Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------YAB1                                                        --------->ANAC55(2)                                                    <-----------HVH21                                              <---------AHL20(2)                                              --------->AHL20(1) --------ALFIN1           <-----------GT1     --------->AHL20(2) <---------AtLEC2 ------->RAV1(1)----------->GT1  <-----------GT1   ----------->GT1              --------->ICU4   aacacttgtgtccatccatggttatatataacaattaacaatttcaaataaaatggtcacatgttttgaatgaatgaatgagatgatggaattgaagtaa  30059400                              --------->ATHB12                       <---------WOX13(1)                                      ------->GAMYB                     -------->HAHB4                                            ----------->GT1                     --------->ATHB12     <---------YAB1                     <---------LBD16                     <--------ATHB1     <---------ICU4                      --------->MYB52(1)                     <---------ICU4     --------->YAB1            ---------->DOF2                    <---------YAB1     --------->ICU4========================bZIP_DOF   --------->YAB1                    --------->ICU4     <---------YAB1<---------TGA1a        <-----------GT1                  <---------ICU4   <-----------TGA1  ==================================MYC_MYB     --   accatatatatgagagaacataatgattgaattgattcgtcatcatcactgactcacttgcgaaataacaaagagttttaacggaaaaaataagaattga  30059500                                <---------LBD16                              <---------SPL7                             <---------ANAC58                     ------->GAMYB--------->LBD16              --------->At4g35610                    <---------ALFIN1      <---------ALFIN1     <---------At4g35610                 <---------WRKY38(1)  --------->GLK1(1)     <---------At5g28300   <-------TEIL           --------->TOE2(3) <---------ANAC58 --------------->AGL15     <---------ICU4  ------->TEIL      <---------MYB52(2)<---------DAG2<---------GLK1(1)    <-----------GT1        ------->TEIL ------->MYB52(1)<---------WRKY45<---------ANAC46       <---------ICU4 <---------ATHB12 <-------TEIL   ataccgaaacaaaccctagtcaacacccttatcgtgcgggaactccaccctgttttagtaattacagctctaaatcaatacatgtacatgtacgtagaga  30059600                                                                            ------>ZmHOX2a(2)                                                                           <------ZmHOX2a(2)                                                                           --------->GLK1(1)                                                                          <-----------ARR10                                                                          --------->AGP1                                                                          <---------AGP1                                                                          <---------ARR11(3)                                                                          --------->ARR14(2)                                                                          --------->ARR11(3)                                                                          <---------ARR14(2)                                                                         <---------CCA1(2)                    --------->DAG2                                <---------ARR14(2)            ----------->GT1 <----------ARF1            --------->CCA1(2) <---------At4g35610   ------           --------->ALFIN1 ----------->HVH21   <---------ANAC58  --------->ARR14(2)           ------  ---------->DOF2  ---------->DOF2              <---------ANAC58 <---------MYB52(1)            ------   gagagaaagagaggtggataaaaaagcggggagacagggttccatggttttcttgcgatacaagtccgtttcttcagatctcatgtaagaccgagccaag  30059700                                             ---------->DOF2                 *TSS                                           <---------YAB1        --------->DAG2  <-----------HVH21                        ----------->TBP      ---------->DOF2          <---------ALFIN1 --->ANAC58                             ------>ZmHOX2a(1)    --------->TOE1(3)        <------ZmHOX2a(1) --->ANAC58            <-----------GT1 --------->TOE2(3)     --------->TOE2(3)    ---------->DOF2 --->ANAC46    <----------DOF2------>ZmHOX2a(1)          <---------MYB52(1)<----------DOF2   ccaaggtcgcttctcttctttttcattacctcctctctcttccttataaaagcccttcccttaccttaaagcgccatctttctcaaaaggaccacatttc  30059800                                                                   ------------------------>ANAC81                                                                   ----------->RAV1(1)        >>>>>>>                         --------->ANAC58                         <----------ID1           >>>>>>>>>TBF1                         --------->ANAC58                       ------------------------>ANAC81  >>>>                         --------->ANAC46              --------->LBD16                   ------------              <----------DOF2 ---------->DOF2        --------->ANAC46               ---------->DOF2 >   ttctctctgtctctctctttctcttgcacgaagaaagagagagagataacaaaaccccccaaaaaaaaacaacaaaaaaaaaaaaaaaaagaagaagaag  30059900                                                                                 <--------P                                                                               ----------->GT1                                                                              <---------------AtSPL3 >>TBF1                          ----------->GT1                         --------->ANAC46           < >>>>>TBF1                      --------->DAG2                           --------->ANAC58           < ------------>ANAC81          ---------->DOF2                            --------->ANAC58        <--- >>>>>>>>TBF1      <---------MYB52(1)               <---------MYB46(3) <-----------GT1    <---------At4g35610   aagaagaagacaaccttgtctgtttttttttcgaaaggcaaaatgtttgatgggctgttcaaacccaagttttatacgaaatggtaagtctctgcttatt  30060000                                     <---------YAB1                                    <---------AHL20(2)                                    --------->AHL20(1)                                   --------->AHL20(2)                                   <---------AHL20(2)            <---------DOF5.7(2)                                   --------->YAB1                --------->MYB52(1)                               <---------AHL20(2)              <---------ARR11(3)                        <---------WOX13(1)                     --------->ARR11(3)        ------>ZmHOX2a(1)      --------->AHL20(2)         --------->WRKY18(1)        --------->LBD16<---------ANAC58                 <------MYB83  <---------MYB52(1)   <---------ANAC58                 <---------MYB46(3)                     <----- ---------ANAC58      --------->ATHB12                  <------MYB46(1)                --------->At5g28300 ---------ANAC58    <---------MYB52(1)              <---------MYB46(3)            <---------REM1(2) --------GT1      <---------MYB46(3)<---------AHL20(1)<---------MYB52(1)        ----------->ARR10----   ttccgttttcctggtttcattcgttgattgtttttaattatatttctcagcaagtcgttggtcaagataacgaagacaagagtagacacggtgaagagga  30060100                                         ------>ZmHOX2a(2)                                       --------->ARR14(2)                            --------->ANAC58                                                      <--                            --------->ANAC58                                          <---------YAB1                  <---------ARR11(3)   <---------ARR11(3)                      ----------->GT1    <--                  --------->ARR11(3)   <---------ARR14(2)                     <------NtERF2   <------ -ZmHOX2a(1)     --------->CCA1(1)     --------->ARR11(3)               ------->MYC3 <---------ARR11(3) ------->GT1     --------->RVE1(1)   --------->ETT(2)                   <-------MYC3 --------->ARR11(3)   agaaaaactcggtttgcaaatatctcaagaacgacattgtcgatcttctcaagaacagcctcgattacaatgcatatggcagggtaatatcattttcttt  30060200                                                                                =====================                                                                                =====================                                                                                ------>ZmHOX2a(1)                                                                       <---------YAB1                                                                    <---------MYB52(1)                                                                  --------->ANAC58                                                                  --------->bZIP60(2)                   <-------MYC3                                   --------->ANAC58       <---------ICU4    <---------At4g35610                      ----------->GT1                   -      --------->AHL20(2) <------NtERF2 <----------DOF2            --------->ANAC55(1)               < -------At5g28300  ------->MYC3    <---------ANAC58               --------->ANAC46                  - ---------GT1  <-------TEIL        <---------ANAC58               --------->ANAC55(2)              <- ----DOF2     --------->AtLEC2     <---------ANAC46               <---------ANAC55(2)           -----   tacccccatttattacatgcatatggcagcctctattgcgtcttttttgtttgtttggagttatagacacgttattcatgtcctctatcgacttaatgaa  30060300  Previous    Next  AGI:  At1g79910.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G52315.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45916.1); contains InterPro domain Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061) Range:  from: 30059777    to: 30062063    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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