------AHL20(2)            <------MYB46(1)<---------ANAC46  <---------ZAT14        --------->AHL20(2)          <---------WOX13(1)        --------->AtMYB61                    <-       --------->AHL20(2)         --------->ATHB12<---------MYB52(1)   --------->ZAT14       -------- <-------TEIL <---------TOE1(3)  <---------YAB1 <---------ANAC46------>MYB83         <-----------HVH21 -------->GT1---------->DOF2 --------->ATHB12   <---------ANAC58------>MYB46(1)      <-----------TGA1   tggttcatatttaattaaagttacggtttcttcatttgattggtgaagttgcgttgtttgaagaccaaacgagtataccgcttccttcgtcatctctgac  30180500                                                                                         --------->ICU4                              <---------ICU4                                       <---------------AtSPL8  <---------------AtSPL8     --------->ICU4                               <---------CCA1(2)    <-----  --------------->AtSPL8--------->YAB1                    <---------HSFB2a(2)  <---------YAB1-------- --------AtMYB61        ----------->GT1       --------->YAB1          <-----------HVH21  <---------YAB1 --->HVH21             <---------TOE2(3)     <---------YAB1 ---------->DOF2  --------->YAB1 <--------   attggtggtacttgaaaatgcaactatggtaaaaatttcttagggtgatcataaactattctaaaagcatggggtcatatcatgaatagtactgattata  30180600                                                                              --------->ANAC58                                                                              --------->ANAC58                                                                             <------NtERF2                                                                             *TSS                                                                             --------->ATERF1(1)                                                       --------->LBD16      <---------ATERF1(1)                                                      <---------ANAC58      ------>NtERF2                                   <----------DOF2    <---------ANAC58     --------->DEAR3(1)     --------->DAG2          <---------------AtSPL8   <---------ANAC55(1)  <---------DEAR3(1)    ---------->DOF2          --------------->AtSPL8   <---------LBD16      ----------->HVH21  ------>ZmHOX2a(1)   --------->ANAC58        ----------->GT1           =======================HOX2a_HOX2a --------->TOE1(3)    --------->ANAC58       ----------->GT1      <------------CBF --------->TOE2(3) --------->WRKY18(1)    ---------->DOF2      ------------>CBF ----YAB1     --------->YAB1 --------------->AtSPL3   <---------ANAC46  ------>ZmHOX2a(2) ->YAB1  --------->ZAT18     <---------------AtSPL3  <---------LBD16    <---------DEAR3(1)----------- -YAB1  ----------->GT1     ---------->DOF2 --------->DAG2<--------P --------->ATHB12   ------>ZmHOX2a(1)   aatccttaaagtgcaaaaatagtcaaggaagaaagtacttttacaaaagggtaattccgggtaaatgcaattgatcggcgacgcattctcctctcacagt  30180700                                                <---------GLK1(1)                                       <---------ANAC58                                            --                                       <---------ANAC58                                     ------->GAMYB                                      <---------ZAT2                                       --------->ZAT6                                      --------->ZAT2      --------->SPL7                 <-----------GT1     <-----------HVH21               --------->ANAC58  --------->TOE2(1)                 --------->MYB52(1) >HVH21               <-------TEIL   --------->ANAC58  --------->TOE1(1)          --------->YAB1   <-   ctctctcagtcactggctctcaaattcatactacttggcaagcttgctcgatttccctcgtacagccaaattgtgctatgggaatcaaaattaacagtcg  30180800           <---------ICU4           --------->YAB1                         --------->LBD16           -------->HAHB4     --------->At4g35610<---------ANAC46  --------->LBD16          <---------ATHB51    <---------ZAT2     <---------ANAC58  --------->At4g35610          --------->ICU4      <---------At4g35610<---------HSFB2a(2)        --------->YAB1        --------->ZAT2     <---------LBD16  --------->DEAR3(1)     ----------->GT1    <---------ANAC58         --------->HSFB2a(2)<------NtERF2 --------->ANAC58       <---------ANAC58         <---------ANAC58 --------->RAP2.6(2)   <---------ARR14(2) --------->ANAC58       <---------ANAC46        <---------LBD16  --------->RAP2.3(1)    --------->ARR14(2) ------->At4g35610   <---------MYB52(1)  --------->TOE2(3)  --------->ALFIN1         --------->YAB1 --------At4g35610 <---------MYB46(3)    --------->TOE1(3)<---------ANAC46       <---------ALFIN1   cagaagccagtaataatggagtcgttgcttcgagctgatcaaaccctaattccgggagcgatgtgtagccgcagagtttggacacactcagaactggctc  