Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <------NtERF2                   --------->RAP2.3(1)                   --------->ORA47(2)                   --------->ATERF1(1)                   <---------RAP2.6(2)                   <------NtERF2                  <---------At4g35610                  --------->At4g35610                  <---------ATERF1(1)                  ------>NtERF2                  --------->ATERF1(1)                 <---------ANAC58                 <---------ATERF1(1)                 <---------DEAR3(1)                 <---------ANAC46                 --------->ALFIN1          <-----------RAV1(1)          <----------DOF2          <---------ANAC46      --------->ZAT18------>NtERF2  <---------MYB52(1)--------->DEAR3(1) <---------DEAR3(2)--------->DEAR4(2) --------LBD16   <---------ANAC58                                  <-----------HVH21          <------ ----->ANAC58   --------->ATERF1(1)                               --------->O2     --------->ANAC58 ----->ANAC58  <---------PCF2                                     <---------O2     --------->ANAC55(2) ---->DOF2--------->ALFIN1                                        --------->TGA1a  <---------ANAC55(2) ---ARR14(2)  <---------DEAR3(1)                                  <---------TGA1a  --------->ANAC58 < -->ARR14(2)--------->ALFIN1                           --------->ALFIN1            --------->ANAC55(1) ---GLK1(2)<-----------HVH21                        <---------TOE2(3)             <------------------ >LBD16  <----------CDC5                        <----------DOF2   ==================================MYC_MYB >ANAC46--------->At4g35610                     ============================bZIP_DOF        <-------GAMYB   cgccggtatgcgctgtggggcgcggcctaaacatcggtagaagaacaaggctttgaggtgtttgagcctcgtgagggactcagagacgtaagagcgttgt  30134100                                                        ------->MYC3                                                        <-------MYC3                                                        ------->MYC2                                                        ------->MYC4                          --------------------->WRI1    ------->PIF5                        <---------At4g35610             <-------MYC4                      <---------ANAC58                  <-------PIF5                      <---------ANAC46                  <-------MYC2                      <---------ANAC58                 <---------PIF3(3)                    <-----------HVH21                  --------->TGA1a                    --------->REM1(2)                  --------->PIF3(3)                       ------                   --------->ALFIN1       ----------->RAV1(1)                 --------->LBD16 <------                 <---------ANAC46        --------->ANAC58                   --------->SPL7    <------              --------->ANAC58           ----------->HVH21        --------->DOF5.7(2)         -------              --------->ANAC58           --------->MYB46(3)       <---------MYB52(1)  --------->ANAC46            ---------->DOF2              --------->ANAC58--------->ALFIN1 <-----------HVH21   <------           --------->ARR14(2)  <---------ZAT18         --------->O2     ==========================HOX2a_HOX2a ---ANAC46 <---------ARR14(2)  --------->ZAT18         <---------O2     ------>ZmHOX2a(1) <---------ARR14(2) ------ZmHOX2a(2)<---------ANAC58       --------->SPL7 <---------TGA1a----------->RAV1(2) --------->ARR14(2) -----TaNAC69(2) <---------ANAC58--------->ZAT18    ---------------->PIF3(2)<---------LBD16<------ZmHOX2a(2)   ggatcacaagtcggaaacgccgtgtcgtctgagagcgctccgaacgacagagagaccacgtggtagacgttatcctggtccggcatacactcgatcccgt  30134200                                               <-----------HVH21                                  <---------ZAT18                                <------NtERF2<---------ATERF1(2)                                    <                                --------->At4g35610                                                 -                                <---------At4g35610    --------->YAB1                             <--                              --------->ATERF1(1)    --------->ANAC58    ------>NtERF2            ---                             <---------At4g35610     --------->ANAC46  <------NtERF2<-----------RAV1(2)                             --------->ATERF1(1)     --------->ANAC58  --------->ATERF1(1)    -------                             --------->At4g35610  <---------SPL7      <---------RAP2.3(1)   ---------                             <------NtERF2   <---------DREB2C(2)      <---------ATERF1(1)  <---------ANAC58 --------->At4g35610         <---------ATERF1(1)--------->PCF2       <---------DEAR3(1)    <---------ANAC46 <---------At4g35610       <---------RAP2.6(2)<---------SPL7   <---------ANAC58   <-----------HVH21 < --->LBD16            --------->ARR14(2)     --------->ATERF1(2)     --------->ANAC46      <---------ANAC58 ---ANAC55(2)         <---------GLK1(2)     <---------ANAC58   <---------ANAC58<---------ANAC58<----- ---ANAC58         <---------HSFB2a(2)  ----------------------->TaNAC69(2)<------NtERF2   <------NtERF2 -->ANAC55(2)      --------->HSFB2a(2) <---------MYB46(3) <---------ICU4<---------ANAC46--------->ARR14(2) ---ANAC58<------NtERF2   <---------LBD16   <---------ANAC58   <---------ANAC46<---------ANAC58<-----   gccatctccctcggcaaacgtctggaatcgcggcagcccagtcgttgccggtcgcacgcataatgtcgtagacggcgtcttgctcgtcaggctccgtgcg  30134300     --------->ATHB12    <------NtERF2    <---------MYB52(1)   <-----------HVH21   ------>NtERF2   <---------RAP2.6(3)  --------->RAP2.3(2)  --------->RRTF1(2)  --------->RRTF1(3)  --------->bZIP60(2)                                                                          ------  --------->bZIP60(1)                                                                          ------  <---------bZIP60(1)                                                                         -------  --------->DEAR3(1)                                                                        ---------  --------->RAP2.3(3)                                      <------NtERF2                 ----------->HVH21 <------NtERF2                                             <---------MYB52(1)           ------>ZmHOX2a(2) --------->RAP2.3(1)                                      <-----------HVH21            --------->At4g35610 --------->ERF1                                          --------->DEAR3(1)            <------ZmHOX2a(2) --------->ORA47(2)                                      <---------ANAC46              --------->CCA1(2) --------->RRTF1(1)                                     --------->ATERF1(1)           <---------ARR14(2) ---------ATERF1(1)                           <---------At4g35610  <------NtERF2      <-----------ARR10 -------->ZAT18                      <------NtERF2      <------NtERF2                 --------->ARR11(3) -------ABI4(2)                    <---------ANAC46--------->ALFIN1<---------------------WRI1-------- ------>ATERF1(1)                  --------->DEAR3(1)   --------->RAP2.3(1)           <---------ARR11(3) -->SPL7                          --------->ATERF1(1)  ------>NtERF2                  --------->ARR14(2) >LBD16             <---------ARR14(2)   <------ZmHOX2a(2)<---------RAP2.6(3)         <---------AGP1 ---------ZAT18     --------->ARR14(2)<---------ETT(2)--------->TCP20             ---------->DOF2---- ----ANAC58 <---------WRKY38(1)  <---------PCF2  --------->At4g35610           --------->At5g28300 ----ANAC58 <---------WRKY12    ----------->TCP11(1)  <---------PCF2<---------DEAR3(1)--------->AGP1   agcgccgtcattggtcatcgtgaatccagtttgtgggccgtcgatcagagcagatggggccgtcgagtcggaggtgatcacagtgaaagatctgaccaac  30134400                                                                                      <---------TOE2(3)                                                                                      <---------TOE1(3) >MYB46(1)                      <------NtERF2                                         --------->MYB59 >MYB83                 <---------ARR14(2)                                          *TSS -->MYB52(1)          ------->TEIL           <---------ANAC58           <---------ANAC58 >MYB46(3)         <---------ATHB12       <---------CCA1(2)             <---------ANAC46       <----- ->AtMYB61   --------->ANAC58 <---------ANAC46                          <---------ANAC58  <-------TEIL --->GAMYB   --------->ANAC58<---------LBD16 <---------ANAC58<---------MYB46(3)    <----------DOF2   ggagaaactatagacaagacaatgaatatttggcggaagaattcatatcgtgccatttcttagttgttgttgttgtgtgaatgcggtttaggttcgaaat  30134500                                                                             --------->LBD16                                         <-------TEIL                       --------->ANAC46                                       <---------PCF2           --------->ICU4                                       --------->TCP20--------->ANAC58      --------->ANAC55(2)                                      <------MYB83    --------->ANAC58     <---------LBD16                                      <------MYB46(1)<-------TEIL<---------ICU4                    --                                     <---------MYB46(3)        <----------DOF2                    ---        <---------ARR14(2)           --------->MYB55(2)------------>CBF <-----------HVH21         <--        --------->ARR14(2)     <------------CBF   <---------HSFB2a(1)  <----------DOF2       -------- -------CBF                 ------------>CBF----------->TBP <---------ARR11(3)            <------ZmHOX2a(1)   tgtcagtgtgtatatgtataattctgaagaaacaattggtgggtccataaaaacgttcgcaatgtctttatgactttcacgggataactcgaggagcgaa  30134600             <---------GLK1(2)                                                     ----------->HVH21           <---------YAB1                                                         ------>ZmHOX2a(2)           --------->ICU4                                                        --------->CCA1(2)         --------->YAB1                                                          <------ZmHOX2a(2)    <---------AHL20(2)                                                          <---------ARR11(3)   <---------AHL20(2)                         --------->ARR14(2)                --------->ARR14(2)   <---------AHL20(1)                <----------DOF2                            <---------AGP1   --------->AHL20(2)               <---------ANAC58                            --------->AGP1   --------->AHL20(1)               <---------ANAC58                            <---------ARR14(2) ------->AHL20(2)              <---------ICU4 --------->ARR11(3)              ----------->ARR10 <---- ------>AHL20(2)               --------->ATHB12<----------TaMYB80        <---------ZAT18      ------- -------AHL20(2)              --------->ICU4  <---------ARR11(3)         --------->ZAT18      ------- --->GT1<-------TEIL <---------GLK1(1)    --------->ANAC46         <-----------RAV1(1)      <--------   ataaataaaattcatgattctcgatttctgcatttattgctttcacgagatattcccttcattcgtcttgtgttgggccctagatccgaccgcttcgtga  30134700        --------->O2        --------->TGA1a        =============================================MYC_MYB        =============================bZIP_DOF        <---------O2     ----------->HVH21    --------->DEAR3(2)    --------->MYB46(3)  --------->ARR14(2) <---------PCF2                   <---------AHL20(2) -----DOF5.7(2)           <---------DAG2  <----------CDC5           <-----------RAV1(1) -->DOF5.7(2)        --------->DOF5.7(2) --------->At4g35610  <---------TOE2(3) ---->HVH21    ------>ZmHOX2a(1) <---------AHL20(2)   <-----------GT1              <---------AHL20(2) -ANAC46<---------TGA1a   <----------DOF2<---------At4g35610 <-----------GT1  <---------YAB1   acgggacccgacgtctccttatcgtttactttttttttatttgggctgagcccattttcccatttacgatatgttgggctattattcaatttgtattttg  30134800                                                                                     <---------ICU4                                                                                    --------->ICU4                                                                                  --------->YAB1                                                                                  <---------ICU4                                        <------------CBF   <---------YAB1 --------->TOE2(3)   <---------ZAT14        --------->MYB52(1)              <---------TOE1(2)      --------->ICU4   --------->ZAT14      --------->MYB46(3)                <---------TOE2(2)      <---------ATHB12   -   <---------ZAT18      <---------MYB52(2)      ---------->DOF2           --------->TOE1(3)  <-------   --------->ZAT18    <-----------GT1------------>CBF <-------TEIL      ------->TEIL<---------YAB1---   aactgggcactgtatttgtttttgtaacaaaccgtagatagcaattgataaaaagtttcatatgtttgattctgaaccttaaaatcattattttgttgta  30134900                                               <-------MYC2                                               ------->PIF4                                               ------->PIF5                                               ------->MYC2                                               ------->MYC3                                               <-------PIF5                 <-----------HVH21                            <---------DEAR3(1) <-------PIF4              <---------ANAC55(2)                           <---------ANAC46    <-------MYC3              <---------ANAC55(1)     --------->ARR14(2)------->MYC3            <-------MYC4              <---------ANAC58     --------->GLK1(2)<---------ANAC58   --------->DAG2                  --------->ANAC55(2)     <---------ARR14(2)<-------MYC3  --------->ANAC58            <-------MYC3    <---------GLK1(2) <---------ANAC46  ---------->DOF2          ------->MYC3 -------->ANAC46      <---------O2   --------->ANAC58         <---------ALFIN1  --------->At4g35610 --REM1(1)            <---------ANAC58 XXXXXXXXXXXXXXXXXXXX>MIR822       <---------ANAC58 <---------- ------>ZAT6  --------->MYB52(1)     --------->ANAC46       ----------->RAV1(1) <---------At4g35610   acacgagaatctgaataaacggacgcgtggtctgtgcatacgaaaagcacatgcccatggagcaacacatgtaatacgtgtcatcttactagtaacatga  30135000  Previous    Next  AGI:  At1g80080.1    Description:  TMM (TOO MANY MOUTHS); protein binding. Identical to Protein TOO MANY MOUTHS precursor (TMM) [Arabidopsis Thaliana] (GB:Q9SSD1); similar to leucine-rich repeat family protein [Arabidopsis thaliana] (TAIR:AT2G42800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62714.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 30132898    to: 30134484    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g80090.1    Description:  CBS domain-containing protein. similar to CBS domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G15330.1); similar to SNF4b [Medicago truncatula] (GB:AAO61675.1); contains InterPro domain Cystathionine beta-synthase, core (InterPro:IPR000644) Range:  from: 30134997    to: 30136833    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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