Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <----------DOF2                                            <---------DAG2                                         <-----------GT1                                      <----------DOF2                                     <------------------------ANAC81   <---------YAB1                   ------>ZmHOX2a(1)                                          <----- ---------YAB1             --------->ARR11(3)          <----------DOF2            ----------->GT1   ttcttattagtcaaattgtttcccttatagttcttctcctcttttacttttcttcatctttttgtttcattcatcgaacccttatggtataatccaattt  30024200                                                                                            ------->GAMYB                                                                                           <---------MYB52(2)                                                            --------->MYB52(1)       --------->WOX13(1)                                                           ------->GAMYB          --------->ARR11(3)                              <---------DAG2              <---------MYB52(2)      --------->GLK1(2)                  --------->YAB1                          --------->MYB46(3)      <---------ARR11(3)                 <---------YAB1                        --------->YAB1        --------->AHL20(2)               --------->YAB1 <----------DOF2         <---------ATHB12      --------->AHL20(2)        ----------->HVH21  <-----------GT1          --------->WOX13(1)  --------->AHL20(2) --------->MYB46(3) ----AHL20(2) --------->AHL20(2)  <-----------GT1 <---------ATHB12----------->GT1--------->RVE1(1)   atgttcttctctgacatttattataagttttacttttcactgttcaaaacaaatcaatcaacaaactgtggaaaaaaaataaaaaatctatcaacaaact  30024300                                                                     --------->YAB1                --------->YAB1                                      <---------YAB1              <---------YAB1                                    <---------ANAC58           <---------YAB1                                       <---------ANAC58           <---------MYB52(1)                                   <---------ANAC46          --------->TOE2(3)                                --------->YAB1   ---------->DOF2         ----------->GT1                                  <---------YAB1 <-----------GT1         <---   acacaagagcatcgttattaatagtttcttaaaacaattcttaagttaagagacagtcttataatagcttataattaacaaagtctcataaataagagac  30024400                                                                   --------->YAB1                                                                   <------ZmHOX2a(1)                                                                  ----------->GT1                                                                 <---------TOE2(3)                                                           <---------YAB1                           --------->ARR11(3)           ==================HOX2a_HOX2a                           <---------ARR11(3)           <------ZmHOX2a(2) <---------AHL20(2)                          <---------CCA1(2)            <---------ARR11(3)--------->AHL20(2)  <-----------GT1    --------->ANAC46                  --------->ARR11(3)<---------AHL20(2)        -- -------DOF2     --------->CCA1(2)            <---------ZAT6    --------->YAB1    <---------MYB52(1)   tttaatacaattttgttagatataagacatatctcttaactaagagtaatgttaagagatcatcaataaggataattttatgtcgttagtactaatagaa  30024500                                <---------YAB1                                <---------AHL20(2)                     --------->CCA1(2)                    <---------ARR14(2)                    --------->ARR14(2)                             <----------DOF2                 --     --------->STY1(1)       <----------DOF2               --------->CCA1(2)         <----------DOF2 ------>NtERF2      --------->ARR11(1)         <---------------AGL15              ------->TEIL   ---- ------->LBD16      --------->ARR11(3)        <-----------------AGL3    <-----------GT1   <----------ID1   ccgggccctagagtttgtaacagatatgggcctttttattgctatgggcctatttttggtgatatgggtctttaataccatatgagccttttaagacaaa  30024600            --------->DAG2                                                              --------->ALFIN1           ---------->DOF2                                                            <---------ANAC58      <---------YAB1                                  >>>>>>>>>TBF1                   <---------ANAC58   --------->GLK1(2)                        ---------->DOF2                          <---------MYB46(3) ------->YAB1   ----------->GT1      *TSS <---------YAB1 ---------->DOF2     ------->TEIL     <------ ----->AHL20(2)--------->ALFIN1    ------------>CBF>>>>>>>>>TBF1<------ZmHOX2a(1) <-----------RAV1(1)   ataataatctgataaaagtggtgaatcaagaagactaaacaattttgaaagaagaagaagaaaggaggagacatggatgaatctctgtgggtgtgagtgt  30024700                                                        <-----------HVH21                                                       <---------O2                                                       ===================================bZIP_DOF                                                       <---------TGA1a                                                       --------->TGA1a                                                  --------->ARR11(3)                                                ----------->ARR10                         --------->At4g35610   --------->SPL7                         <---------At4g35610 --------->At5g28300                    <---------ANAC58      ----------->GT1   ------->TEIL        ----------->GT1      --------->REM1(1)  <---------ANAC58-  ---------->DOF2  --------->MYB52(1) ===========================bZIP_DOF      <----------DOF2     -- ---ZAT6        --------->ANAC46      ---------->DOF2  --------->O2      <-----------GT1          <--   gagacaaagagagaaaacaaacaacgtagctgtagattggaaaagacggtaagaccctcgtcgggcttcatcaataaacaactttgccttgttgtctatc  30024800                                                ----------->RAV1(2)                                        <---------ANAC46                                        --------->DEAR3(1)                                       --------->ATERF1(1)          ------>ZmHOX2a(2)                                       <------NtERF2                ===============================HOX2a_HOX2a                                       --------->RAP2.3(1)         ================================HOX2a_HOX2a                                      ------>NtERF2                --------->ARR14(1)                                      <---------RAP2.3(1)          <------ZmHOX2a(2)                                     --------->bZIP60(1)     <---------ANAC58                                     <---------bZIP60(1)     <---------ANAC58                                  <---------ATHB12           <---------ANAC46                                  ----------->HVH21<---------At4g35610                                  ----------->TGA1 --------->At4g35610     <-----------GT1         ------>NtERF2    --------->ANAC58    <---------ARR14(2)          <------ <------NtERF2              --------->DEAR3(1)--------->ANAC58    --------->ARR14(2)        ------>ZmHOX2a(1) -------->LBD16             --------->DREB2C(2)------>NtERF2--------->ATHB12                --------- ------->LBD16           --------->REM1(1)    --------->ANAC46  ----------->ARR10      <---------ANAC58 -------LBD16            <---------ALFIN1------>NtERF2     <---------YAB1   -------->P <---------ANAC58   gccggaattacaaaccctagccctgctacaccgccaatgacgccgtctacgcctgcagacgatgcttggatccgctcttaccagcgcttgcttcctgaat  30024900                          <------MYB46(1)                          <---------HSFB2a(1)                          --------->HSFB2a(1)                          --------->HSFC1(2)                          <------MYB83                          <---------HSFC1(2)                         --------->MYB59                         ----------->ARR10                         <---------AtMYB61                   <----------DOF2                         --------->MYB46(2)            <---------TGA1a                         --------->MYB111(1)           <---------ANAC58                        <---------MYB55(1)             <---------bZIP60(2)                        <--------P                     =================bZIP_DOF                        =========================================MYC_MYB                       <---------MYB52(1)              --------->O2                     --------->LBD16                   <---------ANAC46   <---------AHL20(2)                     ------>NtERF2                     <---------O2 <---------ANAC58                    <---------ANAC46        <---------ANAC46<---------ANAC58                   <------NtERF2            <---------ANAC58<---------ANAC46                   <---------LBD16          <---------ANAC58<---------ANAC58 <-----------RAV1(1)                  ------>NtERF2     <-----------RAV1(2)<---------ANAC58  --------->AHL20(2)       <-- ---GLK1(2)      --------->ANAC46   <---------LBD16 <-----------RAV1(1) <---------YAB1         <----- >LBD16         <---------LBD16     ============================RAV <---------ANAC58<----------DOF2   cgcagtctcttctcgcttcccgccgggtaggttctgtctcagggatgcttgtttgtgtcgtggcttgtttgcttattatatgtggtctttgatggcagtc  30025000                                               --------------->AGL15                                               <---------------AGL15                                           --------->ANAC58        <--------P                         --------->ANAC58  <-----------GT1                       <---------ZAT2 -----GAMYB                             --------->ZAT2              --------->ICU4       <---------TOE1(3) ----MYB52(1)        <---------ZAT6 --------->ANAC46        <-----------HVH21            <---------TOE2(3)   agttataccggttgcaatctctagagtgaatcagttcgacgcagcacgactagatgtggaaatgtcagccatgttgaaggaacagctcgttaaggttttc  30025100  Previous    Next  AGI:  At1g79800.1    Description:  plastocyanin-like domain-containing protein. similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G48940.1); similar to NtEPc-like protein [Nicotiana tabacum] (GB:BAC53926.1); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) Range:  from: 30023442    to: 30024110    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g79810.1    Description:  TED3 (REVERSAL OF THE DET PHENOTYPE); protein binding / zinc ion binding. Identical to Peroxisome assembly protein 2 (PEX2) [Arabidopsis Thaliana] (GB:Q9CA86;GB:Q8LFI7;GB:Q9M9Z9); similar to unnamed protein product [Vitis vinifera] (GB:CAO45868.1); contains InterPro domain Pex, N-terminal; (InterPro:IPR006845); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 30024637    to: 30027379    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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