Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <-------PIF5                                                                                            ------->PIF5                                                                                           <---------ANAC58                                                                                           <---------bZIP60(2)                                                                                           <---------ANAC58                                                                                           --------->O2                                                                                           <---------TGA1a                                                                                           --------->TGA1a                                                                               <---------HSFB2a(2)                                                                         <----------DOF2   <---------ANAC46             ----------->GT1                                             ============================bZIP_DOF         ---------->DOF2                                                 --------------->AGL15      --------------->AGL15                                             --------------->AGL15      ==================================================================================MADS_MADS      ====================================================================================MADS_MADS      <---------------AGL15                                             <-----------------AGL1   <---    ------------>CBF                                                    <---------------AGL15-------- ------->LBD16                                                          <-----------------AGL2  <---- ------>RAP2.6(2)                                                   <---------ANAC58       <---------O2 ------>RAP2.3(2)                                                   <---------ANAC58    ----------->HVH21 ------>ANAC58                                                 <----------DOF2 --------->HSFB2a(2)<-- ------>ANAC58         <---------At5g28300              <----------DOF2 <-----------------AGL3  <---- ------>RAP2.3(3)  <---------ICU4                       =============================================bZIP_DOF ------>RRTF1(2)  --------->ICU4              <------------CBF ======================================bZIP_DOF ----->RAP2.3(1) <------------CBF    <----------DOF2  <---------At4g35610<---------------AGL15 <-----   ccgcaaaacaataaagggtaattgttacagtgattttggctttgagaaaattgtggagctttcttcttttgcttcctttttttggaagatgggacgtggg  30049200                                              --------->ARR11(3)                                      --------->AHL20(2)                                      --------->ATHB51                                     --------->ICU4                                     <---------YAB1 <---------TOE1(2)                 <---------ICU4 <---------TOE2(2)                 --------->YAB1 ------ZAT18                       <--------HAHB4                                         --------->AHL20(2) ->ALFIN1                --------->YAB1      <------ZmHOX2a(1)     <---------ZAT6      --------->AHL20(2) -----PCF2  --------->AtMYB61     <---------ATHB12           <---------ICU4            --------->YAB1 -------ANAC46<---------ALFIN1    <---------YAB1            --------->ICU4        --------->AHL20(2) -----ANAC46<---------ALFIN1<-----------GT1<---------TOE2(3)<---------YAB1    <---------ANAC46      - ----DEAR3(1) --------->ANAC46    --------->ICU4          --------->YAB1      ----------->GT1      <-   gcgcatgtttcagaccacacctcttaattttaactaatcattatttaggattttgaacattgataattagagatagagagccgtttaaattataaaatgt  30049300                                                                            --------->At4g35610                                                                         <---------At4g35610                                                       --------->AtLEC2 ---------->TaMYB80                                                       --------->ANAC58 <---------ARR14(2)                                                       --------->ANAC46 --------->GLK1(2)                                               ----------------->AG     --------->ARR14(2)                                            --------->GLK1(1)          --------->GLK1(1)                                            <---------GLK1(1)      ------->GAMYB         >>>>>>>>>MYB98                    --------->ARR14(2)  <---------WRKY38(1)     ----------->GT1                       <---------ARR14(2)  <---------WRKY12 -------->YAB1        <---------YAB1       <---------GLK1(2) <-----------HVH21                 <----- --------YAB1       ----------->GT1<-----------HVH21   --------->ANAC58<---------GLK1(1)--------->AtLEC2   tatcatatagtaacatactaaaatgtgattacacccttgtcactggattccctaaacatgcaatgtcaacggggaatctgctacgtttccatacacatac  30049400                                                                  <-------MYC3                                                                  ------->MYC2                                                                  <-------MYC2                                                          --------->YAB1                                                         <---------YAB1                        <-----                                     ------>ZmHOX2a(1)  --------->ARR11(3)                     ------                                 ------->TEIL    <---------AtLEC2 ------->MYC3                <------  ------->TEIL             <-------TEIL--------->REM1(1)<---------ARR11(3)     <----------DOF2------- --TEIL               --------->YAB1--------->TOE1(2) ------->TEIL--------->TOE1(2)  --------->YAB1<-   agtgtatgtcttcttgtgtttgtatcatgttcatgaatcctacaacaatttgcatgaatatcatcaaacgtgcaatgttgtctttaaacataagtcatga  30049500                                                                       ----------------->AGL3                                                                --------->YAB1                                                                --------->ATHB51                                                                <------------ATHB5                                                                <---------ICU4                                                                --------->ATHB12                                                               <---------ATHB51                     - ----ICU4                                                      <---------ATHB12                     - --->ATHB12                                        ----------->GT1   <---------PCF2                 - ---YAB1                   <-----------HVH21   --------->DAG2  --------->ICU4                      -- -->ICU4    <------ZmHOX2a(1)                 ---------->DOF2--------->WOX13(1)               ------- --------LBD16        ---------->DOF2      ----------->TBP ------------>CBF             <----------DOF2   tttcggaaccaagaggaaaacttgaaaagggtcatttagtggcccataaaaagcggataatatcaattatgggcccaaaaataggcccatctttatcgtc  30049600                                                                                  --------->CCA1(2)                                                   >>>>>>>>>>GT-3b               <---------ARR14(2)                                            <---------HSFB2a(2)                  --------->ARR14(2)                                       *TSS --------->HSFB2a(2)                  --------->ARR11(3)                                      <---------ICU4                             <---------ARR11(3)       --------->AHL20(2)             --------->ATHB12               ----------->GT1 ------>GAMYB                         <--------HAHB4              --------->MYB52(1) -------->TOE2(2)                     --------->YAB1          ------------------------>ANAC81 -------->TOE1(2)                    <---------ATHB12   --------->AHL20(2)     ----------->ARR10 ------->MYB46(3)--------->ANAC46  --------->WOX13(1)  --------->AHL20(2) ---------->DOF2  --------->WOX13(1) -->TOE2(3)--------->AHL20(2)    ------------>CBF ------------------------>ANAC81--------->ARR11(1)   aacctccgataaattatacacagacctctcactgactcaatcatttgcagaagaaaaataaaaaaaaaaaacagagaaaaggagatatggaatcaatcgg  30049700                          -------->P                                                              ---                          ------>MYB83                                                            ---               <---------ALFIN1--------->HSFB2a(2)                                    --------->GLK1(1)           --------->ZAT18------>MYB46(1)                                             <---------GLK1(1)        <---------bZIP60(2)    <---------HSFB2a(2)                               --------->LBD16  <--     <---------YAB1      ------>ZmHOX2a(1)                                     <---------LBD16    <--  ------>ZmHOX2a(1)     <---------MYB111(2)                           --------->HSFB2a(2)         ---  --------->ICU4      ------>ZmHOX2a(1)                               <---------HSFB2a(2)      ------   agtccttatgatgtgccccatgtcctcctacctcgagaacgagcttgagaagcgcttcaaccttcttcgcttctggacttctccggagaaatccgtcctc  30049800                                                     --------->DEAR3(1)                                                    --------->ATERF1(1)                                                    <------NtERF2                                                    --------->RAP2.3(1)                                                   <---------RAP2.3(1)                                                   <---------ATERF1(1)                                                   ------>NtERF2                                                  <---------DEAR3(1)                                                  --------->DEAR3(1)                                                  --------->RAP2.3(2)                                                 --------->DEAR4(2)                                                 --------->ERF1                                                 --------->RAP2.6(1)                                                 <---------ABI4(2)                             <---------MYB46(3)  --------->RAP2.3(1)                            <------NtERF2        --------->ATERF1(1)                           <-----------HVH21     <------NtERF2                          --------->RAP2.3(3)   <---------DEAR4(2)                          --------->DEAR3(1)    <---------ERF1                          --------->RAP2.3(2)   ------>NtERF2 <---------ZAT2                          --------->RRTF1(3)    <---------ATERF1(1)                         <------NtERF2          <---------RAP2.3(1)                         --------->ATERF1(1)    <---------ORA47(2)                         --------->ERF1         --------->LBD16                         --------->DEAR4(2)     <---------RRTF1(1)                         --------->RAP2.3(1)   <---------DREB2C(2)                  --------->TOE2(3)             --------->GLK1(1)                 <---------RAP2.3(3)                ------>MYB46(1)             <---------GLK1(1)                 --------->ATERF1(2)         ------>ZmHOX2a(2)            --------->ARR14(2) <---------MYB52(1)--------->RRTF1(1)       <------ZmHOX2a(2)        --------->At4g35610------>NtERF2       <---------RAP2.3(2)        <---------At4g35610 <---------GLK1(2)       --------->RRTF1(1)    <---------ATERF1(2)        --------->At4g35610 ------>HSFC1(1)        ------>NtERF2          --------->DEAR3(1)        <---------ARR14(2) --->ZmHOX2a(1)         <---------ATERF1(1)    <---------DEAR3(1)        --------->ARR14(2)         < -------HSFB2a(2)      --------->ANAC46       <---------LBD16 --------->At4g35610 ------>MYB83      - -------HSFC1(1)       <---------DEAR3(1) --------->At4g35610 <---------At4g35610 -------->P        - ------>HSFB2a(2)     --------->LBD16     <---------At4g35610 --------->ZAT2     <---------ALFIN1   < >ZmHOX2a(1)<---------ARR14(2)<-------GAMYB <-----------RAV1(1)       --------->At4g35610      <-----   ctagaaactcatcggaactccatccgcgccgtcgttgggaatgcttctgccggcgccgatgctcagctcatcagcgatctgcccaaccttgagattgtat  30049900                                                                     --------->ANAC58                                                                    ------->GAMYB                                                                    =================================MYC_MYB                                                                   <---------ALFIN1                                                                   --------->AtMYB61                <                                                                   --------->MYB46(3)               =                                                                  ===================================MYC_MYB                                                                  ------>MYB46(1)                   =                                                                  -------->P                       --                                                                  ------>MYB83                     --                                                                  XXXXXXXXXXXXXXXXXXXX>MIR782      <-                                                           <-----------TGA1                        <-                                                           <-----------HVH21                       <-                                                          --------->ANAC46                         <-                                                          --------->bZIP60(2)                      --                                                          --------->O2    <---------ALFIN1         <-                                                       ------>ZmHOX2a(2)  ------>NtERF2           <--         --------->ALFIN1             --------->AtLEC2 <---------LBD16--------->DEAR3(1)    <--------        <-----------HVH21           --------->GLK1(1) <------ZmHOX2a(2)  --------->DEAR3(1)<---------TGA1a      <---------At4g35610          <---------ARR14(2)--------->ARR14(2)  --------->ANAC46  <---------bZIP60(2) ---------At4g35610                --------->ARR14(2)<---------ARR14(2)--------->ANAC46    <---------O2 -------->At4g35610            <---------LBD16      <---------GLK1(1)--------->ANAC58      --------->TGA1a -------->ZAT2          <------ZmHOX2a(2)       --------->DAG2  --------->AtMYB61          --------->O2 ---------ZAT2         <---------ARR11(3)      ---------->DOF2 --------->MYB46(3)    --------->DEAR3(1) ----ARR14(2)          --------->ARR11(3)---------->DOF2 --------->LBD16 ----------->HVH21 --------->ANAC46   ccagcttcagcgtcgggctcgacaagatcgatttggggaaatgcaaagaaaaagggatccgcgtcaccaacacccccgacgttctcaccgaagacgtcgc  30050000   --------->ANAC46   --------->ANAC58   --------->ANAC58 ===================================HOX2a_HOX2a ==========================HOX2a_HOX2a              ------>ZmHOX2a(2) ------>ZmHOX2a(2)                          <---------ANAC58 ------ZmHOX2a(2)                           <---------ANAC58 ==========================HOX2a_HOX2a  --------->ALFIN1 ===================================HOX2a_HOX2a--------->ZAT18 ------->ARR11(3)                   <---------At4g35610 ------->ARR14(3)                   --------->At4g35610 ----------ARR10                   ------>NtERF2   ===================HOX2a_HOX2a --------ARR14(2)                 <---------DEAR3(1)==================HOX2a_HOX2a --------ARR14(3)              ----------->HVH21   <------ZmHOX2a(2) --------AGP1<---------ANAC58==============================HOX2a_HOX2a       --------->ANAC58 ------->ARR14(2)            =============================HOX2a_HOX2a        --------->ANAC58 --------ARR11(3)   ------>ZmHOX2a(1)   <---------ANAC46          ----------->GT1              ------ -------CCA1(2)   ----------->RAV1(2)<---------DEAR3(1)          --------->At4g35610   --------->GLK1(1) ---HVH21    <---------ANAC58------>ZmHOX2a(1) <---------ZAT18 <------ZmHOX2a(1)  ----------->GT1   agatctcgccatcgggcttatcctggctctccttcgacggctgtgtgagtgcgatcgctatgtaaggagcggaaaatggaagcaaggtgaattccaactc  30050100  Previous    Next  AGI:  At1g79870.1    Description:  oxidoreductase family protein. similar to oxidoreductase family protein [Arabidopsis thaliana] (TAIR:AT1G12550.1); similar to hydroxyphenylpyruvate reductase (HPPR) [Solenostemon scutellarioides] (GB:CAD47810.2); contains InterPro domain D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; (InterPro:IPR006140); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; (InterPro:IPR006139) Range:  from: 30049639    to: 30050920    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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