Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------HSFB2a(2)                                                                           --------->ZAT2                                                                         --------->MYB46(3)               ---------->DOF2          <----------DOF2       --------->At4g35610               <----         <---------ANAC58        --------->ARR14(2)           <---------At4g35610               -----         <---------ANAC58        <---------ARR14(2) --------->LBD16    ----------->RAV1(1)      -----         <---------ANAC46       <------ZmHOX2a(1) <---------LBD16   --------->ANAC46       <---------      <---------WOX13(1)  <---------ZAT14       <---------ALFIN1    --------->ANAC58   <---------ZAT18    --------->ATHB12      <---------At4g35610  --------->MYB46(3)   --------->ANAC58   --------->ZAT18   <---------YAB1         --------->At4g35610 ------>NtERF2   ------>ZmHOX2a(1) --------->HSFB2a(2)--   ggtttgtgattgcgtttgaaagggcgagagcagaggatactcctttgcctccaccggaattgtcctctcccagcaacagcttggagaagcgctctttcat  30048700                                                     <---------ANAC46                                                    <------NtERF2                                                   <---------ATERF1(1)                                                   <---------ORA47(2)                                                   <---------RAP2.3(1)                                                   <---------DEAR4(2)                                                   <---------ERF1                                                   ------>NtERF2                                                  <---------RAP2.6(2)                                                  <---------DEAR3(1)                                                  <---------RAP2.3(2)                                                  <---------RAP2.3(3)                                                 --------->ATERF1(1)                                               <---------DEAR3(1)                                              --------->ATERF1(1)                                            <---------ANAC46                                           <------NtERF2                                           --------->ATERF1(1)                 ------>ZmHOX2a(2)                                          <---------ATERF1(1)                  ======================                                          <---------ORA47(2)                  =======================                                          ------>NtERF2                       <------ZmHOX2a(2)                                          <---------ERF1 <------ZmHOX2a(1)   --------->ARR11(3)                                          <---------DEAR4(2)                 --------->ARR14(2)                                          <---------RAP2.3(1)                <---------ARR11(3)                                         --------->ATERF1(2)                 <---------ARR14(2)                                         <---------ANAC46=============================HOX2a_HOX2a                                         <---------DEAR3(1)              ------>NtERF2                                         <---------RAP2.3(2)             --------->At4g35610                                         <---------RAP2.3(3)             <---------At4g35610                                         <---------RAP2.6(2)             <---------ZAT2                                        --------->ATERF1(1)           --------->At4g35610    --------                       <----------DOF2  <---------ABI4(1)============================HOX2a_HOX2a              ---------->DOF2          <---------bZIP60(2)            --------->LBD16        -------- -----At4g35610  <---------At4g35610   <---------ATERF1(1)            <---------At4g35610    <------- ---->At4g35610  --------->At4g35610----------->HVH21--------->DEAR3(1) --------->DEAR3(1)  <-------- ------>RAV1(2)  --------->ZAT2 <---------ANAC58 <---------ABI4(1)   --------->ANAC46      <---------ZAT18 -DOF2--------->ARR14(2)        <---------ANAC58<---------ATERF1(1) <---------LBD16---------->DOF2 ------->At4g35610  ------>NtERF2  <-----------HVH21--------->ATERF1(1)--------->ERF1  --------->ALFIN1   ctgctccatgtctgccaaaagctgcctttctctagcctgtgaggcggcgagggcggcgaggactgcttcatccgcagccgatcttgaaagtggtggaccc  30048800                                             --------->ATERF1(1)                                            ------>NtERF2                                           --------->ALFIN1                                          <---------MYB52(1)                             <-----------TGA1<------NtERF2                    <---------ATHB12   <---------LBD16                 <---------WRKY12     <------ZmHOX2a(2)    <------ZmHOX2a(1)<---------MYB46(3)------>ZmHOX2a(2) ==========HOX2a_HOX2a       <-----------HVH21        --------->At4g35610 ==========HOX2a_HOX2a     <---------At4g35610  --------->At4g35610           --------->GLK1(2) ->TCP16(1)      <---------WRKY38(1) <---------ARR14(2)                 <----------CDC5 ->PCF5         --------->WRKY18(1)  --------->ARR14(2)                <---------At4g35610 --ARR14(2)<---------ICU4  --------->At4g35610  <------NtERF2          --------->At4g35610       ---- -TCP16(2) --------->YAB1---------->CDC5 --------->LBD16          <---------HSFB2a(2)     <---------ANAC46   tgactaggatgaataatggtcaatggttcagcgtcatgggatccggtggcagcctcatctaaaccggtctcgacgctgagactcttgttgtgtctcgtag  30048900                                                        ------>ZmHOX2a(1)                                                      <---------ANAC58               ------>ZmHOX2a(1)                                                      <---------ANAC58        --------->MYB46(3)          <-------GAMYB                      ------>ZmHOX2a(1)               ------->TEIL   <-----------RAV1(1)                  <---------ZAT2<---------ANAC46    --------->ANAC58  <---------YAB1  ------>ZmHOX2a(1)     <---------At4g35610               --------->ANAC58 ----->ZAT6<---------MYB52(1)          <---------ATERF1(1)          --------->LBD16  --------->LBD16   cactattgttgtcgttgttcctccatttgaaattgaagagcctgctcctataggtttcctgttcttgttccgaagcacgaaccattcctggtctcttgat  30049000                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                        <------ZmHOX2a(2)                  --------->DAG2         ---                            ---------->DOF2                            --------->YAB1             ---                 <------ZmHOX2a(1)    <------ZmHOX2a(1)              --------->GLK1(2)--------->GLK1(2)                 ==============================HOX2a_HOX2a          *TSS ---------->DOF2         ----               ------------------------>ANAC81               --------->ALFIN1     <------ZmHOX2a(1)--   ggcaatagagaattagagaggagagagagagaaagagagaggatcaaatgggcctctcttgagatggggagaatcaaaagggaaggagaagctaatcgag  30049100                                                                                            ------->PIF5                                                                                            <-------PIF5                                                                                           <---------ANAC46                                                                                           <---------bZIP60(2)                                                                                           <---------TGA1a                                                                                           <---------ANAC58                                                                                           --------->TGA1a                                                                                           <---------ANAC58                                                                               <---------HSFB2a(2)                                                                         <---------------AGL15             ----------->GT1                                             <----------DOF2   --------->O2         ---------->DOF2                                                 --------------->AGL15      ====================================================================================MADS_MADS      ==================================================================================MADS_MADS      <---------------AGL15                                             --------------->AGL15    <---      --------------->AGL15                                             <---------------AGL15--------    ------------>CBF                                                    <-----------------AGL1  <---- ------>RAP2.3(3)                                                       <-----------------AGL3  <---- ------>RRTF1(2)                                                    <---------ANAC58       <---------O2 ------>ANAC58                                                      <---------ANAC58    ----------->HVH21 ------>ANAC58                                                 <----------DOF2 --------->HSFB2a(2)<-- ------>RAP2.3(2)      <---------At5g28300              =============================================bZIP_DOF ------>RAP2.6(2)  <---------ICU4                       <----------DOF2 <-----------------AGL2 <----- ----->RAP2.3(1)  --------->ICU4              <------------CBF ======================================bZIP_DOF ------->LBD16   <------------CBF    <----------DOF2  <---------At4g35610============================bZIP_DOF   ccgcaaaacaataaagggtaattgttacagtgattttggctttgagaaaattgtggagctttcttcttttgcttcctttttttggaagatgggacgtggg  30049200                                              --------->ARR11(3)                                      --------->ATHB51                                      --------->AHL20(2)                                     <---------YAB1                                     --------->ICU4 <---------TOE1(2)                 --------->YAB1 <---------TOE2(2)                 <--------HAHB4 ------ZAT18                       <---------ICU4                                         --------->AHL20(2) ->ALFIN1                --------->YAB1      <------ZmHOX2a(1)     <---------ZAT6      --------->YAB1 -----ANAC46--------->AtMYB61     <---------YAB1             <---------ICU4            --------->AHL20(2) -----PCF2  <---------ALFIN1<-----------GT1<---------TOE2(3)--------->ICU4        --------->AHL20(2) -------ANAC46<---------ALFIN1    --------->ICU4            <---------YAB1    <---------ANAC46      - ----DEAR3(1) --------->ANAC46    <---------ATHB12        --------->YAB1      ----------->GT1      <-   gcgcatgtttcagaccacacctcttaattttaactaatcattatttaggattttgaacattgataattagagatagagagccgtttaaattataaaatgt  30049300                                                                            --------->At4g35610                                                                         <---------At4g35610                                                       --------->ANAC58 ---------->TaMYB80                                                       --------->ANAC46 --------->ARR14(2)                                                       --------->AtLEC2 <---------ARR14(2)                                               ----------------->AG     --------->GLK1(2)                                            <---------GLK1(1)          --------->GLK1(1)                                            --------->GLK1(1)      ------->GAMYB         >>>>>>>>>MYB98                    --------->ARR14(2)  <---------WRKY12     ----------->GT1                       <---------GLK1(2)   <---------WRKY38(1) -------->YAB1        <---------YAB1       <---------ARR14(2)<-----------HVH21                 <----- --------YAB1       ----------->GT1<-----------HVH21   --------->ANAC58<---------GLK1(1)--------->AtLEC2   tatcatatagtaacatactaaaatgtgattacacccttgtcactggattccctaaacatgcaatgtcaacggggaatctgctacgtttccatacacatac  30049400                                                                  ------->MYC2                                                                  --------->TOE1(2)                                                                  <-------MYC2                                                          --------->YAB1                                                         <---------YAB1                        ------                                     ------>ZmHOX2a(1)  <---------ARR11(3)                     <-----                                 ------->TEIL    <---------AtLEC2 ------->MYC3                <------  ------->TEIL             <-------TEIL--------->REM1(1)--------->ARR11(3)           --------->YAB1<- --TEIL               --------->YAB1--------->TOE1(2) ------->TEIL<-------MYC3 <----------DOF2-------   agtgtatgtcttcttgtgtttgtatcatgttcatgaatcctacaacaatttgcatgaatatcatcaaacgtgcaatgttgtctttaaacataagtcatga  30049500                                                                       ----------------->AGL3                                                                --------->ATHB51                                                                --------->ATHB12                                                                --------->YAB1                                                                <---------ICU4                                                                <------------ATHB5                                                               <---------ATHB51                     - --->ATHB12                                                    --------->ICU4                       - ----ICU4                                          ----------->GT1   <---------PCF2                 - ---YAB1                   <-----------HVH21   --------->DAG2  <---------ATHB12                    -- --------LBD16        ---------->DOF2         ---------->DOF2--------->WOX13(1)               ------- -->ICU4    <------ZmHOX2a(1)              ----------->TBP ------------>CBF             <----------DOF2   tttcggaaccaagaggaaaacttgaaaagggtcatttagtggcccataaaaagcggataatatcaattatgggcccaaaaataggcccatctttatcgtc  30049600  Previous    Next  AGI:  At1g79860.1    Description:  ATROPGEF12/MEE64/ROPGEF12 (MATERNAL EFFECT EMBRYO ARREST 64); Rho guanyl-nucleotide exchange factor/. similar to ATROPGEF8/ROPGEF8 (KINASE PARTNER PROTEIN-LIKE), Rho guanyl-nucleotide exchange factor/ [Arabidopsis thaliana] (TAIR:AT3G24620.1); similar to pollen-specific kinase partner protein [Lycopersicon esculentum] (GB:AAW57535.1); contains InterPro domain Protein of unknown function DUF315, plant (InterPro:IPR005512) Range:  from: 30046985    to: 30049068    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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