Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             ------>MYB83                                  ----------->RAV1(1)      -------->P                               --------->ANAC58          --------->AtMYB61                               --------->ANAC46          --------->MYB46(3)                               --------->ANAC58          <---------ALFIN1                               --------->AtLEC2          <---------MYB111(1)                          --------->ANAC58           <---------ZAT18                       <---------ZAT2                <---------ZAT14 -------->GT1          --------->At4g35610           --------->ZAT18 ---ZmHOX2a(1)         <---------At4g35610           --------->ZAT14    --------->ICU4 -->At4g35610          --------->ZAT2  <-----------RAV1(1) ------>MYB46(1) ---WRI1   ---------->DOF2--------->ANAC58       <-----------RAV1(1)  <---------------AGL15   gagtagaatgggcgaaaggaagttcagctagccaagcaacaatgttggacactggtgcaccaactctgactgcaatttttagtgacttcaaatactaaga  30090300                                                                        <---------ANAC46          <--                      <----------DOF2                                   <---------ANAC58       <-----                   ---------->ID1                                       <---------ANAC58       ------       --------->ANAC55(2)             --------->TOE2(3)           <-----------RAV1(1)   <-----------GT1       <---------ANAC55(2) <---------AtLEC2                 --------->ATHB12<----------DOF2    <-----   ctttggaatacgtttcaatttgttcttttgtatgaaaaaaacattagactcgaataggttattgatttcatgttgcttcttttttttgtttatactggat  30090400                              <---------ANAC58                              <---------ANAC46                        --------->MYB46(3)           ------>ZmHOX2a(1)  <---------ANAC58                      <-----------GT1 ---------GT1             <----------DOF2                 --------->YAB1                           <- ----ARR14(2)           <---------ZAT2   >>>>>>>>>>>>>>>>>LFY    <----------DOF2              <------ --->ARR14(2)           --------->At4g35610              <---------YAB1              ------>ZmHOX2a(1) ----GLK1(2)            <---------At4g35610            --------->YAB1<---------At5g28300     <-------   tttctcttctatcctctacttggtgcagctttgtgtgttttaaaaccagtgtctcattcatcatactcttttaccaccaattgaatccttccaatttact  30090500                                                                             --------->SPL7                                                                             --------->ABI4(2)                                                                             --------->ZAT14                                                                             <---------ZAT18                                                                            --------->ALFIN1                                                                       <-----------GT1                      --------->ZAT14       <---------RAP2.6(3)       --------->ARR14(2)                      <---------ZAT18       <---------SPL7         ------>ZmHOX2a(1)----------->GT1         ----------->GT1       ----------->GT1--------->SPL7       <---------------AGL15      <---------ANAC46<---------ZAT14--------->DAG2               <-----------------AGL3    <---------LBD16 --------------->AtSPL8 --------->DEAR3(1)<---------ARR11(3)  --------->WRKY18(1) ---------DOF2   <---------At5g28300---------->DOF2          --------->ARR11(3) <-----------HVH21 ---At5g28300   <-----------GT1--------->ANAC58           <-----------GT1--------->ANAC46        ---- ----GT1----------->GT1        --------->ANAC58        ----------->GT1<---------ARR14(2)     --------   gttttttgggggggaaaattactgtgtactaacaagtaaaaagggccgtccgtcaaaatgtaacatctcctatatacggtgcggtcaagttaaaaaaaag  30090600                                                                        --------->ZAT18                                                 <---------ARR14(2)     <---------ZAT14                                        --------->HSFB2a(2)            --------->ANAC58                                     ==========================HOX2a_HOX2a                        ---                                     ------>ZmHOX2a(1)       --------->ARR14(2)                   <--                                    --------->TOE1(2)   <------ZmHOX2a(2)                     <------       ----------->GT1             ------>ZmHOX2a(2)   --------->ARR14(2)                     -------       --------->ANAC55(2)        <------ZmHOX2a(2)    <---------ARR14(2)                    --------       <---------ANAC55(2)       --------->ARR11(3)    --------->AGP1  --------->ANAC58    --------->AtMYB61       >>>>>>>>CAMTA3            <---------ARR14(2)   --------->At4g35610                  --------->ANAC46  <---------ARR14(2)             --------->ARR14(2)   <---------At4g35610   *TSS           <---------ALFIN1  --------->ARR14(2)             <---------ARR11(3)<-------TEIL       ------->GAMYB       --------->MYB46(3) ------->GT1        --------->O2--------->GLK1(1)--------->ARR14(2)------>NtERF2  --------->ALFIN1<-- -->DOF2            <---------O2<---------GLK1(1)<---------GLK1(2)--------->DEAR3(1)   <------ZmHOX2a(2)   agcaaaaacgcgtgataaaacgacgtcgaattagagatcctactagacccagattcagatccaaatcgccaacgcgcactggaagtgggatcaccaccac  30090700                                                                 <---------GLK1(1)                                                                 <------ZmHOX2a(2)         <<<<<<<<<TBF1                              --------->LBD16      <-------TEIL      <<<<<<<<<TBF1                             --------->ARR14(2)      <-----------HVH21  <----------DOF2                               <---------ARR14(2)------>ZmHOX2a(2) ------>ZAT14                           --------->At4g35610      --------->GLK1(1) -------ZAT14                         <-----------RAV1(2)       <---------ARR14(2) ---ALFIN1                           <------ZmHOX2a(2)          --------->ARR14(2)               ---- -->AtMYB61               ------>ZmHOX2a(2)------>NtERF2   --------->GLK1(2)     <-------TEIL  ------ ->MYB46(3)   <-----------HVH21     <-----------HVH21 <---------ETT(2)--------->LBD16       --------- -------ZAT18 <-----------TGA1----------->RAV1(2)  <---------ANAC46 <---------LBD16 <---------MYB52(1)   tgcgcttcttcttcttcgtcatctctgatcccccctgcgatcaggggccatttccgtcgataatccgatctccggttcagacattcgtttggacttgcaa  30090800                                              <---------ARR14(2)                                      ------->TEIL                                      -------->P                                    =====================HOX2a_HOX2a                                    ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)             <---------ANAC58                       <---------GLK1(2)      --------->ARR14(2) <---------ANAC58                ------>ZmHOX2a(2)  ======================HOX2a_HOX2a              --------->ARR11(3)  <---------ARR11(3)           <-----------GT1               --------       ----------->HVH21          --------->AGP1           --------->AHL20(2)                -------- ----->ICU4   <---------ARR11(3)  <---------AGP1  ------>ZmHOX2a(1)                          -------- ---->DOF2--------->bZIP60(1)     --------->ARR14(2)       <---------AHL20(2)                <------- >AtLEC2  <---------bZIP60(1)     --------->ARR11(3)<----------DOF2   <---------GLK1(1)      --------   agatggtgagtgacatgatctctcagtttctccatagatctacctctgaatcctctttcaattttttacttgaaatctcatttctgggctagtctacgta  30090900        <---------ICU4        --------->ATHB12                                                 --------->LBD16       <---------YAB1                                                   <---------ANAC58       ------>ZmHOX2a(1)                                 <---------RVE1(1)                          - --------->ALFIN1                                        <---------CCA1(1)                     ------ ->ANAC58             XXXXXXXXXXXXXXXXXXXX>MIR870       --------->ARR11(3)                    <------ ->ANAC55(2)<---------ZAT14                             <---------ARR11(3)     <---------AtMYB61    < ->ANAC58   <---------ZAT18                          --------->SPL7     <---------ANAC55(1)  <------- --ANAC55(2)--------->ZAT14                        --------->TOE1(2)    <---------ANAC46     -------- ->ANAC46   --------->ZAT18                   ---------->DOF2           <---------ANAC58  <---------GLK1(2)   agagtgttcctcattgcactaaaatttgatgttccttcagtcatcccctaaatcgaacgatattttctactatgccgtgttttggtttctcagaatatca  30091000       <---------------AtSPL8       --------------->AtSPL8    <---------YAB1                                 <---------MYB59 -------->ANAC55(2)                                --------->TOE2(3) --->YAB1                                          --------->TOE2(2) ---YAB1                                         -------->P             --------->ETT(2) ---------ANAC55(2)                           <---------MYB52(2)  <----------DOF2        --------->ANAC58 --ARR11(3)                       <-----------------AGL1      <---------ANAC58           --------->ANAC58 ->ARR11(3)          <---------AHL20(2)  --------->ANAC46     <---------ANAC58--------->MYB46(3) <---   tcaagtatttttgtacgagctatttttttttttgtttctctcttcggcactaacctaagtgtttgcttcttttgttgacagccactgagactcgaaatca  30091100                                                <---------LBD16                                               <---------LBD16                                           <---------YAB1                                      <---------ICU4                                      --------->YAB1                                     <---------ATHB12                                     <---------YAB1                   <----------DOF2                                 ------>ZmHOX2a(1)              --------->ANAC46             <----------DOF2    --------->TOE1(3)               --------->ANAC58             -------- ---------->DOF2                --------->TOE2(3)               --------->ANAC58   --------->At4g35610 ------TOE2(3)          >>>>>>>>>>GATA-1<---------YAB1 <---------ZAT14--------------------->WRI1 ----   aggtaatgcagtctcctttgatgctcgatttcatccttaatcattcttattcgggactgtattgacacgcttctttgttttgatcagcgtaagtttgctc  30091200  Previous    Next  AGI:  At1g79975.1    Description:  similar to Os01g0593600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043462.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ70708.1); contains InterPro domain SYS1 homologue (InterPro:IPR016973) Range:  from: 30089007    to: 30090494    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g79990.1    Description:  coatomer protein complex, subunit beta 2 (beta prime), putative. Identical to Coatomer subunit beta'-1 [Arabidopsis Thaliana] (GB:Q9CAA0;GB:Q9SSD5); similar to coatomer protein complex, subunit beta 2 (beta prime), putative [Arabidopsis thaliana] (TAIR:AT3G15980.2); similar to coatomer protein complex, subunit beta 2 (beta prime), putative [Arabidopsis thaliana] (TAIR:AT3G15980.3); similar to coatomer protein complex, subunit beta 2 (beta prime), putative [Arabidopsis thaliana] (TAIR:AT1G52360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45935.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN59846.1); similar to Range:  from: 30090676    to: 30097131    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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