Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                         --------->AHL20(2)                                 --------->WRKY38(1)                                    <---------AHL20(2)                                 --------->WRKY12                                <---------ZAT6  ----                      <---------ICU4     --------->AHL20(2)                      ----------->GT1<----        --------->ETT(2)       --------->REM1(2)        ---------->ID1       ---------->DOF2<--------        <---------ETT(2)--------->At4g35610            <-----------GT1--------->ATHB12  --------->AHL20(2) --------ATHB12       --------->YAB1     <---------AHL20(2)    <-----------GT1--------->DAG2<--------   aatcaatatgtagacataatgtaatcagcactgtgttgactgtttaattcttgtttttttcgttttatctggtcattgcaaaagtgttaattaatatatt  30086600                                         <---------AHL20(2)                                         --------->AHL20(2)      <---------RVE1(1)                  --------->ATHB51     <---------GLK1(2)                   <---------ICU4     <---------ARR11(3)                 <---------YAB1     --------->ARR11(3)               --------->YAB1 ------ICU4                           <---------ICU4                                           <----- -ARR11(3)                           --------->ICU4                                           <------ >ARR11(3)                           <---------YAB1                                           <------ >AHL20(2)                         --------->YAB1                                           <-------- >AHL20(1)                     <----------DOF2                                            <---------AHL20(2) ----->YAB1              <---------ARR11(3)        --------->ANAC58                      --------->ICU4 ---TEIL                 --------->ARR11(3)  <---------AHL20(2)                          --------->AHL20(2) -AHL20(2)      <---------ARR14(2)<---------YAB1   --------->ANAC58            --------->AHL20(2) -AHL20(1)<XXXXXXXXXXXXXXXXXXXXMIR862-3P--------->ICU4    --------->YAB1       <---------AHL20(2)   cattacagatttttagtggatttagtatatattcttttgataattattttcttacgcctataatcacatacaatgtctcatataatttgtatttattatt  30086700   --------->DAG2  ---------->DOF2 ----YAB1             ----------->GT1              <-----------RAV1(1)     --------->MYB46(3) ---AHL20(1) <---------AHL20(2)                  <----------DOF2        <---------WRKY38(1) ---AHL20(2) --------->AHL20(2)        ---------->DOF2             --------->ZAT14               <--- -YAB1   <---------YAB1  --------->AHL20(2) ---------->DOF2    <-----------GT1           <----------DOF2   tttaaaaagttctgataaattggagaataaaaaacaagagttaaagcaaagctttgttgttgttttttctgtagtcaacaaatattgttctcttttttta  30086800                                                                      <---------MYB52(1)                                                                     --------->LBD16                                                                <---------ANAC58                                                             <<<<<<<<<MYB2                                        <----------ARF1    <---------ANAC58                                 <---------YAB1            <---------ANAC58        --------->YAB1      <---------ANAC55(2)         <---------DEAR3(1)                         <-   --------->AHL20(2)       --------->ANAC55(2) <------ZmHOX2a(2)  <---------LBD16          <-------- ------TOE2(3)  ---------->DOF2  --------->ICU4<-----------HVH21<---------ANAC58         <-----------GT1   agaaaaaaaatgaaaatgaaaagacttgataagtgataatgggagacacgatcactcgtaggcgttgcttccggtttttatttctaacatttttctactc  30086900                                                                                         --------->ARR14(2)                             --------->AHL20(2)                                          <---------ARR14(2)                            --------->AHL20(2)                                           <---------GLK1(2)                            <---------AHL20(2)                         *TSS      <---------------AtSPL3                      ----------->GT1                                ------------>CBF <---------ANAC55(2)                     --------->HSFB2a(2)        <------ZmHOX2a(1)   --------->ANAC58  --------->ANAC55(2)                     <---------HSFB2a(2)       ----------->GT1      --------->ANAC58 ------->TEIL ---------DOF2<-----------------AGL1   <---------YAB1          --------->ANAC58  <---------------AtSPL8 ---GT1       <-----------------AG    <-----------TBP          --------->ANAC58 <---------ANAC46 <---   tcttttttttttttttttctcttatggaaaataattttgtttttataagaggaaaatacagaggcaaggcaaacaatacgagtcttgtacgtattctctc  30087000                                                ------>MYB46(1)                                                ------>MYB83                                               --------->ANAC58                                               --------->ANAC58                                               --------->ANAC46                                           <---------ALFIN1                                           --------->AtMYB61                                          --------->MYB46(3)                                      --------->ANAC58                                      --------->ANAC58                                      --------->ANAC46                                     --------->ZAT18                             --------->YAB1--------->DEAR3(1)                            <---------ATHB12  <---------MYB55(2)                          --------->WOX13(1)  --------->MYB46(3)                <---------ATHB12   --------->ZAT14                                       >>>>>>>>>TBF1      ------>ZmHOX2a(1) <---------ATHB12 ------->TEIL                           ------>NtERF2     --------->TOE2(3)--------->WOX13(1)--------->ANAC46                       <----------ID1 <---------ANAC58   <---------ATHB12 <---------ZAT18                      <---------DOF5.7(2) <---------ANAC58 --------->WOX13(1) --------->SPL7      <---------YAB1   --------->MYB52(1)        - -------DOF2  --------->WOX13(1)   <---------SPL7      --------->YAB1   --------->ARR11(3)     <-----   tttgcttcctaaaaatcaatcaatcaatcaatcacagagtacgcaccaccagccaaattataagtgagagagaagataacgacgacaagaagaagaagga  30087100                                                                                            <------NtERF2                                                                                           ------>NtERF2                                                                                           <---------RAP2.6(3)                                                                                          --------->ATERF1(2)                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                                                          <---------ATERF1(2)                                                                                          >>>>>>>>>AtERF-4                                                                                          --------->RAP2.6(2)                                                                                          --------->RAP2.3(2)                                                                                          --------->RAP2.3(3)                                                                                          >>>>>>>>>AtERF-7                                                                                          --------->RRTF1(2)                                                                                          >>>>>>>>>AtERF-5                                                                                          >>>>>>>>>AtERF-3                                                                                          >>>>>>>>>>AtTINY2                                                                                          >>>>>>>>>AtERF-2                                                                                          --------->DEAR3(1)                                                                                          --------->RRTF1(3)                                                                                          >>>>>>>>>AtERF-1                                                                           ----------->GT1--------->ANAC46                                                                          <---------HSFB2a(2)       -                                                              --------->GLK1(1)          --------->ERF1                                                           ------>NtERF2  --------->HSFB2a(2)<-------                                                          <---------RAP2.3(3)            --------->RRTF1(1)                                                    <----------DOF2      <---------LBD16 --------->RAP2.3(1)                                                ------->PIF5  <----------DOF2            --------->ATERF1(1)                                               ----------->RAV1(2)    <---------CCA1(2) <---------At4g35610                                               --------->At4g35610 ------>ZmHOX2a(1)    <---------ATERF1(1) -------->At4g35610              ----------->GT1<-------PIF5 <---------ANAC58           --------->At4g35610 -ZmHOX2a(1)        <---------AtLEC2         <---------ALFIN1<---------ANAC58    ---------->DOF2<----   gaagctccaaaattgttcatttgcatttctccaacttgtaaaatcgagcacctgcatttgggggctttcctcttatctggaaacaaagagagccgccact  30087200           <----------DOF2          <---------ANAC58                       <<<<<<<<<TBF1             --------->GLK1(2) --------->At5g28300------>ZmHOX2a(1)         <<<<<<<<<TBF1       <----------DOF2 ---------->GT1    --------->TOE1(3)       <<<<<<<<<TBF1          <---------DAG2 --ALFIN1 <---------ANAC58              <<<<<<<<<TBF1       --------->AtMYB61            --------->YAB1 -----ATHB12       --------->TOE2(3) <<<<<<<<<TBF1          --------->ZAT6<---------GLK1(2)   gatggtaaatttgcttttcatccttaacctctctacttcttcttcttcttcttcttctactaccactactttttgagattctatctatctatagtcatcc  30087300                                        --------->ARR14(1)                                        --------->GLK1(2)                                       <---------ARR11(3)                        <-----------GT1<---------GLK1(2)                     <---------AHL20(2)<---------ARR14(2)                                 <---------ARR11(3)                   <---------AHL20(2)  --------->ARR14(2)                                 <---------ARR14(2)             <----------DOF2           --------->ARR11(3)                                 --------->ARR14(2)        <------ZmHOX2a(1)    --------->ATHB12                                             --------->ARR11(3)   attttgactaggagactttatattattttcttcatttgaaagattctctatacatagatagtcatcgattgtgtttctgtgtgtgtctgcaatatctgta  30087400                              -------->P    --------->MYB52(2)                              ------>MYB46(1)                  --------->ATHB12                  <---               ----------->RAV1(2)      --------->MYB59       --------->ICU4                   ------               <---------ANAC46 --------->YAB1         <------ZmHOX2a(2)                   --------->ATHB12               <---------ANAC58<---------ATHB12       <---------AGP1                     <---------WOX13(1)  --------->ATHB12            ------>MYB83<---------MYB52(1)  <---------YAB1      <-----------RAV1(1) <---------YAB1<---------ANAC58--------->MYB46(3)<---------ANAC46             <---------YAB1 <-------   gttttgatttgaaacttgcctgaatcaaatccaaccatgaattcggtagttttgtagatcagagattattggtagagagtatcaatgttggattgattga  30087500  Previous    Next  AGI:  At1g79970.1    Description:  similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT2G25690.2); similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT2G25690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44134.1) Range:  from: 30086971    to: 30088787    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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