Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->TOE1(2)                                                                      ------->TEIL                                                                      -------->P                                   <---------ANAC58                <---------ATHB12              <---------REM1(1) ----------->HVH21           <---------WRKY18(1)           <-----------RAV1(1)--------->CCA1(2)           <---------WOX13(1)    --------->GLK1(1)   ------->PIF5            ----------->ARR10        >>>>>>>>>EIN3  --------->MYB46(3)   <-------PIF5  --------->ETT(2)  <---------ANAC58<-------TEIL  --------->WOX13(1) <---------LBD16 <---------ETT(2)  ----------->RAV1(2)  --------->ATHB12--------->TOE2(3) --------->YAB1   tagcacggggctattgttgtagacaaacttagatatgacctgcgcttgcgatatacattgattgacccaatcaaccttggagaattcttctaagatgatg  30010700                                                                                               <-----                                                                                               ------                                                                               --------->GLK1(2)                                                                          <---------At4g35610 <------                                --------->ATHB12                          --------->At4g35610 -------                         --------->ANAC58                              <---------ZAT14      ---------               <-----------RAV1(2)                                     --------->ZAT14      <--------            <-------TEIL --------->ANAC58                       --------->CCA1(2) <-----------RAV1(1)         --------->At4g35610    <---------MYB46(3)  --------->CCA1(2) --------->ALFIN1     --------->ICU4   ttcaaacactgagatgcacagggggagacgaaaatggttgcatagttttgcaagagatggtttgagataccagtgtagcagaagctgttgtccataatga  30010800                              ----------->HVH21                                        <---------ETT(2)                      --------->ARR14(2)                                               --------->ETT(2)                      <---------ARR11(3)                                              --------->ATERF1(1)                      <---------AHL20(1)                                              <------NtERF2                      <---------ARR14(2)                                             <---------ATERF1(1)                      --------->AHL20(1)                                            <---------ANAC58                      --------->ARR14(3)                                            <---------DEAR3(1)                      <---------ARR14(3)             --------->ANAC58               <---------ANAC58 ----ICU4             --------->ARR11(3)             --------->ANAC58               <---------ANAC46 --->ATHB12          <---------CCA1(2)         <------ZmHOX2a(2)                   <------NtERF2----- ---YAB1      ------>ZmHOX2a(1)               --------->ARR11(3)                  <---------ATERF1(1) -->ICU4      ----------->HVH21               <---------ARR11(3)                 <---------DEAR3(1) >YAB1      <---------At4g35610              <---------GLK1(1)                  <------ZmHOX2a(1) -ICU4      ----------->RAV1(2)         ---------->DOF2          --------->ARR11(3)--------->ATERF1(1)   tttgcacaatatgctcctgaccaatatcttggatgacagaatcaaagagatcagcaaggcattttgagttcttgaaatatgaggaggcgtcgacagactt  30010900                                                                                                    <                                                                                                 ----                ----------->GT1                                                                ------                <------MYB83                                                                 <-------                <------MYB46(1)                                                             ---------           <---------HSFB2a(2)                                 <-------TEIL                 <--------           --------->HSFB2a(2)                                 <---------WRKY38(1)       <---------DREB2C(2)          <---------LBD16                                   <---------DEAR3(2)           <---------DEAR3(1)        --------->GLK1(2)              <---------ICU4<-----------RAV1(1)            --------->ZAT14--       --------->ARR11(3)           --------->WOX13(1)     <---------DREB2C(2)--------->YAB1<--------       <---------GLK1(2)--------->CCA1(2)  <---------ZAT18 --------->ETT(1)  <---------YAB1<---------MYB52(1) ------>GT1<---------HSFC1(1)   ----------->GT1  --------->ATHB12      ---------->CDC5   <---------MYB46(3)   gtgaaaaaagattctggaaggtgaagagacggagaagttaatcagtgctcgtgatttgttgtcggtccatgcctcagcgatgatagtacagccggtggtg  30011000                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  ===      <----------DOF2                                                                             ---  <---------ALFIN1                                                                              <---- ------>MYB46(1)                                                                              ------- ------>MYB83                                                                                 <------ ---------ALFIN1                                                                             <------- ----->PCF2                                                                                <------ZmHOX2a(1) ----->HVH21                                                                             --------->LBD16 --MYB46(3)                  <---------At4g35610                                     --------->ARR14(2) >ALFIN1                    --------->ANAC58                                         <---------ARR14(2) -DEAR3(1)                  --------->ANAC58      <-----------HVH21               --------->MYB46(3) ------->MYB46(3)     <-------GAMYB--------->ARR11(3) --------->ANAC58          ----------->RAV1(1) -AtMYB61        <----------DOF2   <---------ARR11(3) --------->ANAC58      <------ZmHOX2a(1)--------   acccactccttttcagtgtctttcagttgtaagctaatatctgacttaaccctgtccagccattcagtcttgggagaaggagcaacaaatccaggaccac  30011100           --------->ATERF1(1)         <---------ANAC46         --------->DEAR3(1)         <---------DEAR3(1)       ------->GAMYB    --------->MYB52(1) ------>TGA1a -------TGA1a -------O2 <------NtERF2                         --------->ZAT14 ==============MYC_MYB                        ------->GAMYB ------>O2<-----------HVH21                ----------->RAV1(1) -----ALFIN1         ----------->GT1    ------>NtERF2              ---------->DOF2 -->AtMYB61--------->ALFIN1            --------->ZAT18 --------->WOX13(1)                      ------ ---ALFIN1------>NtERF2<---------YAB1--------->At4g35610         <---------------AGL15         ------ ----------AGL1    <-------MYC3      <---------At4g35610         <---------HSFB2a(2)      ------>ZmHOX2a(1) --------->AGL1    ------->MYC3   --------->ALFIN1   ------------>CBF        ----------->GT1   <-----   acttggcaacggcgtcgagcatatggtgataagagggtgagcgggcaacagcgaagtcaatcttgttctcaaagaagaagagagaaatactcctctctgc  30011200                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                           <---------ANAC46                                                                           --------->ALFIN1                                                                        --------->ALFIN1                                                                        <---------AtMYB61         <----------DOF2                                             <---------TOE2(3)    ------>ZmHOX2a(1)                                  --------->MYB52(1)<---------MYB46(3)  <---------ANAC58                                   --------->MYB46(3) <---------DEAR3(1)  <---------ANAC58         ---------->DOF2     <------ZmHOX2a(1)    --------->DAG2           <------MYB46(1) --->ZAT14                <------ZmHOX2a(1) <-----------RAV1(2)    ---------->DOF2           <------MYB83 ------>CBF      <------ZmHOX2a(1)        --------->ANAC58        --------->CCA1(2)        <--------P ----ZAT14    <------ZmHOX2a(1)           --------->ANAC58    <------ZmHOX2a(1)  <---------ANAC46   aatgtcctgcgcattaggaggagaactaggaaagactagtttggacgcaggagcatcaaacggaggagataaaggtggtggaggcttgtacttgttggta  30011300                     --------->AHL20(2)                  --------->At4g35610                              ------->MYC2                  <---------At4g35610                              <-------MYC2                  ----------->GT1       --------->ZAT6             ------->MYC3         <---------YAB1           --------->ZAT6                   <-------MYC3      <------ZmHOX2a(2)       <---------MYB52(2)           --------->TOE1(3)    <----------DOF2     --------->ARR11(3)       --------->ANAC58             --------->TOE2(3)    <---------DAG2     <---------ARR11(3)       --------->ANAC58        <---------MYB59     <-----------GT1           <   atggggggatcatccttggcagataaaatggaacgaactctatcagtaacatcgtccctaaccttggcacatggattaacccctttactgggaaggcgag  30011400                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                                  <--                                  <---------ARR11(3)                                              ---                               --------->YAB1                                                     <--                          <------NtERF2                                                       <------                         <---------RAP2.6(3)                                                  -------                        <---------ATERF1(2)                                                   -------                        --------->RAP2.6(2)                                                   <------                        --------->RAP2.3(3)                                                  --------                        --------->ATERF1(2)                                            <---------ARR14(2)                        --------->RAP2.3(2)                                            --------->ARR14(2)         ------------>CBF------>NtERF2                            <-----------GT1   <---------ANAC58     <---------YAB1    --------->RAP2.3(1)                   --------->TOE2(3)      <---------ANAC46< ---------At4g35610<---------ICU4 --------->ARR11(3)      <-----------GT1           <---------ANAC58-   agagatgatgcttcaatctactaatgccgccattaagaactctagagcaaaacttgcatttaaccttgttaccatctagtttctctgcgtattcccagca  30011500           <---------SPL7          --------->TOE1(1)          --------->TOE2(1)   <----------DOF2 --------RVE1(1) ------->RVE1(1) --------CCA1(1) --------GLK1(1) ------->GLK1(1)                                                 --------->AHL20(2) ------>ARR14(2)                                               ----------->GT1 -------ARR14(2)                                             ---------->DOF2 ------>ARR11(3)                                        --------->TOE1(2) -------ARR11(3)                                       --------->ATHB12                            <- ---ZAT2 <---------HSFB2a(2)                           --------->YAB1                <---------DAG2<- -->At4g35610            --------->ANAC46             <---------ATHB12               <----------DOF2 -->ZAT2 --------->HSFB2a(2)                    <---------At4g35610          --------->At4g35610   -- ---At4g35610  <---------ALFIN1      <XXXXXXXXXXXXXXXXXXXXMIR1886.2  <---------AHL20(2)     <-------- --->RAV1(1) --------->SPL7      --------->MYB46(3) --------->WOX13(1)<---------AHL20(2)  <----------DOF2 ---------ARR11(3)       --------->ANAC58       --------->At4g35610  --------->AHL20(2)<-----------GT1 -------->ARR11(3)       --------->ANAC58   <-----------GT1 <------ZmHOX2a(1)<---------At4g35610   <-   gatatctttttctcgtaccactgtctcacacaacaacaatcgaatttttcatctcaatcataggaaagaaaataaatagagctgctactttactttacat  30011600  Previous    Next  AGI:  At1g79740.1    Description:  hAT dimerisation domain-containing protein. similar to hAT dimerisation domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G17450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69358.1); contains InterPro domain Protein of unknown function DUF659 (InterPro:IPR007021); contains InterPro domain HAT dimerisation; (InterPro:IPR008906) Range:  from: 30009260    to: 30011122    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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