Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------ANAC58                                                                <---------ANAC58                                                                ==================================bZIP_DOF                                                             ----------->HVH21                                                     ----------->GT1        <---------ETT(2)                                                    --------->ALFIN1       <------NtERF2                                                 <-----------------------TaNAC69(2)                                                 --------->ALFIN1        --------->RAP2.3(2)                                                 <---------AtMYB61       --------->DEAR3(1)                                                <------ZmHOX2a(1)       --------->DEAR3(2)                                              --------->ALFIN1  <---------TGA1a        <----------DOF2     ---------->DOF2                   <------ZmHOX2a(1)   ----------->RAV1(2)   --------->ANAC58 ---------------WRI1     ---------->DOF2     <------ZmHOX2a(1)--------->MYB52(1) --------->ANAC58   < --->GT1  ----------->GT1=================================================bZIP_DOF   --------->At4g35610   aaattcacaaagcagaaaaacgaattacaaagaaatagaaaggatgaggaggaggtggtaaacctgacgagcgagccgtcgataagcagctttaatctcc  30113500                                                                            --------->LBD16                                                                           --------->O2                                                                           --------->DEAR3(1)                                                                          <------NtERF2                                           <---------HSFB2a(2)            --------->ATERF1(1)                                           --------->ANAC46          --------->MYB46(3)                                           --------->HSFB2a(2)       --------->ANAC58                                 <------NtERF2                       --------->ANAC58            <---                               <---------ANAC46                     --------->SPL7            <------NtERF2          <---------ARR14(2)   <---------ANAC58        <---------ARR14(2)------>NtERF2      <--------          --------->ARR14(2)   <---------ANAC58        --------->ARR14(2)<---------ATERF1(1)<-------- --------->ATHB12           --------->ALFIN1--------->LBD16        --------->MYB52(1)       <-------- ---------YAB1            --------->ALFIN1<---------LBD16 <----------ID1--------->PCF5   --------->DAG2   ttgttattggcagatttagagacaccgagagtggcgtagtagtctccggaagtagcaaatacgacgagggaacggccccgtcgatttcgataaggcgtag  30113600                                                           <------NtERF2                                                          <---------SPL7                                                          ------>NtERF2                                                         --------->ATERF1(2)                                                         --------->RAP2.3(3)                                                         <---------ATERF1(2)                                                         --------->DEAR3(1)                                                        --------->RRTF1(1)                                                        --------->ERF1                                                        --------->RAP2.3(1)                                                      --------->DEAR3(1)                                                      ------->GAMYB                                                     --------->ATERF1(1)                                                     --------->MYB46(3)                                                     --------->DEAR3(2)                                                     <------------AtMYB77                                         --------------->AGL15    --------->DAG2    <----------ID1                       <-----------------AGL3 ---------->DOF2 ------------------WRI1      --------->ARR11(3)      <---------ABI4(2)                              - -ANAC58                     <---------ARR11(3)    <---------ARR14(2)                           ----- -ANAC46           <----------ID1        --------->TOE1(3)<-----------HVH21                     <---- -ANAC58       ---------->DOF2     <---------YAB1  --------->ARR14(2)  <------NtERF2      --------->MYB52(1)   acgaagaagacgaagatgaaagcgacaagaagctcttgtgatacctgaaattggaaccgccgtcggaaaaggcagagaaattagaagagagggaacgggg  30113700                  --------->At4g35610             <---------At4g35610             --------->At4g35610             <------NtERF2           <---------DEAR3(1)          <------NtERF2          <---------At4g35610          --------->At4g35610         <---------RAP2.3(1)         ------>NtERF2         <---------ERF1        <---------RAP2.6(2)        <---------RAP2.3(2)        --------->ATERF1(2)        <---------ATERF1(2)        <---------DEAR3(1)       <---------At4g35610       --------->ATERF1(1)       <------NtERF2       <---------DREB2C(1)       --------->DREB2C(1)       --------->RAP2.3(1)       --------->At4g35610       <---------ABI4(1)      <---------DEAR4(2)      <---------ERF1      ------>NtERF2      <---------RAP2.3(1)      <---------ORA47(2)      <---------RAP2.6(1)      <---------ATERF1(1)      <---------RRTF1(1)     <---------RRTF1(2)     <---------DEAR3(1)     --------->DEAR3(1)     <---------RAP2.3(3)     --------->ATERF1(2)     <---------RAP2.6(2)     <---------ATERF1(2)     <---------RRTF1(3)     <---------RAP2.3(2)    --------->ATERF1(1)    <---------LBD16    <---------ABI4(1)                                                                              --  <---------DEAR3(1)                                                                           ------ -------->MYB52(1)<---------At4g35610                                                          ------ ->NtERF2<---------ATERF1(1)                                      <----------ID1               ------ -----PCF5--------->ATERF1(1)--------->ALFIN1             <------NtERF2                 <---------GLK1(2)   accatcggcggcggcagcgaagcagagagaagaggggatgagggagggagaagcgagggcagccattagagacaaaatggaatcaaacgagcttctcaag  30113800                   <---------ANAC58                   <---------ANAC58                        <---------HSFB2a(2)                  <---------HSFC1(2)                  --------->HSFC1(2)                  --------->HSFC1(2)                  --------->HSFB2a(1)       <------ZmHOX2a(1)                             <---------YAB1                            <----- ------>P <---------LBD16                        <---------------------WRI1                    ------ --->ANAC58      --------->GLK1(2)             ----------->TGA1                   ----------->GT1 --->ANAC46  <------NtERF2                  --------->ICU4 *TSS        <---------TOE2(3) --------->GLK1(2) --->ANAC58 --------->LBD16 ------->GAMYB <---------At4g35610---------->DOF2---------->DOF2<---------LBD16   ctaccaagaggacgcggagaagcttggcaacgggcattgttgagagatgatgacgatgattccaaaagcgttttaggctaaagagagtgaaattcgggat  30113900                           <-----------GT1                        --------->ARR14(2)                    <-------PIF5                    ------->MYC3                    <-------MYC2                    ------->MYC2                   --------->TGA1a                   --------->O2                   <---------O2                   ==============================bZIP_DOF                   ===================================bZIP_DOF                   ==========================bZIP_DOF                   <---------ANAC46                                           --------->SPL7                   <---------bZIP60(2)                                      <---------RAP2.6(3)         ------->TEIL   <---------ARR14(2)                                 <---------ANAC58    <---------ANAC46<-------MYC3               <---------AHL20(2)          --------->ANAC55(2)   <--- <-----------RAV1(1)------->PIF5           <----------DOF2                 <---------ANAC58      <--- ----ARR14(2)      <---------TGA1a    <----------DOF2          <---------ALFIN1              <------- --->ARR14(2)   ----------->HVH21 <----------DOF2   <-----------GT1  <----------DOF2---------->DOF2   tttgtggtgcgaacctcgctcacgtggattttcttcctttctttcctttttatttttctcttccatcacttcttttgccgtaacccaaaagtctcgtttg  30114000                                                       <---------ARR14(2)                                                       --------->ARR14(2)                                                    ------>ZmHOX2a(2)                                               <--------P                                             <---------MYB46(3)          ----------->GT1             <---------------AGL15                         <-----------GT1 ------ANAC58               <---------CCA1(2)--------->ATHB12                     --------->AHL20(2) ------ANAC58             --------->YAB1  --------->MYB52(1)      --------->HSFB2a(2) --MYB52(1)      <---------ATHB12     --------------->AGL15       <---------HSFB2a(2)            ----   cttatttcttacaggtaaaatcattcattcatatcatatactactaatggttgatccgattcgaattttcagaacaatgtcaaattatacagccctatgt  30114100                                                               <---------AHL20(1)                                                 <---------MYB52(2)                                                --------->At4g35610                          ---------->DOF2       <---------At4g35610                        --------->AHL20(2)   --------->At4g35610               ---------->DOF2                        <---------AHL20(2)---------->DOF2      --------->AHL20(1)               <---------GLK1(1)         --------->MYB52(1)   --------->AHL20(2)               --------->GLK1(1)----------->RAV1(2)    ---------->DOF2    ---------->DOF2 --->TEIL --------->TOE2(3)    ------->TEIL  <---------At4g35610  <---------AHL20(2)      <---------GLK1(2)   accaaaacacatccttgatttccaaaataaatgcgcctgagacaaacagcagcaaaccaaagaaatatataaaaaaaaaaggaaaggaaacagaatgttt  30114200                                                                                              <------                                                                                              <------                                                                                            <--------                                                                                       <---------MYB52(1)                                   <----------DOF2                                   <---------ANAC58                   <-----------GT1 <---------DAG2                                    <---------ANAC46          <---------ZAT14     --------->ANAC58                                       <---------ANAC58          <---------REM1(2)   --------->ANAC58                                    <----------DOF2          --------->ZAT14   ---------->DOF2                                     <--------------------     ------>ZmHOX2a(1)  --------->AtLEC2                           xxxxxxxxxxxxxxxx>smallRNA(i)   gtttgtcctgactacacagtattacaatgcaaaagcacttttgttttgtagtttgatatcgctctctctctctctctccctctactttcgtttattgcct  30114300                                                 --------->LBD16        <---------At4g35610                                               <---------LBD16   <------NtERF2                    <--     ------>ZmHOX2a(1)                       <---------SPL7     ------>NtERF2                  <-----     --------->At4g35610        --------->ARR11(3)             --------->ATERF1(2)             ------  ------>ZmHOX2a(1)             <---------ARR11(3)             <---------ATERF1(2)             ------ ---ANAC58           ---------->ID1         <---------TGA1a   <---------ANAC46                 <----- ---ANAC58        ------>ZmHOX2a(1)         --------->TGA1a   <---------ANAC58               <------- ---GT1          <---------ANAC58  ===================bZIP_DOF<---------ANAC58      <---------ALFIN1 ----ANAC81      <---------ANAC58  <----------DOF2      ------->TEIL    --------->At4g35610 <--------   tctcctcctctgcaagtgtccttgtcttcttggagagctttagaagacgtccggattgaatcttgctggcattgagttgccatgttccacttgctgcagc  30114400  Previous    Next  AGI:  At1g80030.1    Description:  DNAJ heat shock protein, putative. similar to DNAJ heat shock family protein [Arabidopsis thaliana] (TAIR:AT3G17830.1); similar to DnaJ homologue [Pisum sativum] (GB:CAA96305.1); contains InterPro domain Heat shock protein DnaJ, cysteine-rich region; (InterPro:IPR001305); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Chaperone DnaJ; (InterPro:IPR012724); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain Chaperone DnaJ, C-terminal; (Inte Range:  from: 30109859    to: 30113859    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g80040.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G32440.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67646.1); contains InterPro domain UBA-like (InterPro:IPR009060) Range:  from: 30114040    to: 30116173    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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