Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      ------>ZmHOX2a(1)                                               <---------ZAT2                                               <---------At4g35610                                              --------->ANAC58                                           <---------STY1(2)                                           --------->STY1(2)                                         --------->HSFB2a(2)           --------->YAB1                <---------HSFB2a(2)              ----------->GT1          <---------ATHB12          --------->HSFB2a(1)               --------->At4g35610    ------>MYB83                    <---------HSFB2a(1)               <---------At4g35610          --    ------>MYB46(1)                 --------->HSFC1(2)            <-----------HVH21            ------ ----------GT1                      <---------HSFC1(2) ------>ZmHOX2a(1) <------ZmHOX2a(1) ---------- -->WOX13(1)                  ---------->DOF2 --------->ANAC58 ---------->DOF2       ----------->GT1   ctcaccttccaaatcaaaatccctcccatctataaagaagtttctagcaagctcctcctaaaaccaaaagtcagaggagataatatgaagaaaaaaagaa  30022700         <---------MYB46(3)        <---------------AtSPL3        <---------AtMYB61        --------------->AtSPL3        --------------->AtSPL8                                  <---------ANAC58        <---------------AtSPL8                                  <---------ANAC46     <---------AtMYB61                                          <---------ANAC58     --------->ATHB12     --------->ALFIN1       --------->YAB1                     <---------MYB46(3)  <----------DOF2  --------->DAG2<---------ALFIN1                              --------->ALFIN1    <---------ANAC58 -------->DOF2<---------MYB59      <----------DOF2         <---------MYB46(3)     <---------ANAC58 ---->DOF2  --------->SPL7 <---------ATHB12            --------->AtMYB61     --------->MYB111(1)    - >DOF2<---------MYB46(3) --------->WOX13(1)     <------ZmHOX2a(2)            <---------MYB46(3) <----   agaaagagtggtggtacctcacctcatcaatcaaacccttttcaaattcgatccagaccatcgggtgcttgcactctagtagttgcttcattggcattct  30022800                                                                             --------->HSFB2a(1)                                                     <---------DAG2          <---------HSFB2a(1)                                               --------->GLK1(1)            --------->SPL7                                    --------->AHL20(2)                     <---------ARR14(2)    ----                                    <---------AHL20(2)                     --------->ARR14(2)    <---                             <---------HSFB2a(2)  <-----------GT1         <------NtERF2          ----                            ----------->GT1    <---------GLK1(1)         <------NtERF2          <----       --------->TOE2(3)  ------->TEIL       <------ZmHOX2a(1)           --------->LBD16      -------    <---------ALFIN1 --------->YAB1 --------->AHL20(1)                  --------->RAP2.6(2)  <------- ----->ZmHOX2a(2)--------->ATHB12   <---------AHL20(1)         --------->LBD16    ------>ZmHOX2a(1) - -----YAB1      <---------YAB1     --------->AHL20(2)<----------DOF2   <---------LBD16 ---------->DOF2   gatccacaacctcagtttatcattgatgaatcgagaaataaattcgaggatttcactttctcacccgaagaaggccggaacgtcctggtaaaaggggtca  30022900                                                                       <---------At4g35610                                           <---------DAG2              --------->At4g35610                          <------ZmHOX2a(1)<----------DOF2             <---------ZAT2                <---------bZIP60(2)  <---------At4g35610               --------->ZAT2                <---------ANAC46     <---------HSFB2a(1)              <-----------RAV1(1) ----->ANAC58   <---------bZIP60(1)  --------->HSFB2a(1)            --------->At4g35610 ------ANAC55(2)<---------O2         <---------HSFC1(2)             <---------ZAT2 ----->ANAC58   --------->O2  --------->GLK1(2)                     <---------At4g35610 -----LBD16     --------->bZIP60(1)  --------->HSFC1(2)            <-----------RAV1(1)          ----- ---->HVH21  ----------->TGA1 <---------ARR14(2)       --------->GLK1(1)  ------>NtERF2      -------- ----HVH21   ----------->HVH21--------->ARR14(2) --------->LBD16--------->AtMYB61     --------->ANAC58 -------->SPL7<---------TGA2(2)      --------->At4g35610        <---------ALFIN1      --------->ANAC58   cggacgatggtgtccatgacgtcgaagaggagaatcggaagcttccttttccgagagatttcatcaccactgctgctgcccagacagcaagaacccgagg  30023000                                                                        <------NtERF2                                                                       ------>NtERF2                                                                       <---------ATERF1(1)                                                                      --------->RRTF1(2)                                                                      --------->ATERF1(2)                                                                      --------->DEAR3(1)                                                                      --------->RAP2.3(2)                                                                      --------->RAP2.3(3)                                                                      --------->ANAC46                                                                     <------NtERF2                                                                     --------->ORA47(2)                                                                     --------->ERF1                                                                     --------->RAP2.3(1)                                                                     --------->RAP2.6(1)                                                                     --------->DEAR4(2)                                                                     --------->ATERF1(1)                                                                     --------->RRTF1(1)                                                                    <---------DREB2C(1)                                                                    <---------RAP2.3(1)                                                                    ------>NtERF2                                                                    <---------At4g35610                                                                    --------->ABI4(1)                                                                    --------->At4g35610                                                                    <---------ATERF1(1)                                                                    <---------DEAR4(2)                                                                   --------->RAP2.6(2)                                                                   --------->RAP2.3(2)                                                                   --------->ANAC46                                                                   <---------DEAR3(1)                                                                   <---------ATERF1(2)                                                                   --------->ATERF1(2)                                                                   --------->RRTF1(3)                                                                   --------->RAP2.3(3)                                                                   --------->DEAR3(1)                                                                   --------->RRTF1(2)                                                                  <------NtERF2                                                                  --------->RAP2.6(1)                                                                  --------->RRTF1(1)                                                                  --------->DEAR4(2)                                                                  --------->ATERF1(1)                                                                  --------->RAP2.3(1)                                                                  --------->ERF1                                                                 <---------RAP2.3(1)                                                                 <---------DEAR4(2)                                                                 <---------ATERF1(1)                                                                 ------>NtERF2                                                                 <---------At4g35610                                                                 --------->At4g35610                                                                 <---------DREB2C(1)                                                                 --------->ABI4(1)                                                                --------->ANAC46                                                                --------->RAP2.3(2)                                                                <---------DEAR3(1)                                                                --------->DEAR3(1)                                                                --------->RAP2.3(3)                                                                --------->ATERF1(2)                                                                <---------ATERF1(2)                                                               --------->ORA47(2)                                                               --------->ERF1                                                          <---------AtLEC2                                                      --------->ALFIN1--------->DREB2C(2)                                                      <---------ANAC46--------->RAP2.6(2)                                                      <---------ANAC58<---------ATERF1(2)                                                  --------------------->WRI1--------->YAB1                     <-----------RAV1(1)         --------->DEAR3(1)<---------ALFIN1                    ------->MYC3               --------->LBD16 --------->ATERF1(1)       --------->ARR14(2)                      ------>NtERF2   --------->DEAR4(2)       <---------ARR14(2) <------MYB46(1)      <---------At4g35610--------->ORA47(2)       <---------GLK1(2)  <---------ANAC58   <---------LBD16   --------->RAP2.3(1)      <------ZmHOX2a(1)   <------MYB83    --------->GLK1(1)   <---------ATERF1(1) ->NtERF2           <-------MYC3   <---------WOX13(1) <---------ANAC58--------->RRTF1(3) ->LBD16    <<<<<<<<<TBF1 <---------ANAC58<---------GLK1(1)  --------->DEAR3(1)   cccgaacaggattcttcttccacatgttgggtttcagattgatgaattccgccgatgtgtgcatcgccgccgccgccatcagaaactacctagtttctag  30023100                                                                                       <-----------HVH21                                                                                       <-----------TGA1                                                                                      --------->O2                                                                                      --------->TGA1a                                                                                      <---------O2                                                                                      --------->ANAC46                                                                                      <---------TGA1a                                                                                      --------->ANAC58                                                                                    <---------ALFIN1                                                                                   <---------WRKY38(1)                                                                                   <---------WRKY12                                                                                   <---------WRKY45          <---------ICU4                                                        <------MYB83          --------->ATHB12                                                      <------MYB46(1)         <---------YAB1                               ----------->GT1         <---------WOX13(1)   <-       <---------ICU4                           --------->REM1(2)            <------------CBF    <---       --------->YAB1                       <------NtERF2                   --------->ATHB12    -----      <---------YAB1                    --------->ANAC58                    <---------MYB46(3) ------    --------->YAB1                      --------->ANAC58                 ----------------------->TaNAC69(2)   <---------ATHB12       <-----------RAV1(2)<---------ANAC46           --------->DAG2--------->ANAC58   <------ZmHOX2a(2)    *TSS            --------->ANAC46            <------ZmHOX2a(1) --------->bZIP60(2)   ttccgatcatcatcatttgtaaatgacaacaggggagtcgaaacgcagcgtttagagagaaaatcgcagaggagaaggtgattggtccacgtcagtaatt  30023200      --------->ALFIN1    <---------TGA1a    --------->bZIP60(1)    <---------O2    <---------bZIP60(2)    --------->O2    <---------ANAC55(1)    <---------bZIP60(1)    <---------ANAC58    <---------ANAC55(2)    <---------ANAC58    <---------ANAC46    --------->ANAC55(2)   ----------->STF1   <-----------------------TaNAC69(2)                                                             ---  <---------TGA2(2)                                                                      <---------ALFIN1 ----------->TGA1                           <------ZmHOX2a(1)                           --------->ANAC58 ----------->HVH21                     --------->ANAC58           <-----------GT1       --------->ANAC58 -----ZmHOX2a(1)              <---------ANAC46                --------->AHL20(2)        --------->ANAC46 ------TOE2(3)                <---------ANAC58             <---------AHL20(2)     --------->At4g35610 ---->YAB1          --------->ALFIN1   --------->ANAC58   --------->AHL20(2)      <---------At4g35610 --->ICU4     >>>>>>>>>TBF1   <---------ANAC58            <---------AHL20(2)   <-------TEIL    ------   aggatgacgtggtgaagaagaagtggcccatgacttgcagcacgaaggagaatgaatgaattaaataaaaaccgtttcaaattcatctccacgactcctc  30023300                     <----------DOF2               --------->DEAR3(1)               --------->ANAC46                                                                 -----               --------->DREB2C(2)                                                           --------               ------->GAMYB                                                              --------->TOE2(2)               --------->RAP2.6(2)                                                        <---------SPL7               --------->ANAC58                                     <-----------GT1       --------->TOE1(2)               --------->ANAC58                         --------->RAP2.6(2)              <---------ANAC55(2)              --------->MYB46(3)                        <---------ALFIN1                -------------              <---------MYB55(2)                     --------->ANAC58         --------->YAB1 --------        --------->At4g35610                          --------->ANAC58   --------->ANAC58<-------TEIL        <---------At4g35610                --------->DAG2        <---------ICU4   ---------->DOF2 <------NtERF2--------->DEAR3(2)          ---------->DOF2------>NtERF2  --------->ANAC58------------- <---------LBD16  <---------ALFIN1     ----------->TBP --------->MYB46(3)     ------->GAMYB --------- --->NtERF2   <------------AtMYB77   --------->AHL20(2)<---------MYB55(2)    --------->MYB46(3) <---- >ZmHOX2a(1)<---------ALFIN1         <-----------TBP --------->ANAC46   --------->ANAC46<------------   ggcctcggagagctcaaccgccactttccttctccttgtttatataaagcagagccagccaccttcatttttacacacaaccatcaaagctacgtacgaa  30023400                                                          <---------ARR11(3)                                                          <---------ARR14(2)                                                          --------->ARR11(3)                                                   <---------YAB1                                                   --------->ICU4 ------>ZmHOX2a(1)                               --------->YAB1 ---->GLK1(1)                                   --------->ICU4 ->ANAC58                                       <---------YAB1 -->AtSPL3                                    --------->YAB1------>ZmHOX2a(2) ->ANAC58                                    --------->ICU4--------->CCA1(2) -->AtSPL8                                   <---------YAB1<------ZmHOX2a(2) >SPL7  --------->YAB1                     --------->YAB1 --------->AGP1 -----GLK1(1)               <----------ID1--------->ICU4  --------->ARR14(2)                   <----- ---AtSPL3               ---------->DOF2  <---------YAB1----------->ARR10  --------->ZAT6      ------   ttcctctcaaacatactatatacttacaaaagaacaagaagatgatgatgatgatgatgagatctacttgtaatctaacactaatgctctgcatttgtgc  30023500                          <---------ARR11(3)                         <------MYB46(1)                         <---------HSFC1(2)                   --------->ATERF1(1)                   <------NtERF2                   --------->At4g35610                   --------->RAP2.3(1)                   <---------At4g35610                   <---------LBD16                  <---------ATERF1(1)                  <---------ERF1                  <---------RAP2.6(1)                  <---------RAP2.3(1)                  <---------RRTF1(1)                  ------>NtERF2                  <---------ORA47(2)                 <---------RRTF1(3)                 <---------DREB2C(2)                 <---------RAP2.3(3)                 <---------RAP2.6(2)                 <---------RAP2.3(2)                 <---------ATERF1(2)                 <---------ANAC46                 --------->ATERF1(2)                 <---------RRTF1(2)                 <---------DEAR3(1)        <---------ANAC46 <------MYB83        <---------ANAC58 --------->HSFB2a(1)                                            <---------At4g35610        <---------ANAC58 --------->HSFC1(2)   <------MYB83               --------->ANAC46       <------NtERF2<---------ANAC46     <---------TOE1(3)               --------->ANAC58   <--------     <---------RAP2.6(2) <---------HSFB2a(1)<--------P                   --------->ANAC58 <---------MYB46(3)  <-----------RAV1(1) <------NtERF2      <---------TOE2(3)             <---------ALFIN1 --------->At4g35610  <---------AtMYB61<---------------------WRI1 <------MYB46(1)       --------->PCF2--------->ATHB12 ----ZAT18      --------->RAP2.6(3) --------->GLK1(1)        --------->ALFIN1    --------->ICU4    -- --->ZAT18  <---------AtLEC2  ------>ZmHOX2a(1)            <---------ANAC46      <---------YAB1<-----   ccttgtggtggcttccatggcggcggaaggtcctagggatttcaaggttggagacgagttcgggtggagagtcccactccagaatgattcagcggtttac  30023600  Previous    Next  AGI:  At1g79790.1    Description:  haloacid dehalogenase-like hydrolase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO23006.1); contains InterPro domain Haloacid dehalogenase-like hydrolase; (InterPro:IPR005834); contains InterPro domain HAD-superfamily hydrolase, subfamily IA, variant 3 (InterPro:IPR006402) Range:  from: 30021795    to: 30023124    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g79800.1    Description:  plastocyanin-like domain-containing protein. similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G48940.1); similar to NtEPc-like protein [Nicotiana tabacum] (GB:BAC53926.1); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) Range:  from: 30023442    to: 30024110    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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