Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------ARR14(2)                                                --------->AGP1                                              --------->MYB59                                              ----------->ARR10                                            <--------P                                         --------->LBD16                                         ------>ZmHOX2a(1)                                         ===============HOX2a_HOX2a                                       ------>ZmHOX2a(2)                                       ===========================HOX2a_HOX2a                                      ============================HOX2a_HOX2a                                      <------ZmHOX2a(2)                                     <---------ARR14(2)                                     --------->ARR11(3)                                     --------->ARR14(2)      ---------->DOF2                                <---------MYB52(1)         <------ZmHOX2a(1)                 <-------                              --------->ATERF1(2) ================HOX2a_HOX2a              --------->YAB1                  <---------ATHB12  <---------PCF2------>ZmHOX2a(2)                        -------->HAHB4          <---------ZAT18     <---------DEAR3(1)--------->ARR14(2)                   ----------->GT1          --------->ZAT14     <---------ATERF1(2)--------->CCA1(2)                  <------ZmHOX2a(1)         <---------AtMYB61    <---------DREB2C(2)=================HOX2a_HOX2a    <------ZmHOX2a(1)   --------->ALFIN1--------->YAB1--------->ALFIN1<------ZmHOX2a(2)            <-----------RAV1(2)  >> <---------bZIP60(2)        ------>NtERF2================HOX2a_HOX2a    --------->ANAC58  --------->ICU4 --ZmHOX2a(1)   --------->WOX13(1) ----------->ARR10--------->LBD16     --------->ANAC58  <---------YAB1   atgaagtggcagtggtctcaatcaaaacgctgccggtgggatcctggttagatccgagagaggaaaagactctcaaggaagcaggaggagtaattatagt  30015900                   <---------ANAC58                   <---------ANAC58         <------NtERF2           --------->LBD16                          <---------DAG2      <------NtERF2<---------ANAC55(1)    ------->GAMYB                   <----------DOF2 ---------->DOF2     <---------ATERF1(1)        --------->HSFB2a(2)                  --------->YAB1  <---------AHL20(2)    <---------DEAR3(1)          <---------LBD16                --------->ANAC58<---------ANAC58    --------->ALFIN1 --------->ALFIN1 --------->MYB46(3)       --------->ANAC58<---------ANAC58 --YAB1<---------ANAC46--------->ALFIN1  --------->MYB46(3)  ---------->DOF2   <---------ANAC46 >>>>>ZML2         <---------ANAC46<------ZmHOX2a(1)        --------->AtMYB61 ---------->ID1   tctaggctggcgcagagagaggcgtgtggaacatccaggaacaaccgtcttgttctgagaaaccaaagcaatgagactttttcgtatataaaaaaagatg  30016000                                                                            <---------LBD16                                                                         <------NtERF2                                                                         --------->ALFIN1                                                                         --------->ATERF1(1)                                                                        <---------SPL7                                                                       <---------ANAC58                                                                       <---------ANAC46                                                                       <---------ANAC58                                                                       <---------RAP2.6(2)                                        --------->ANAC46          <---------ICU4        ---------->ID1                           ----------->GT1    --------->MYB52(1) <------ZmHOX2a(2)      <---------CCA1(2)                        --------->ICU4 <---------HSFB2a(2)      --------->ARR11(3)  <---------ANAC58          <---------MYB46(3)      --------->YAB1                <---------ARR11(3)  <---------ANAC58   agacatggacgatggatggagaaggaatgatgtaaataataccagaaacaacgagggagtgagagagatcatggcgtctggggatgccttgtctcttaga  30016100                                                                         --------->ALFIN1                                                           --------->GLK1(1)                     ----                                                           <---------GLK1(1) <---------MYB46(3)<-----                                                     <---------MYB46(3)<---------ANAC46        <-----                                                     <---------ANAC46  <---------ANAC58       <------                                                 --------->ALFIN1      <---------ANAC58      <------NtERF2                                               <---------ANAC58       <---------DEAR3(1)    ---------                                               <---------ANAC58      ------>NtERF2         --------->ATERF1(1)                                              <---------DEAR3(1)     <------NtERF2 --------->GLK1(1)                                             ------>NtERF2>>>>>>>>>>GATA-1   <---------ANAC46------>NtERF2                                            --------->DEAR3(1)      --------->DEAR3(1)     <---------DEAR3(1)                <---------ARR14(2)         <---------RAP2.6(2)     --------->ATERF1(1)     <---------RAP2.6(2)                ----------->HVH21         <---------At4g35610      <---------DEAR3(1)     <---------ZAT18               <------ZmHOX2a(1)          --------->At4g35610      <---------RAP2.6(2)  <---------At4g35610     <------ZmHOX2a(1)                    --------->RAP2.6(3)     <---------ZAT18 >>>>>>>>>>GATA-1  <------ZmHOX2a(1)               <<<<<<<<<TBF1<---------ANAC46 <---------At4g35610<---------GLK1(1)   cggaggaggagaagggaggagacggagagagtcttcttcttcagagcggccgtggtcgtggatttcagcgcggccgtggtcgtggatttcagcgcggccg  30016200                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                    --------->ZAT2                          <--------                                        --------->ANAC46                                    <--------                                        --------->ANAC58                                    --------- ------>ZmHOX2a(2)                      --------->ANAC58                                    ========= =================================HOX2a_HOX2a       <---------ZAT2                          <-------- ------->HVH21                        <---------ALFIN1                                      <-------- ----ANAC58                ------>ZmHOX2a(1)    --------->ARR14(2)           <---------ARR14(2) ----ANAC58                <---------CCA1(2)    <---------ARR14(2)    <<<<<<<<<TBF1   *TSS  --------- ---DEAR3(1)   <----------DOF2      <---------ALFIN1--------->At4g35610      --------->ARR14(2) >DEAR3(1)     <---------DAG2      ----------->HVH21<---------At4g35610      <---------GLK1(2)   tgatcgtctctcgctcactttctctcttcctatctccctcacacgctctaaatctgctgggagagagtcttcttcttcagaacctccattgttgacgtgt  30016300                                                                                               ------                                                                                               ------                                                                                              <------                                                                                          <----------                                                                                          ----------- -TGA1a                                                                                   ----------- -O2                                                                                --------------->AGL15 -ANAC46                                                                            <---------------AGL15 >ANAC55(2)                                                                        <-----------------AGL1 -ANAC55(1)                                                                        ----------------->AGL3 -ANAC58                         <---------ALFIN1                                  ----------------->AGL1 >O2 <----------DOF2       <---------ANAC55(2)           <-----------GT1           <-----------------AG ===============bZIP_DOF   <---------ANAC58        <---------DAG2                  <-----------------AGL3 -bZIP60(2)                <---------ANAC58        <----------DOF2              <-----------HVH21 <-- -ANAC58                   <---------ANAC46<---------ANAC58          <------------CBF     <---------- >TGA1a                <------------CBF    <---------ANAC58------------>CBF --------->MYB52(1)-------   cttcttccttttctatctcttcccaaattgcgtctccactccttggcttctccctttatttaccaatttgccattgctcaccggtccctgtattggtacg  30016400                                          --------->WRKY12 --->ANAC58                               --------->WRKY38(1) --->ANAC58            --------->TOE2(3)  --------->WRKY45 ---ZAT18            --------->GLK1(2)   <---------MYB52(1) -----AtSPL8         <---------ARR11(3)  --------->DOF5.7(2) ---->AtSPL8     --------->ANAC46       <-------GAMYB ---->AtSPL3   ----------->RAV1(1) <----------DOF2 --------DOF2 --------->ZAT18      <---------DAG2                                                   - -----AtSPL3  <---------ZAT18   <-----------GT1                     <----------DOF2      <----------- -->SPL7  <-----------GT1    --------->YAB1     ----------->HVH21<-----------GT1         ------------   cttttgtcaattttagcccacaaaatctaaattataacttttcgttgactctgacctctctctcttatttcttttcaattgaaaattgtgactcaaacta  30016500                                     <---------YAB1                                 -------->P                                ------->GAMYB <---------------AtSPL8                               <---------MYB46(2)                               <---------MYB52(2)                               --------->MYB46(3)                               <---------MYB55(2)    <------ZmHOX2a(1)          <---------MYB111(2)   <----------ID1              <---------MYB111(1) --------->DOF2         ---------->DOF2       <---------ZAT6       <------MYB83              <------- ----AGL15             <---------ARR14(2) <---------ZAT14          <---------MYB46(3)       <-------TEIL --->AGL15             --------->ARR14(2) --------->ZAT14          <------MYB46(1)<---------YAB1<----   gcaaaaggacagacaatttcaagcgaaaatgcaactaccatcaatgtactggtactaagtagatttagttggtttggaattggtatgagagagattcacc  30016600                                                                                                   <-                                                                                                  ---                                                                                                 <---                                                                                                <----                                    ----------->HVH21                                           <----                            <---------AHL20(2)    <---------HSFB2a(1)                           -----                           <---------AHL20(2)     --------->HSFB2a(1)                           <----                        <---------AHL20(2)        --------->HSFC1(2)                            -----                        --------->AHL20(2)        <---------HSFC1(2)                     ============                    --------->AHL20(2)         <------ZmHOX2a(1)                 ------>NtERF2 <----- ----GT1            <---------AHL20(2)     ---------->DOF2               <---------ALFIN1------>ZmHOX2a(1) -----ALFIN1 ----------->HVH21    --------->ANAC55(2)                <-----------HVH21   ============   acttgccctctctacttgacatttatttttttatttatgtgacagaaaaggactcttccaacttggacttgtgtcacactcgatgcccatcctgtgagga  30016700          ----------->GT1          <---------ANAC46         --------->MYB59  <-----------HVH21 --------->TGA1a --------->ANAC46 --------->O2 <---------O2 --------->ANAC58 --------->ANAC58 ============================bZIP_DOF --------->bZIP60(2) --------ALFIN1 --->ZmHOX2a(2) ---ZmHOX2a(2) -------ARR10            <---------At4g35610 -----ARR11(3)           <------NtERF2 ---->ARR11(3)           --------->At4g35610 -----ARR14(2)          --------->RAP2.6(2)                                                     ----- ---->ARR14(2)         <---------RAP2.6(2)        --------->YAB1                           --------->DAG2 ====HOX2a_HOX2a    --------->DAG2                --------->TOE2(3)<---------ZAT6         ---------->DOF2 -ZmHOX2a(1)       ---------->DOF2           <-------TEIL   <---------YAB1        <----------DOF2---- ===HOX2a_HOX2a   ---------->DOF2   <---------ALFIN1     <---------YAB1    ------>ZmHOX2a(1) <-------   tccacgtcaattgggtaaacaaaaggccgcttaaggcccaacttgggtccatccataatatgatgaatagtgtcatcctctctggtttttggaaaaggaa  30016800  Previous    Next  AGI:  At1g79750.1    Description:  ATNADP-ME4 (NADP-MALIC ENZYME 4); malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor. similar to ATNADP-ME3 (NADP-MALIC ENZYME 3), malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor [Arabidopsis thaliana] (TAIR:AT5G25880.1); similar to ATNADP-ME2 (NADP-MALIC ENZYME 2), malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+)/ malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor [Arabidopsis thaliana] (TAIR:AT5G11670.1); similar to ATNADP-M Range:  from: 30012219    to: 30016286    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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