Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    ------>MYB46(1)         --------->ZAT14                                                        --------->AtMYB61         --------->ZAT18                                                     <-----------GT1         <---------ZAT14                                                     <---------ALFIN1       ------->MYC3                    --------->ZAT6                       <-------TEIL     <-------MYC3                   <------ZmHOX2a(1)                      --------->CCA1(2)     ------->MYC3                 <---------ANAC55(2)                     --------->ARR14(2)       --    <---------TGA1a               <---------TOE2(3)                     --------->ANAC58   <---------GLK1(1)    --------->TGA1a          --------->ATHB12                           --------->ANAC58   --------->GLK1(1) -----DOF2                   --------->YAB1               <---------LBD16 <---------ARR14(2)       -- ->ID1 <-------MYC3         --------->ICU4              --------->GLK1(2) <---------ARR11(3)   ------ --->AtSPL8                <---------WOX13(1) ---------->DOF2    --------->ATHB12 ------>MYB83 <-----   tttcacacatgtgtacagaaacacgagtgaatgattaaggaacactcacaaagcagtgattctggagttattgcaagatacaccttcccaaggagttcca  29966800                                                                     ------>NtERF2                                                                     <---------At4g35610                                                                    --------->RRTF1(3)                                                                    --------->DEAR3(1)                                                                    --------->RAP2.3(2)                                                                    --------->RAP2.6(2)                             <---------ANAC58                      --------->RAP2.3(1)                             <---------ANAC46                      --------->ATERF1(1)                             <---------ANAC58                      --------->RRTF1(1)                            <------NtERF2                          <------NtERF2                           <---------DEAR4(2)                     <---------ATERF1(1)             --------->AtMYB61                                    <---------RAP2.3(1)            --------->HSFB2a(1)                                   <---------DEAR4(2)            <---------HSFB2a(1)                                  --------->RAP2.6(2)            <---------HSFC1(2)                                   <---------DEAR3(1)            --------->HSFC1(2)                                   --------->DEAR3(1)          --------->ARR14(2)--------->RAP2.3(1)                  --------->RAP2.3(2)          <---------GLK1(2)<---------RAP2.3(1)                  --------->ERF1          <---------ARR14(2)--------->ATERF1(1)                 --------->ATERF1(1)       --------->YAB1      <---------ERF1                       --------->RRTF1(1)      --------->At4g35610  <---------ORA47(2)                   --------->DEAR3(2)    --------->YAB1         ------>NtERF2                        --------->RAP2.3(1)   <------ZmHOX2a(2)      <---------DEAR3(1)                  <---------ARR14(2)  <---------ARR11(3)      <---------RAP2.3(3)                 --------->ARR14(2)           --------->ANAC58  --------->ARR11(3)      <---------RAP2.3(2)               ----------->ARR10 --------->DAG2 --------->YAB1           <---------RAP2.6(2)  --------->WOX13(1)--------->RAP2.3(3)       --------->ANAC58 ------->ANAC58  --------->LBD16    ---------->ID1       --------->ANAC58   ---------->DOF2---------- ------->ANAC58 --------->ANAC46--------->ARR14(2)       --------->ANAC58  <---------AHL20(2)-------- --->HSFB2a(2) ------>MYB83<---------ATERF1(1)------>ZmHOX2a(2)<---------ATERF1(1)----------->RAV1(1) ----HSFB2a(2) ------>MYB46(1)  <---------ARR14(2) ---------->DOF2------>NtERF2  <----------ID1   <--   caaggatcatcagaacctccccaactaggcggcgtattgtcccattgatccatcaaagaacgcagagccgccgctaataaaaggcaacaaaacaagtaaa  29966900            --------->ANAC58            --------->ANAC58            <---------MYB52(2)    --------->YAB1                                                                <---------ATHB12    <---------ICU4            ----------->GT1                                     --------->ICU4    --------->ATHB12     --------->ANAC58                            <-----------HVH21    <--------HAHB4       --------->ANAC46                           --------->WOX13(1)   <---------ATHB12      --------->ANAC58                         <------ZmHOX2a(2)-------->ATHB1 ->GT1      --------->ANAC46 --------->ANAC58                    --------->ARR14(2)<---------ICU4 ->AHL20(2)--------->LBD16------->GAMYB                          <---------ARR14(2)--------->ATHB12 ---------GT1  ------->TEIL  --------->ANAC58                   <------ZmHOX2a(1) <---------YAB1-----   ttacaatcatttccacgaacgtattcaacgcaaggaaaaaacataagtcatcacataccatcacgaggatcagtcactgatgaaatcattgagaagacag  29967000                                            <---------At5g28300                                          --------->ARR14(2)                                          ----------->HVH21                                          <---------ARR14(2)                                        <---------MYB46(3) ------>MYB83                              --------->LBD16              ------>MYB46(1)                             ------->GAMYB<---------MYB52(1)                            --------->MYB46(3)            --------->ANAC46                  <------ZmHOX2a(2)    <---------ANAC46 --------->DEAR3(2)                 --------->ARR11(3)  ------------>AtMYB77--------->MYB46(3)       --------->ANAC58     <------------AtMYB77--------->ALFIN1       --------->ANAC58    -------->P------------>MYB.PH3(1)                          --------->ARR11(3) ---->At5g28300  --------->AGP1   <---------REM1(1)    --------->PCF2   ------>ZmHOX2a(1)<---------HSFB2a(2)   tgaatgagtaagcaaaacagatcaagagcaaccgcgatgtagcggttacggtgttggaacccaccatattgttcctcaagagacatgagttcttgaagtt  29967100                                                      <----------ID1                                                 ------>ZmHOX2a(1)                                               ----------------->AGL1                                            <---------ANAC58                                       <-                                            <---------ANAC58       --------->ATHB51               *TSS                                           --------->At4g35610     <---------ICU4         --------->ZAT18                                           --------->HSFC1(2)     <---------YAB1          --------->ZAT14                     ---------->DOF2       <---------HSFC1(2)   --------->YAB1            <---------ZAT14              --------->YAB1          <---------TOE2(3)        <-------TEIL             <------------    <---------AHL20(2)               ---------->DOF2<---------YAB1--------->ICU4   --------->AHL20(2)   tgatatttaagtgaaatcatagagaaagaagaaacagattaaagtagcttccttatgagacaagattcataattgtctcatcaaaaaaaatgtgtactga  29967200                                          ------------>CBF                                      <------MYB83                                      <------MYB46(1)                                 --------->DAG2                                ---------->DOF2     <-----------GT1                             --------->ANAC58 ------------>CBF                   <-------TEIL            <------ZmHOX2a(1)--------->ANAC58 <---------ATHB12             <-----------GT1     ------------>CBF----------->HVH21<---------MYB46(3)                   --------->MYB52(1) -----------CBF     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                --------->AHL20(2)       --- ---AtSPL8--------->YAB1<---------bZIP60(1) --------->WOX13(1)      ------------>CBF      <----------DOF2   gaattgtgccaataggaacacgagtgacaccaagaaaagttggtttcaatcaattttccttctcttcgaagtcaatttaacggttcatgtgtcttttttt  29967300                                                      --------->AHL20(2)                                      <---------------AGL15                                      --------------->AGL15                                     ----------------->AGL3                                      <---                                     ----------------->AGL1                                      ----                                --------->REM1(1)     <---------ICU4                             <---                         <---------ANAC46            <---------AHL20(2)              --------->ICU4                         <---------ANAC58            --------->AHL20(2)             <---------TOE2(3)               ---------->DOF2<-----------GT1  ----------->GT1                    --------->AHL20(2)     <----------DOF2     <---------ANAC58     <------ZmHOX2a(1)                   <---------AHL20(2) ------->DOF2<---------YAB1<---------ZAT6    ----------->GT1<----------DOF2      --------->AHL20(2)   caaagcactttagttattaaagcacttgagtgttacatctccaaataaggagaaaataatttctttcaaatagccactacaaaattaatgatgtaaactt  29967400                                                  <---------At4g35610                                                 <---------YAB1                                               <---------ICU4                                              --------->ICU4                                 <---------HSFC1(2)                                 --------->HSFB2a(1)                                 <---------HSFB2a(1)       ---------->DOF2           --------->HSFC1(2)      <---------MYB52(1)        -------->P    <---------YAB1     <-------GAMYB          --------->ANAC58<---------ICU4  <---------At5g28300       --------->ANAC58--------->YAB1  <---------DOF5.7(2)       --------->ANAC46<--------HAHB4 ------TOE2(3)            ---------->DOF2  <---------YAB1 ----->MYB59             --------->YAB1  --------->YAB1                      <---------PCF2 --------- ------TOE2(2)  <---------MYB52(1)    <----------DOF2               --------->GLK1(2)      ----------   aggttaccgttaagctctgttttgtaatcaaagcaaccttctttgatcattatgctgagaatagacagagaatatagtggaacccataaaaaaaaaagtt  29967500                                              ---------->DOF2                                           --------->TOE2(3)                                          ----------->GT1                                      <---------AHL20(2)                                     --------->YAB1                                     --------->AHL20(2)           --------->AtMYB61         <---------AHL20(2)           ------->GAMYB          <---------ICU4          --------->MYB46(3)     --------->AHL20(2)          <---------ATHB12       <---------AHL20(2)         ------>MYB83            <---------ATHB51                                                  <-         ------>MYB46(1)         --------->ICU4                                                <-----         -------->P           --------->AHL20(2)--------->ANAC58                            ---------     --------->ANAC46        --------->AHL20(2) --------->ANAC46                         --------->YAB1 >DAG2  ------>MYB46(1)      <---------AHL20(2) --------->ANAC58                      --------->YAB1< >DOF2  ------>MYB83       --------->YAB1 <---------ANAC55(2)                      ----------->GT1 --   cccaaaaacccaaccatctccaaaaacaaaaataaataattaaaacgtaaaagccacttccttcaatttccaagtgtctaacatgtagtaataagagtta  29967600                                --------->CCA1(2)                                <------ZmHOX2a(2)                               --------->AGP1                               <---------ARR11(3)                               <---------ARR14(2)                               <---------TGA1a                               --------->ARR11(3)                               --------->O2                               --------->ARR14(2)           <---------MYB52(2)  ===================bZIP_DOF                           ---------->DOF2       <----------DOF2             ----------->HVH21      ---------->DOF2   --------->ANAC58         =========================================bZIP_DOF --------AHL20(2)       --------->ANAC58        ------>ZmHOX2a(2)       ------>MYB83 ----AHL20(2)           --------->ANAC46      --------->ARR11(3)        ------>MYB46(1) ---------->DOF2 -->GT1              ----------------->AGL3   <---------ARR11(3)--------->YAB1  ===================bZIP_DOF ---------AHL20(2) --------->ARR14(2)        --------->YAB1--------->At4g35610  <---------O2       -- ------->AHL20(2)  <---------ARR14(2)       <---------YAB1 <---------At4g35610  --------->TGA1a    <-   attaaatataaagacagagagtatccaagaaaagatccaattcactatgatctttatctacagctaacatgaccaatctctcacatgtctgaaagactaa  29967700  Previous    Next  AGI:  At1g79620.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G49770.1); similar to ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G49780.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G49760.1); similar to hypothetical protein OsJ_010276 [Oryza sativa (japonica cultivar-group)] (GB:EAZ26793.1); similar to Protein kinase domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95747.1); similar to unnamed protein Range:  from: 29962455    to: 29967198    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g79630.1    Description:  protein phosphatase 2C family protein / PP2C family protein. similar to protein phosphatase 2C family protein / PP2C family protein [Arabidopsis thaliana] (TAIR:AT1G16220.1); similar to Os08g0500300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062155.1); similar to protein phosphatase 2c [Medicago sativa] (GB:AAV73837.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045) Range:  from: 29967623    to: 29970353    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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