Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------YAB1                                                --------->AtMYB61   <------ZmHOX2a(1)                         <-----------GT1 <---------YAB1 --------->ANAC58                            --------->YAB1  --------->ICU4 --------->ANAC58   <---------ANAC46        --------->MYB46(3)<---------ICU4                     <--- ->ANAC58           <---------ANAC58   --------->ANAC46    --------->YAB1                       ----- ->ANAC58           <---------ANAC58   --------->ANAC55(2)<---------YAB1                  --------->ICU4 >DOF2       ---------->DOF2  >>>>>>>>>>>>>>>>>LFY      <---------CCA1(2)         <---------ANAC46   aacaaggacccaaaacaaagttccttgcattcttccactgtccgtaatcaccatcaccatatcattattcttctacccattttgtcttggaaatgatttt  30097400           <---------ANAC58                                                    ----------->GT1           <---------ANAC58                                           ------->TEIL                 <-           <---------ANAC46                                        --------->ANAC58              ----      <-----------RAV1(1)                    <---------------AGL15 --------->AtLEC2             <----    <---------ANAC58                         --------------->AGL15 --------->ANAC58        --------->LBD16    <---------ANAC58                     --------->MYB46(3)      <---------ANAC58        <---------LBD16  <-----------GT1                    <-------TEIL                <---------ANAC58      <-----------GT1 ------AHL20(2)              --------->REM1(2)                   <---------AtLEC2 <---------AHL20(2) ---->AHL20(2)              <---------ANAC46 ========================================================   aaattttcttgttgcttcttactgcaaactgtgtataggttcaactactccattgagttacacacttgcatgcacctatggaagttaattttccggtttt  30097500                                           --------->AHL20(2)                         ----------->GT1   <---------AHL20(2)                <---------WRKY18(1)      --------------->AGL15               --------->WRKY38(1)       <---------WOX13(1)               --------->WRKY12          <---------------AGL15     --------->AHL20(2)        <------ZmHOX2a(1) --------WOX13(1)   --------->MYB52(1)  <-----------------AGL3<---------AHL20(2)    <----------DOF2 ----->ATHB12  --------->WRKY45 <-----------GT1          ------->MYC3               <---------DAG2 -----YAB1  <---------MYB46(3)<----------TaMYB80         <-------MYC3    <-----------GT1    --------- =========================================================MADS_MADS<---------AHL20(2)      >>>>>>>GRF7   gattgatattcaagttgttgaccaatggagttatatacccttgatttatatagaaaccacatgttttatttatattaacatggtcacttttgtcaggatt  30097600                                                                         <-------GAMYB                                                                        <------MYB46(1)                                                                        <---------MYB46(3)                                                                        <------MYB83                              <---------TOE2(3)                         ----------->GT1    --------->DAG2                              <---------TOE1(3)                     <-----------RAV1(1)   ---------->DOF2                              --------->DAG2                       <---------YAB1    --------->AHL20(2)                      --------->DAG2 <---------At4g35610        <---------YAB1     ----------->GT1    ----------->RAV1(1)----------->GT1                        --------->YAB1      --------->DAG2 >ICU4 --------->YAB1---------->DOF2<---------ZAT6         --------->WOX13(1)    ---------->DOF2   aatagacaacaatagttgagagaaaaagtgataaggtagagctaatttgtattaaacttatcaattagtattgttggttaaaaaaaagttaataaagtag  30097700                                                                --------->YAB1                                                                <---------ICU4                                                         <-------TEIL                                <---------ARR11(3)    <------MYB46(1)                                --------->ARR11(3)    <------MYB83                       ----------->GT1              <--------P <---------YAB1                      ----------->GT1             <---------REM1(1)      <---------REM1(2)         --------->KAN4(2)  ---------->DOF2    <-----------RAV1(1)     <---------ETT(2)    ----------->GT1 --------->TOE1(2)    <-----------HVH21   --------->YAB1    ----------->GT1   tcaagttggataattcccaaaaactgggaaaaaagaactcaagcgtcaaatgttgtaggtgcatcatcatcagtctacaagtagtaaaaaacccattcga  30097800                                                                                            <--------                  ---------->DOF2                                                       <---------ICU4                 *TSS                                                                   --------->YAB1                ------->GAMYB                                    <----------DOF2       <---------YAB1               --------->ANAC58                                 <---------ICU4         --------->ICU4               --------->ANAC58                               --------->GLK1(2)       <---------AHL20(1)             --------->MYB52(1)                        --------->YAB1                 --------->AHL20(2)             ------>MYB83                       --------->WOX13(1)                    <---------AHL20(2)             ------>MYB46(1)                 --------->ANAC46--------->YAB1          --------->YAB1           --------->MYB46(3)        ---------->DOF2   --------->TOE2(3)            <---------YAB1           <---------MYB55(2)      <---------REM1(2)--------->WOX13(1)           <---------YAB1          --------->ANAC46       <---------ETT(2) <---------ATHB12            <-----------GT1   tttgataagaagacccaacggaaagagtcttcccgtctacaaagtaaacccaatcaatcttaataatctttaagaggttttttcttattataattatcta  30097900                          --------->YAB1                      ============================HOX2a_HOX2a                      ------>ZmHOX2a(2)                     <---------GLK1(1)                     <------ZmHOX2a(2)                     --------->GLK1(1)                     =============================HOX2a_HOX2a                    --------->ARR14(2)                    <---------AGP1                    --------->ARR11(3)                    <---------ARR11(3)                        ------>ZmHOX2a(2)                    <---------ARR14(2)                       --------->GLK1(1)                    <-----------ARR10          --------->GLK1(2)             <---------CCA1(2)                   <---------CCA1(2)          <---------GLK1(2)   ------>ZmHOX2a(1)          --------                   <---------ARR14(1)         --------->ARR14(2)  --------->LBD16           ---------                  --------->LBD16             <---------ARR14(2)----------->RAV1(2)         <--------                --------->At4g35610         ----------->ARR10<---------GLK1(1)            <---------ZAT6                <---------LBD16            ==========================HOX2a_HOX2a      --------->LBD16 ---GT1         <---------At4g35610        <------ZmHOX2a(1)--------->ARR11(3)       <---------ANAC46   tctctctatctatctatctgcggatctctcatgaagaaacactgaggagattctctcgctctgatctcctggtatcgtcgtctctctccgtagagatata  30098000                     <---------WOX13(1)                                                           <--                    <---------ANAC58            <---------TOE1(2)                                 <--                    <---------ANAC58      ------>ZmHOX2a(1)                                       <--                 <---------WOX13(1)   <-----------GT1                                       ---------     ---------->ID1--------->ATHB12<---------AHL20(1)                                     <---------At4g35610  --------------->AtSPL8           <---------AHL20(2)                                     <------NtERF2 ->CCA1(2) --------->ARR14(2)      --------->AHL20(1)                                     ----------- >ARR11(3) <---------ARR14(2)      --------->AHL20(2)                              --------->ATHB12 -ARR11(3)<---------CCA1(2)    <---------AHL20(2)         <---------MYB52(1)     <---------WOX13(1)<-   ctagtttgtcccatatccgattgattgctctattcaatttattcctcttctaggttttcggtttggccctccgatttagagggattgatggcccctgatg  30098100                                                                   --------->ANAC58                                                                   --------->ANAC58 -------ANAC58                                          --------->ANAC46            <---------TOE2(3) -------ANAC46                                         <---------LBD16         <---------YAB1 -------ANAC58               ------>NtERF2            <---------ALFIN1       --------->YAB1         < -->HVH21        --------->YAB1         --------->MYB46(3)   <------ZmHOX2a(1) --------->ICU4       - >RAV1(2)  ------>NtERF2  ------>ZmHOX2a(2)          <---------REM1(2)      --------->ICU4        --- ------GAMYB    <---------YAB1        <-----------GT1<---------ZAT14    <------NtERF2 <------ZmHOX2a(1)   gcgttgaagactccgactatgagagtgatcccgacgagttgaaccgctccttggctacacggaggagagaagccagcgatgatgatgaggatgatgaaga  30098200                      <---------At4g35610                      --------->ZAT2                      --------->At4g35610          --------->YAB1   --------->WOX13(1)                                            <------ZmHOX2a(1)         <---------YAB1  --------->At4g35610                                      <---------ICU4   <---------ETT(2)   <---------ZAT2       <---------At4g35610                   --------->ICU4  --------->SPL7--------->TOE1(2)          --------->At4g35610                 --------->YAB1 ------>NtERF2 --------->ZAT2     --------->ARR14(2)                 --------->ETT(2)  <---------TOE2(3) ---------SPL7 --------->At4g35610<---------GLK1(2)         <---------MYB46(3)<---------YAB1 -------->ZAT18<---------At4g35610<---------ARR14(2)     <---------ANAC46   <---------At4g35610 ------>At4g35610  <---------ANAC46 <-------TEIL      --------->ALFIN1      --------->YAB1   agcggacgaccatgataagctgcgagcagcaatccagattcattccgatgaacacagtggtgttgttgttgtcgactctgatgataatgaaggattgcac  30098300  Previous    Next  AGI:  At1g80000.1    Description:  similar to glycine-rich protein [Arabidopsis thaliana] (TAIR:AT1G15280.2); similar to Os01g0595100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043467.1); similar to glycine-rich protein-like [Oryza sativa (japonica cultivar-group)] (GB:BAD52900.1) Range:  from: 30097817    to: 30102058    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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