Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <-----------GT1            --------->YAB1                        <---------ICU4             --------->YAB1                          <---------AHL20(2)                    --------------->AGL15       --------->TOE2(3)                          --------->AHL20(2)                   <---------MYB59      <------ZmHOX2a(1)                               --------->AHL20(2)                 ------->TEIL         <---------TOE1(3)    --------->ANAC58            --------->AHL20(2) ------->GLK1(1)<---------CCA1(2)     <---------TOE2(3)    --------->ANAC58  <-----------GT1   <-----   gatttcatgctacaaaatgtatctaatttttgcaatctctaaggaaactacattaatgagaacgaaatgaacaccaagtttacagttcattaaaaaaatg  30018900                            <---------At4g35610                            <------NtERF2                            --------->At4g35610                           ------>NtERF2                          --------->ATERF1(2)                          <---------ATERF1(2)                          --------->bZIP60(1)                                <---------AtLEC2                          <---------bZIP60(1)          --------------------->WRI1                          <---------RAP2.6(2) <---------TOE2(3)         --------->ARR14(2)                         --------->RAP2.6(3)<---------AHL20(2)          <---------ARR14(2)                       ----------->HVH21 --------->AHL20(2)            <---------CCA1(2)            -                       ----------->TGA1 --------->AHL20(2)          --------->LBD16                -- -----ID1      <------ZmHOX2a(2)        <---------AHL20(2)      <-----------GT1   ------->TEIL     <-   acaaaagtttagttgagatcgattagtgacggcagacaaaaaataaataatgtttttgtttgtatatatccccatatatgcatgaactcaatacagagag  30019000                                                             --------->ATHB12                                                       ------->MYC4                                                       <-------PIF5                                                       ------->PIF5                                                       <-------PIF4                                                       ------->MYC3                                                       <-------MYC3                                                       <-------MYC4                                                       ------->MYC2               <---------YAB1                                                       <-------MYC2<---------ANAC58                                                       ------->PIF4<---------ANAC58   ----------->GT1                                                      --------->ANAC55(2)      <---------YAB1                                     ------>ZmHOX2a(2)--------->TGA1a        <---------ICU4                                    <------ZmHOX2a(2) <---------ANAC55(2)   --------->ICU4                                   <---------ARR14(2) ===============================================                                   --------->ARR14(2) <---------TGA1a    <---------AHL20(2)  <-----------GT1                  --------->ARR11(3) --------->ANAC58 <---------------AGL15 -------->CCA1(2)        ---------->DOF2              --------->ANAC58 --------------->AGL15 -------- ------->ARR11(3)        =======================================bZIP_DOF --------->AHL20(2) --------- --------ARR11(3)  ----------->GT1<------ZmHOX2a(1)   ----------->GT1  --------->TOE2(3)   ----------   agatataccaatttagaagagttgtattaaaggctaggatccagttgcaatgtagcacgtgaattagtggcttcattaattagtattgttgtgaaaagta  30019100                                             --------->TOE1(2)                                            <---------ANAC58                                            --------->TGA1a                                            <---------TGA1a                                            <---------ANAC58                                            --------->ANAC55(2)                                            <---------ANAC55(2)                                           --------->SPL7                                           ------->TEIL                                         <---------SPL7                                        <---------ANAC55(2)                                <---------ANAC58 <---------At4g35610                                <---------ANAC46 --------->At4g35610                                <---------ANAC58 <---------bZIP60(2)                           <----------DOF2 <-------TEIL             ------------>CBF               <-     ----------->GT1 <------MYB83       --------->ANAC58           --------->ANAC58               <-- ---------->DOF2     <------MYB46(1)    --------->ANAC58 --------->ICU4          ------->TEIL     <-- =bZIP_DOF          --------->MYB59    <---------------AtSPL3      --------->ANAC46               <-- --->GT1        --------->ARR11(3)     ------------>OsbHLH66       --------->ANAC58               --- >DAG2      ---------->DOF2===========================bZIP_DOF   ----------->RAV1(1)              <-- >DOF2      ==========================================bZIP_DOF  --------->MYB46(3)       <---------REM1(2)   aaacaaagagtaagtaaagagctaggtcgctatagcgtgagcacgtacgtgagatggcaatgctgaaccacacaatacacatgaatatgtcaacacagac  30019200        <---------YAB1                                                                           ----        ----------->TBP                                            <---------MYB52(2)            <---        --------->AHL20(2)                                        <------NtERF2                  <---  --------->DEAR3(1)        --------->DEAR3(1)                    <---------At4g35610            <--- --------ALFIN1           --------->ZAT14                  --------->CCA1(2)                     ---- -------At4g35610         <---------ZAT18                 --------->ARR14(2)               <---------At4g35610 -------ABI4(2)           --------->ZAT18             *TSS<---------ARR14(2)               --------->At4g35610 -------ZAT14   ---------->DOF2                      <------------CBF                 <---------ANAC58 ------>At4g35610     ---------->CDC5               --------->ATHB12 --------->MYB52(1)<-----------HVH21 -------ZAT2   --------->AtMYB61              ---------->DOF2     --------->At4g35610 <---------ANAC58   agcaccgcttataaataccaaagcttagcgcagacgctctaggtgaaaaaaagaagattggatatggcagcaaacgggagaaggaagagcgtgagcggaa  