Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------WOX13(1)                                         <---------AHL20(2)                  --------->YAB1                                         --------->AHL20(2)                  <---------ICU4                                        <---------AHL20(1)                  --------->ICU4                                        <---------AHL20(2)                --------->YAB1                                        --------->AHL20(1)            ----------->GT1 -------->ZAT6                          --------->AHL20(2)        <---------AHL20(2)           ------ ----ANAC58                          <---------AHL20(2)          --------->AHL20(2)     <---------WOX13(1) ----ANAC58 --------->DAG2          --------->AHL20(2)        --------->ATHB12  --------->MYB52(1) --DOF2    ---------->DOF2          <---------AHL20(2)       <---------YAB1 <---------YAB1 <---------TOE2(3)   ttacagtagataaaaaagtattggtaaccatgctcttataaatttaattgaattagacagtttatgattaaatcgataataataacgaagattgatgtat  30074000                                                                        <---------AHL20(2)                                                                     <---------AHL20(2)                                                                    --------->AHL20(2)                                                                  --------->TOE2(3)               <---------AHL20(2)                                <---------ICU4              --------->AHL20(2)                                 --------->YAB1              --------->AHL20(1)          --------->REM1(1)      --------->ATHB12              <---------AHL20(2)     ----------->GT1            <---------ATHB12 <---------AtLEC2               --------->AHL20(2)              --------->ICU4       --------->AHL20(2) ->TEIL       <---------AHL20(1)<---------AHL20(2)       --------->TOE2(3)           <---------AHL20(2)   tttgcaagtagaacaatttatttctggtcgaaatataaatagttacaacaaaacagttttcttaaaatcattaaatatttgttttgtttaaatctctatt  30074100                                      --------->HSFB2a(2)                                  <---------AHL20(2)                                      <---------HSFB2a(2)                                 --------->AHL20(2)                                      <---------HSFC1(1)                            <------ZmHOX2a(2)                                      --------->HSFC1(1)                       <---------LBD16                               <---------AHL20(2)                            --------->ARR14(2)                              --------->AHL20(2)                       --------->YAB1   --------->TOE2(3)           <-----------GT1  --------->TOE2(3)             ---------->ID1     <---------ARR11(3)    <-----------GT1     <------ZmHOX2a(2)               <---------MYB46(3)   --------->ARR11(3) <---------REM1(1)     <---------ARR11(3)<<<<<<<ZML2    <-----------RAV1(1)  <---------ARR14(2)   ttgttgtaactatttacaatctctagatcacattaaatctctagaacatataagagatttgttgcaatccctattacaatatctggatcacattaaatct  30074200                                         <-----------GT1                              ------>ZmHOX2a(1)                              <----------DOF2                            <------------------------ANAC81                          <---------ARR11(3)                                                ---------                          <---------ARR14(2)                                             <---------ANAC58                          --------->ARR14(2)                                      <-------TEIL                         <---------CCA1(2)  <----------DOF2          <---------AHL20(2)  <---------ANAC58                      ===============HOX2a_HOX2a    --------->AHL20(2)         <---------GLK1(1)                      ------>ZmHOX2a(2)  ---------->ID1       ----------->GT1  <---------HSFB2a(1)                <----------DOF2      <----------DOF2<---------AHL20(2)         --------->GLK1(1)   ctagagcatataatccctctttgatccatatccttttctctttttcctttctaatttataaaaaatgtgattttttttgggaaattcgttttcgttcacc  30074300                             --------->AHL20(2)                             <---------AHL20(2)                    <-----------GT1                 <---------ICU4                 -------->HAHB4                 <--------ATHB1                 <--------HAHB4                                                                   ---                 --------->YAB1                                                         <---------AHL20(2)                 --------->ATHB51        --------->AHL20(2)                             <---------YAB1                --------->ICU4          <---------AHL20(2)                             <---------AHL20(2)                <---------YAB1<---------AHL20(2)                                       --------->AHL20(2)                --------->AHL20(2)      --------->AHL20(2)                          <---------AHL20(1)                <---------ATHB51  ----------->GT1           ---------->DOF2         --------->AHL20(2)              --------->YAB1 <---------AHL20(1)          ----------->GT1            --------->AHL20(1) >WRKY38(1) <---------YAB1   --------->AHL20(1)  ----------->GT1          <------------CBF<----------   ataaaaactttgctattaataattactctaatttaatggaaaataaataactcgtaaaaatgtaaagagagaaatgaattgcgaaatattttaattgaga  30074400                                                 --------->GLK1(1)                                            <---------ATHB12                    --------->ANAC58       ------>MYB46(1)                    --------->ANAC58       *TSS  <---------GLK1(1)                --------->ANAC58           ------>MYB83        ----------->GT1                   --------->WOX13(1)       --------->DAG2         ---------->DOF2--------->YAB1 ---------->DOF2--------->ANAC58  --------->ARR11(3)                            ----------->GT1 -------->GT1   --------->ANAC46  <---------ARR11(3)--------->YAB1            ---------->DOF2     --- --CBF---------->DOF2  ---------->DOF2  ------------>CBF                   --------->YAB1        ----   aggtaaagaaaagtgaataagcaagtaaagaagaaagaactcaccaatcagaaatcagaaattagaagagaagagaagcataaagaaaaaaaaactgcaa  30074500                             ------>ZmHOX2a(2)                             ==================================HOX2a_HOX2a                   --------->At4g35610                   <---------At4g35610                   <---------ZAT2              ------>ZmHOX2a(2)             <------ZmHOX2a(2)            <---------ARR14(2)                                 <---------At4g35610            --------->ARR14(2)                                 --------->At4g35610     <-------GAMYB --------->ZAT2                             <XXXXXXXXXXXXXXXXXXXXXMIR2933A/B  <----    --------->MYB52(2)      <------ZmHOX2a(2)            <---------TOE1(2)                  <--------    --------->MYB55(2)      ===================================HOX2a_HOX2a                  ---------    <---------MYB46(3)     <---------ARR11(3)            <---------TOE2(2)                  <--------    <-----------RAV1(1) <---------ZAT18                 ------>ZmHOX2a(1)                   ---------  <---------MYB52(1)  --------->At4g35610              --------->TOE2(2)         ------>ZmHOX2a(1) ---->GAMYB<---------RAP2.6(3)    <---------YAB1     <---------YAB1         <---------GLK1(1)   ----- ----->DEAR3(1) --------->At4g35610  <---------YAB1--------->YAB1    <<<<<<<<<TBF1    --------->HSFB2a(2)   cgccgtttgttgccgatctgcagcagcgcgatctctctgattatagagagctatcatcctaggtgagcttcttcttcgatttcctcttctacaatatcct  30074600                                       <---------ANAC58                            --------->ATHB51                            <--------ATHB1                            --------->ATHB12                <---------MYB46(3)                            <---------ICU4                  --------->MYB52(2)                            -------->ATHB1                 <---------TOE1(2)                           <<<<<<<<<<AGL24                <---------MYB52(1)                           <<<<<<<<<<AGL22              <---------ANAC46                           --------->ICU4               <---------ANAC58 ------DOF2                <---------YAB1        <---------MYB52(1) -ARR11(3)                 <---------ATHB51      --------->LBD16                        ------>ZmHOX2a(2) >ARR11(3)                 <---------ATHB12     --------->ANAC46               <---------ANAC46 -ARR14(2)                 <<<<<<<<<<AGL20     <---------HSFB2a(2)       <---------TOE1(3) >ARR14(2)              ------------>ATHB5     --------->HSFB2a(2)       <---------TOE1(2)          < ->ZmHOX2a(1)     <----------DOF2      <---------ANAC58 <---------ANAC58 <---------TOE2(3) ----------   ttcaagttcgatttcatcttctttcaccaattattggttttgcttccttcccgtagtttcgtttgtttgttttctaaggttttgtgtcgatctcaaagtg  30074700                                                                                                    <                                                    <---------GLK1(1)                         -------                                                   --------->ARR11(3)                        --------                                       ------>ZmHOX2a(2)  <---------MYB52(1)          <---------ZAT18                                      <------ZmHOX2a(2)  <-----------TGA1           <---------At4g35610                                     --------->AGP1<---------ARR11(3)        <---------AHL20(2)<-----  --------->LBD16                    <---------ARR11(3)  <-----------HVH21  --------->AHL20(2)------- <---------LBD16           <---------GLK1(2)  <---------ZAT6                <---------AHL20(2)<------ ---------ZAT14  <----------DOF2     --------->ARR11(3) --------->ANAC46    <---------AHL20(1)------- >DOF2  <-------TEIL --------->ZAT6 --------->GLK1(1)------>ZmHOX2a(2)--------->TOE2(3)   <------NtERF2   agtccagggattcatatacctttagactagattagccgagatctattagtgttgatctccgtcatgtagaatccctaattaatttcagtggcctcagatc  30074800 <----------DOF2 ---------GLK1(2) -->AGP1 ->At4g35610                          xxxxxxxxxxxxxxxx>smallRNA(i)           --------->At4g35610 -ZmHOX2a(2)                        <---------DAG2                           <---------At4g35610 -->ARR11(3)                        <----------DOF2               <----------DOF2                  -- ---ARR14(2)            <---------CCA1(2)                         <---------DAG2      <---------GLK1(2) -->ARR14(2)  --------->YAB1--------->TOE2(3)            <---------YAB1 <----------DOF2--------->GLK1(2)   cagcttttcatgttattgataattttgtatccttgaagctttttggatgttgtgagattataacagagcttttcctttcagcagaatagaatctctcagt  30074900  Previous    Next  AGI:  At1g79940.1    Description:  heat shock protein binding / unfolded protein binding. similar to DNAJ heat shock N-terminal domain-containing protein / sec63 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G21180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49512.1); similar to unknown [Populus trichocarpa] (GB:ABK92488.1); similar to hypothetical protein OsI_014762 [Oryza sativa (indica cultivar-group)] (GB:EAY93529.1); contains InterPro domain Heat shock protein DnaJ; (InterPro:IPR003095); contains InterPro domain Sec63 (InterPro:IPR004179); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro d Range:  from: 30074443    to: 30078225    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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