30180900                                      --------->ANAC46                                      --------->ANAC58                                    ----------->RAV1(1)                                   --------->ZAT18                              <--------P                          ------>ZmHOX2a(2)                        <---------ARR14(2)                        --------->ARR14(2)                                                  <--------                        <---------AGP1--------->ANAC58           <---------ANAC58      ------>ZmHOX2a(1)                        --------->ARR11(3)                       <---------ANAC58     --------->TOE2(3)             <---------ARR14(2)    <---------ZAT18         <----------DOF2         --------->ARR14(2)             --------->ARR14(2) --------->ANAC58      <----------DOF2              ------->TEIL             --------->MYB52(1) --------->ANAC58     <---------ICU4                <---------ARR14(2)   ttccctcagtgagcgtaactgaattggatctggtaagcccacacaattctctcaatcttttcttttgacttgttcagtttctatgtatcctcaatttctt  30181000                                                                                                 <---                                                                  --------->MYB52(1)             ----                                                                  ------>MYB83           ---------->DOF2                                                                  ------>MYB46(1)     <------NtERF2                                                                <---------MYB59       >>>>>>>>>E2Fd                                                          --------->HSFB2a(2)         >>>>>>>>>E2Fc                                                          <---------HSFB2a(2)        ------>NtERF2                                                         <---------LBD16             ----------->RAV1(1)                                                    --------------->AGL15           --------->ANAC46                                                    <---------------AGL15           --------->ANAC58                               <---------AtLEC2    <-----------------AGL3           --------->ANAC58                           <----------DOF2         <-----------------AGL2          <---------LBD16                        --------->ANAC58           ----------------->AGL1          --------->LBD16  -                        --------->ANAC58           <-----------------AGL1         <---------ANAC58  - -ARR11(3)          --------->YAB1 <---------ARR11(3)<----------DOF2              <---------ANAC58---   cgttgaataggtgagaggtctattacaagctttgcaaggtctgtctagtcccttccttttctgggaccaaactggacaaactttccgcgccaaaagtcat  30181100                                                                --------->REM1(1)                                                            --------->LBD16                                                           --------->ANAC58                                                           --------->ANAC46    <---------CCA1(2)       <---------RAP2.6(3)            --------->ANAC58  --------->ANAC46      --------->ANAC58                  <---------LBD16 ------ARR14(2)         --------->ANAC58               ------->TEIL                             ----- ----->ARR14(2)     --------->ANAC46                   --------->ARR14(2)                    -------- -------->ANAC46    --------->ANAC58                   <---------ARR14(2)                    -------- -------->ANAC55(2) --------->ANAC58                  <---------CCA1(2)                      <------- ------>CCA1(2)---------->ID1                       ------>ZmHOX2a(1)             <---------ANAC46  -   atacgcgtctctcatttgtctcactcaagccttcatgttcttctcgctgggttcctgtatcccgctacatgtttgaaactcgttgagtctatcgttgctg  30181200  Previous    Next  AGI:  At1g80245.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G00695.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G00695.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO47083.1); contains InterPro domain Spc97/Spc98; (InterPro:IPR007259) Range:  from: 30179070    to: 30180434    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g80260.1    Description:  EMB1427 (EMBRYO DEFECTIVE 1427); tubulin binding. similar to tubulin family protein [Arabidopsis thaliana] (TAIR:AT1G20570.1); similar to hypothetical protein OsI_037774 [Oryza sativa (indica cultivar-group)] (GB:EAY83815.1); similar to hypothetical protein OsJ_035359 [Oryza sativa (japonica cultivar-group)] (GB:EAZ21150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61281.1); contains InterPro domain Spc97/Spc98; (InterPro:IPR007259) Range:  from: 30180677    to: 30185573    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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