30019300                   ---------->DOF2                 >>>>>>>>>E2Fc                 >>>>>>>>>E2Fd               --------->ANAC58               --------->DEAR3(1)              --------->ATERF1(1)              <---------LBD16              <------NtERF2              --------->RAP2.3(1)              --------->MYB46(3)             <---------ATERF1(1)            --------->DEAR3(1)            --------->RAP2.3(3)            --------->PCF2            <---------ALFIN1           <---------ALFIN1          <---------ATERF1(1)          --------->ABI4(1)          ------>NtERF2 <--------P         --------->RAP2.3(2)         --------->RAP2.6(2)         --------->DEAR3(1)        --------->ATERF1(1)        --------->RAP2.3(1)       <---------ATERF1(1)<------MYB46(1)       <---------At4g35610----------->GT1   <---------REM1(1) --------->DAG2 <------MYB46(1)--------->LBD16 <------MYB83------>NtERF2<------MYB83 ----->ZAT2<------NtERF2--------->ALFIN1 ------ZAT2--------->ATERF1(1)          <---------ZAT14 ------HSFB2a(1)------>NtERF2           --------->ZAT14                  <---------YAB1         ----- ------HSFC1(2)--------->ANAC46 --------->DAG2                    <---------TOE1(2)          <------ZmHOX2a(1) ----->HSFC1(2)--------->ANAC58---------->DOF2      <-----------HVH21<---------GLK1(2)   ---------->DOF2   gcttggtgaagccgcccccgccaaaggtagggaaaaagtcactgcataggtccctgtcagacatatcgctggattatcacagagaagaagagaaaggact  30019400                                        --------->LBD16                                      <---------LBD16               <-------TEIL                                   --------->At4g35610           <---------ANAC46                                   <---------At4g35610          <---------------AtSPL8                                   <---------ZAT2       --------->ZAT18                                   <---------ZAT14      --------->ZAT14                          ----                                  --------->ALFIN1      <---------ZAT14                       <------           <---------AtMYB61  <---------ANAC58      <------ZmHOX2a(1)                      <---------ARR11(3) --------->SPL7               <---------ANAC58   <---------------------WRI1                --------->ARR11(3) ---->ALFIN1            ---------->DOF2<---------ANAC46 <---------ZAT18         --------->ALFIN1 <---   ggggacgatagtggaggtagagaaggcaaagtgcgagtgctgcgggatgagggaggagtgcacgatggagtacatagagagggtgagggagaagttcttt  30019500                   --------->ZAT14                   <---------ZAT14             ------>NtERF2            --------->ZAT18    --------->ALFIN1       <---------GLK1(1)       ----------->HVH21       --------->GLK1(1)      --------->At5g28300       --------->CCA1(2)      <------NtERF2                                                       ---       <----------TaMYB80   <---------DEAR3(1)                                                   ----      <---------ARR14(2)    <---------ANAC46                                                     ----      --------->ARR14(2)    --------->ALFIN1                                                    <---- ----->HSFB2a(2) --------->ZAT14       <------ZmHOX2a(1)                                  ------->MYC3 ----DOF2 <---------LBD16  <---------ABI4(1)                               ------>NtERF2  <-------MYC3 ------HSFB2a(2) <---------ZAT14    <------ZmHOX2a(1)       <------ZmHOX2a(1)       <------ZmHOX2a(1)   gggaagtggatatgcggactgtgctcagaggcggtgaaggaggagagggataagagggaagaggaagggctagaaggggccttgaaggagcacatgagcg  30019600                                                                             --------->ANAC58                                                                             --------->ANAC58                                                                           ---------->DOF2                                                                --------->GLK1(1)                                                                --------->CCA1(2)                    ----------------------->TaNAC69(2)         --------->ARR14(2)               --------->ANAC58  --------->ANAC46              <---------ARR14(2)         <-------TEIL         --------->ARR14(2)               --------->ARR11(1)    <-----------RAV1(2)     ---------->TaMYB80 <---------ZAT2  --------->ARR11(3) <-------PIF5 ------>DEAR3(1)   <---------LBD16--------->LBD16   --------->bZIP60(1) --------->LBD16 ----->ATERF1(1)--------->ZAT2<---------ARR14(2)  --------->At4g35610  <---------ANAC46 ------->RAV1(2)<---------ZAT2--------->GLK1(2)--------->ZAT2  <---------ARR11(3) ------->PIF5 -----ATERF1(1)--------->ANAC58 <---------LBD16<---------At4g35610    <---------LBD16  <-----------HVH21   cctgcctcaggttcaacaagctcgggagggagtatccggctctcttccaagctgatgccatgagagatatgctccggagaagcacgaggggtcagtctat  30019700                                                                                          <---------AHL20(2)                      --------->SPL7                                                      --------->AHL20(2)                    --------->LBD16                                                    --------->TOE2(3)                   --------->ANAC55(2)                                               <---------TOE1(3)                  --------------->AtSPL3                                       <---------AHL20(1)                  --------->HSFB2a(2)                                          <-----------ARR10          ------>NtERF2                                       <---------AHL20(2) --------->TOE2(3)          <------NtERF2                                      <---------AHL20(2)--------->ARR11(3)         --------->ANAC58                              --------->TOE2(3)      <---------CCA1(2)         --------->ANAC46                      ----------->RAV1(2)  ---------->ID1   <---------TOE2(3)         --------->ANAC58                 --------->bZIP60(1)--------->AHL20(2)--------->AHL20(1)        --------->ZAT18                ------>ZmHOX2a(1)     <---------AHL20(1)<---------ARR11(3)   tatccctaagcccgccatttcccgtacttcaagctgtattcctgccatcaccagggaccttaattaatttgtctcttctaatatcttaacgtttaattta  30019800  Previous    Next  AGI:  At1g79770.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45837.1); contains InterPro domain Protein of unknown function DUF1677, plant (InterPro:IPR012876) Range:  from: 30019254    to: 30019971    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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