Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  ------->TEIL      <---------TOE2(3)                                     ------>MYB83           <---------AHL20(2)              ---------            --------->YAB1           ------>MYB46(1)      --------->TOE2(3) <------ZmHOX2a(1)      --------->ZAT6    <---------ARR11(3)   --------->ANAC46  <---------WOX13(1)           ---------    <-----------GT1     --------->GLK1(2)    --------->ANAC58<---------AHL20(2)     ----------->GT1 --------->YAB1         --------->ARR11(3)   --------->ANAC58--------->ATHB12      --------->GLK1(2) ---ZAT6  <-----------HVH21     <-----------GT1 <-------TEIL--------->AHL20(2) <------ZmHOX2a(1)   --   tagttataacactatcacatctcaaaaatctaattaacctatcgtccacgtacatacaaatattaattgatgttataaggaggagaatgtgaaacatatg  30020400                       --------->ARR14(2)               <---------YAB1                                                    ------->TEIL   --------->AHL20(2)  <---------ARR14(2)                                       <-----------GT1 ----------->GT1 --------->WOX13(1)        <---------ANAC58                  --------------->AtSPL8 >TOE2(2)     --------->ARR11(3)           <---------ANAC58            --------->ANAC58            <- >TOE1(2)    --------->YAB1                <---------ANAC46            --------->ANAC58      ------->TEIL -------->DOF2<---------ARR11(3)<----------DOF2       --------->At4g35610 <---------YAB1     <-------TEIL   agaaagtaaatacaaatatcattcaaatcgggttctttggcatttgcgtcttaataagcagagaacatgaggcacgctgattgtacctgctcatgtacat  30020500                                                               <---------AHL20(2)                                                               --------->AHL20(2)                                                           <---------AHL20(2)                                                           --------->AHL20(2)                                                       <---------ANAC55(2)       <---------KAN4(2)                       --------->ARR11(3)            --------->AHL20(2)    ---------->DOF2        --------->ANAC58    <---------AHL20(2)   --------->AHL20(2)  --------->CCA1(2)        --------->ANAC58----------->GT1          <---------AHL20(2) <---------AHL20(1)            <--  --------->CCA1(2)    <---------ARR11(3)       <---------AHL20(2)  --------->AHL20(1)     <---------ANAC58 --------ZAT6 --------->LBD16    <-----------GT1--------->AHL20(2) --------->AHL20(2)      <---------ANAC58   agagatagacaagtcccccaatagagatgtttatttttccatcccattttttaaattacatataaataaatatataagaaaggaatgagctaggcttgat  30020600                                                                                               ------                                                                                            ---------                                                                                      --------->ANAC46                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                                                      <---------ANAC55(2)                                                                                      --------->ANAC55(1)                                                                                     <---------LBD16                                                                                    <---------ALFIN1                                                                                  ----------->RAV1(1)                                                                                --------->At4g35610           <----------DOF2                                                   --------->At4g35610         ---------->ID1                                                      <---------At4g35610    <       <---------ANAC58                                                   <------ZmHOX2a(1) ---------       <---------ANAC58     ---------->DOF2----------->GT1             <------ZmHOX2a(1)   --------->DAG2    <----------DOF2     ---------->DOF2    <---------ANAC46         <-----------RAV1(2)   ---------->DOF2 ---------GT1         <---------YAB1  ---------->DOF2---------->DOF2==========================RAV <--   tcacaactttcgtctttttttgttataaaagaaagaaatacaaagtcgtataaaaaaaagagagagcgaaacaggaggaagcagcaacacggaaaaggtg  30020700                                                                          --------->DAG2                                                                 <---------AHL20(2)                                                                 --------->AHL20(2)     ---------->DOF2                                            --------->YAB1 --->ALFIN1     --------------->AGL15             <---------ANAC46   --------->AHL20(2) --------------->ANAC81----------->GT1            <---------ANAC58 --------->YAB1    <---------CCA1(2) ------ZmHOX2a(1)     <---------AtMYB61           <---------ANAC58*TSS--------->AHL20(2) >DAG2      <---------ZAT14 ---------->DOF2   <XXXXXXXXXXXXXXXXXXXXMIR403---------->DOF2 -------ANAC46  <---------------AGL15  <------ZmHOX2a(1)       ----------->TBP  <------ZmHOX2a(1) ---   gaggagaaaaagagagtacttgttgtggtataaagaatgaaggagtgagtttgtgtgtgagttttataaaaataaaaaagcaggagcatatcacacaaac  30020800                                                                                            ---------                                                     <---------ANAC46                      <-------PIF5                                                    <------NtERF2                          ------->PIF5                                                  --------->ALFIN1                        <---------At4g35610                                                  <---------ANAC46                        --------->ZAT2                                                  <---------DEAR3(1)                      --------->At4g35610                                                 --------->ATERF1(1)                      <---------ZAT2                                                <---------MYB46(3)                      <-----------RAV1(2)                                               <---------DEAR3(1)    ----------->GT1   <---------ZAT18                                               --------->ALFIN1<------ZmHOX2a(1)       <---------ZAT14                       <---------ANAC46        <---------AtMYB61  <------ZmHOX2a(1)    --------->ZAT14 --------->MYB52(1) ----------->TGA1        <---------AtMYB61--------->ALFIN1  <------ZmHOX2a(1)   <- ------>ANAC46      ----------->HVH21       --------->ALFIN1<------ZmHOX2a(1)<---------TOE2(3)<------NtERF2   aaacaacgtagaaagggttcgaatgacgagtaatggagaagggggagaggtggtggcgaagaggaggaggaagggaattaaggagctagtgcaggtggct  30020900               <---------At4g35610           <---------ANAC58                        <---------At4g35610           <---------ANAC58             ----------->HVH21         <---------MYB46(3)             --------->ALFIN1       <-------GAMYB                   <------NtERF2      <------MYB46(1)                <---------DEAR3(1)      <------MYB83          --------->ANAC58  ----------->HVH21                            --------->ZAT18      <---------MYB46(3)    --------->ANAC58--------->At4g35610    --------->ALFIN1        <---------ZAT18     <---------AtMYB61    <---------ALFIN1  <---------At4g35610  --------->ALFIN1        <---------At4g35610 >ALFIN1<--------P--------->At4g35610<---------DREB2C(2)     --------->ALFIN1   --------->ANAC46 ----------RAV1(2)<---------At4g35610<---------ANAC46       <------ZmHOX2a(1)  <---------LBD16   ctcaggggaggttgtttggctgcttcagccacggccatggcggtgatgctgaccgctactgaggagggagtggcagacatctacggcttcaagctcactc  30021000                                                                           <---------ICU4                                                                           --------->YAB1                               <-----------HVH21                          <---------YAB1                           -------->P                                     --------->ICU4                           ------>MYB83                                  --------->AHL20(2)                           ------>MYB46(1)<<<<<<<<<TBF1                  <---------AHL20(1)                          ------>ZmHOX2a(1)              <<<<<<<<<TBF1   <---------AHL20(2)             <----------DOF2  --------->ANAC46     ---------->ID1       --------->YAB1           ----  ------>ZmHOX2a(1)      <---------MYB111(2) <<<<<<<<<TBF1             <---------YAB1         -------   tctcctccaactggtctttctctccctcctaccagtcagtcttcttcttcttcgtcttcttcttcttacgagcattataattagggacagacatagcaat  30021100                                         ---------->DOF2                                        --------->AHL20(2)                                        <---------AHL20(2)                                     --------->YAB1                                    <---------YAB1                                   --------->AHL20(1)                                   --------->AHL20(2)                                        <-------                                   <---------AHL20(2)                                        --------                                   <---------AHL20(1)                                     --------->LBD16                                  --------->YAB1                                        <---------LBD16                                 <---------AHL20(2)                                   --------->GLK1(2)                                 <---------YAB1                                    --------->ARR14(2)       <----------DOF2        <---------AHL20(1)                             ----------->HVH21    <-----------GT1           --------->AHL20(1)                 --------->ALFIN1  <---------ARR14(2)  --------->HSFB2a(1)        <---------AHL20(2)     --------->At4g35610    <---------At4g35610  <---------HSFB2a(1)      --------->AHL20(2)      <XXXXXXXXXXXXXXXXXXXXXMIR777    <---------ARR11(3) ----->YAB1                <---------AHL20(2)  --------->DAG2 --------->GLK1(2)    --------->ARR11(3) -->WOX13(1)             --------->AHL20(2)   ---------->DOF2<---------GLK1(2)     <---------GLK1(2)   tagaattttctttttatctgaatgcatatatatatattataataaaagaaaagcagcaaaacagaatgtgtgtgttcggatgacagatattccggtgaac  30021200                                             ------>ZmHOX2a(1)                 ------>MYB83            --------->ZAT18                 ------>MYB46(1)      <---------ANAC58               <---------MYB59        <---------ANAC58                       ----------->GT1         --------->LBD16              <---------ANAC46      <----------DOF2  <---------ANAC46        <---------ANAC58         --------->ATHB51   <---------ZAT6  --------->AHL20(2)      --------- --ZAT14<---------ANAC58        --------->ICU4 --------->STY1(2)   <---------YAB1           <-------- ->ZAT14<---------ANAC46        <---------YAB1 <---------STY1(2)<---------YAB1       <---------AHL20(2)   agaaacacatccgtgaaccaaacaacaacatgacattattgtgtgtcctagctagttttaaactttgtgattatatatagtgtatatttcattcatctca  30021300  Previous    Next  AGI:  At1g79780.1    Description:  Identical to UPF0497 membrane protein At1g79780 [Arabidopsis Thaliana] (GB:Q1PFB8;GB:Q3E6P5;GB:Q9MA01); similar to integral membrane family protein [Arabidopsis thaliana] (TAIR:AT3G16300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45842.1); contains InterPro domain Conserved hypothetical protein CHP01569, trans-membrane plant (InterPro:IPR006459); contains InterPro domain Protein of unknown function DUF588 (InterPro:IPR006702) Range:  from: 30020766    to: 30021749    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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