Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->ANAC55(2)                                                                                           <---------ANAC58                                                                                           <---------ANAC55(2)                                                                <---------GLK1(2)          <---------ANAC55(1)                                                         ------>ZmHOX2a(2)              <---------ARR14(2)                                                        --------->CCA1(2)           ------>MYB83                                                        <------ZmHOX2a(2)           ------>MYB46(1)                                                       --------->ARR11(3)          ----------->RAV1(1)                             --------->At4g35610       --------->AGP1          <-----------GT1    <--                 --------->ATERF1(1)                   <---------ARR11(3)   <---------MYB46(3)    <--           --------->DAG2    <---------At4g35610       <---------AGP1     <-------GAMYB --------->ARR14(2)          ---------->DOF2 <-------TEIL                --------->RVE1(1)  --------->MYB52(2)<---------ANAC58    --------->LBD16   --------->LBD16              ---------->DOF2     <---------MYB52(1) <-------TEIL   ctggtccgaagaaaaaggagtctccgagttcatcggaatccaatctaagaccaaaaagatctaacaaattcttgttagttgttaccaacatatacgtgtt  29998200                                             --------->At4g35610                        <---------ANAC58     <---------ZAT2               ------->TEIL                <---------ANAC58             <---------At4g35610          <---------ARR14(2)           --------->TOE1(3)                 --------->ZAT2               --------->ARR14(2)           --------->TOE2(3)   <---------ANAC46                           <---------ARR11(1)   <---------ETT(2)     <---------ANAC58   ===========================RAV<---------CCA1(2) --------->ZAT14--------->bZIP60(1)        <-----------RAV1(2)           <---------ARR14(1)         < --------->REM1(2)   <----------DOF2  <---------ANAC58        ---------->DOF2                     <-- -------ANAC55(1)    ------>ZmHOX2a(1)<---------ANAC58      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --- -------ANAC46  <---------ANAC58   <---------CCA1(2)      ----------->RAV1(1)                    <---   aagtgtagacaaaccttgacgtcctttcttggtctgtgtatcgttccagctgttcttatcccacaaatgcgcttcgtatctcccagtccatctatgccta  29998300                                  ---------->DOF2                             <---------------AGL15                             --------------->AGL15                            <---------ANAC55(2)                                          <-----------HVH21                            ----------------->AGL1                                --------->ANAC58---                            --------->ANAC55(2)                                   --------->bZIP60(1)                      --------->AHL20(2)                                          <---------bZIP60(1)                      --------->AHL20(1)                                          --------->ANAC58<--          --------->MYB52(1)----------------->AGL2                             ----------->HVH21  ---        --------->MYB46(3)  ----------------->AGL3                       --------->ARR11(3)       <-- ---------YAB1        <---------AHL20(2)                    <---------YAB1    <-----------HVH21  ---- ------HAHB4         <---------AHL20(2)                   --------->YAB1 <---------ARR11(3)      <--- ------>YAB1         --------->AHL20(2)             <---------TOE2(3)----------------------->TaNAC69(2) ------YAB1 --------->YAB1<-----------GT1     <---------ANAC46    <------ZmHOX2a(1)------>NtERF2 ----   ttattattcaacaatcggaacaattaaattacctgataaagaacgatgtcgtttatggtattatgagaggagagagaccttgtgacgcctctgtaagggg  29998400                                   <---------ANAC58                                   <---------ANAC58                            --------->DEAR3(1)                           --------->ORA47(2)                           --------->RAP2.3(1)                           --------->ATERF1(1)                           <------NtERF2                          <---------DEAR4(2)                          <---------ORA47(2)                          ------>NtERF2                          <---------RAP2.3(1)                          <---------ATERF1(1)                         <---------ANAC46                         <---------RAP2.3(2)                         <---------DEAR3(1)          --------->ALFIN1<---------ERF1   <-------GAMYB         <---------RAP2.3(3)  <---------ANAC46       <---------RAP2.6(2) <-------TEIL            --------->ATERF1(2) ------>ZAT2            --------->ATERF1(1) -------ZAT2<------ZmHOX2a(1)------>NtERF2 ------>At4g35610       <---------ABI4(1)<---------ANAC58                               <----------DOF2 -------At4g35610   <---------ANAC58     <---------ANAC58                      --------->DEAR3(1) ----->ARR14(2)     <---------ANAC58     <---------ANAC46                   --------->ANAC58 ------ARR14(2)<---------ANAC58    <---------ANAC46   <---------TOE2(3)     --------->ANAC58 ----->ALFIN1  <---------ANAC58   <---------TOE2(3)   <---------TOE1(3) <-----------RAV1(2)   agctgcgttgaagaggagcgtttcgaggcggcgacttacgtttgcgtttggatgttaaggcaatggacgcagactcagacgcagacgctgttttatcgct  29998500                     <---------ANAC58        <---------------AGL15                     <---------ANAC58       ----------------->AGL1                                  <         <---------DOF5.7(2)                =========================================================        <---------WRKY12                    ----------------->AG                                    -        <---------WRKY38(1)            <----------DOF2     --------->YAB1                          --        <---------WRKY45         --------->LBD16  <---------LBD16                       <------------       --------->DOF5.7(2)      <---------HSFB2a(2)  --------->At5g28300                --------->LBD16      --------->TOE2(3)         --------->HSFB2a(2) --------->LBD16                     ------>ZmHOX2a(1)      <-----------HVH21      ------>ZmHOX2a(1)   --------->MYB52(1)  ---------->DOF2<---------ARR14(2)   gatttcatcgtcaacgattgttttcttgctcctcccagagacttttgccattaccggtgaatgagaagaataaaagattgagagacaatcctgaaaatgg  29998600                                                                                         <-----------TBP                                                                                         --------->AHL20(2)                                                                                         <---------AHL20(2)                                                                                       <-----------TBP                                                                                       <---------AHL20(2)                                                                                     <-----------TBP                                                                                     <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                                   <---------AHL20(2)                                                                                   <-----------TBP                                                                                 <---------AHL20(2)                                                                                 <-----------TBP                                                       <-----------HVH21         --------->AHL20(2)                                                      --------->ANAC55(2)      <-----------TBP   --------->YAB1                                     --------->ANAC46         <---------AHL20(2)  <---------YAB1                                 <---------AHL20(2)          <-----------TBP       -- ---------ICU4                             <---------AHL20(2)              --------->AHL20(2)   ----- ===MADS_MADS                              --------->AHL20(2)          <---------ANAC46--------->AHL20(2) -------->YAB1                           <-----------TBP       <----------DOF2 --------->AHL20(2)<<<< ------->ICU4                      <---------ANAC46   <---------ANAC55(2)  <-----------TBP <---------AHL20(2) ---AGL15        *TSS         --------->ATHB12  --------->AHL20(2)    ---------->ID1 --------->AHL20(2)   aattatgaaaatgagagacagatagttggaaatggttgagtatatttatattaaatccgtcacatcttttttttcgtttatatatatatatatatatatg  29998700                                                       <---------------AtSPL3                                               <---------ARR11(3)                                               --------->ARR11(3)                                               --------->AHL20(1)                                   <                                               <---------AHL20(1)                               <----                                        <---------At4g35610               --------->DAG2        -----                                        --------->At4g35610      --------->YAB1                ------                                  --------->GLK1(2)    <---------------AtSPL8              <---------ZAT18          ------------>CBF       <---------GLK1(2)<---------AHL20(2)     ---------->DOF2   --------->ZAT18 ------->AHL20(2)       --------->AHL20(2)--------->RAP2.6(2)--------->ICU4        <---------TOE2(3)- ------>GT1    <---------AHL20(2)--------->ARR14(2) <---------AHL20(2)--------->YAB1 --------->ARR11(3) <<<<<MYB98    --------->AHL20(2)<---------ARR14(2)--------->AHL20(2)<---------YAB1<---------YAB1  --   ttaaaattttagaacaattttttggtttaaatacagattctcagccgaatattttaaattgtactgatcatatgataaagtcactaagattatggcacta  29998800                         <---------AHL20(2)           --------->ZAT18                         --------->AHL20(2)           --------->ZAT14 ---------ARR11(3)    --------->ARR11(3)              <---------ZAT14 -----ICU4      <---------AHL20(2)          ------->GAMYB      <---------ANAC55(2) ---->YAB1     --------->AHL20(2)         <---------At5g28300  --------->ANAC55(2)  --------->ARR14(2) --->ICU4 <---------AHL20(2)   <---------LBD16 --------->REM1(2)                    <---------ARR14(2) -------->ARR11(3)    <---------ARR11(3) <-----------GT1   <-----------HVH21    <-------TEIL        < ------->YAB1  <---------AHL20(2)--------->LBD16      <---------ZAT18--------->TOE2(3)             <-   attatcttgtatttttttttaatagattttatttccggtgatataaccgtgtctagtccactgtcacgttttcttaattagattcatatatgctaccatt  29998900                                 <---------ALFIN1                  ------->TEIL                              --------->ANAC46                    <-----------GT1                            <-----------GT1      <---------------AGL15                          --------->AHL20(2)     --------------->AGL15                      ---------                         <---------YAB1    <---------ICU4      <---------TOE2(3)            ---------    <----------DOF2    <---------ICU4      <---------GLK1(2)   --------------->AtSPL8   --------->ZAT6    <---------DAG2    <---------YAB1     <---------TOE2(3)   <---------AHL20(2)        <---------YAB1 ---------ZAT18       --------->ICU4 <-------GAMYB     --------->YAB1                <---------ICU4 ----------GT1    <---------WOX13(1) --------->At5g28300     --------->AHL20(2)     --------->ICU4---   tttgcacttttcttagtcagattgattattaaacaccacggttaagaatttctcaaatcagaattaatgaaccattttctaaattgattatgactagcaa  29999000        <---------ARR11(3)        <---------ARR11(1)       <---------CCA1(2)    <-------TEIL--------->ATHB51   <------ZmHOX2a(2)  --------->ARR11(3)  <---------ARR11(3)  --------->ARR14(2)  <---------ARR14(2)                                ------>MYB83  --------->AGP1-------->ATHB1--------->At4g35610   ------>MYB46(1)       <---------ANAC58          < >ANAC58--------->ARR14(2) <---------At4g35610    --------->TOE2(3)       <---------ANAC58         <- >ANAC58<---------ARR14(2)<-----------GT1       ------->TEIL---------->DOF2                  <------- ------->DOF2  <---------YAB1 <---------At4g35610 <---------MYB59  --------->AHL20(2)    <-----------GT1   aaaagatccatatctgtattattgtttttatctgctcatttttgtcgaagaacctaattagccaaagaaaaaaatggagtgcctcaagttttatcgattc  29999100  Previous    Next  AGI:  At1g79700.1    Description:  ovule development protein, putative. Identical to AP2-like ethylene-responsive transcription factor At1g79700 [Arabidopsis Thaliana] (GB:A0JPZ8;GB:Q70II2;GB:Q8GYZ5;GB:Q9CA81;GB:Q9MA06); similar to ovule development protein, putative [Arabidopsis thaliana] (TAIR:AT1G16060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66605.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 29995229    to: 29998617    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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