Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <------ZmHOX2a(2)                                                                    <-----------HVH21                       --------->TOE2(3)                           ------->GAMYB                       --------->TOE1(3)                        --------->MYB52(1)                       <---------DAG2                         <---------MYB52(2)                     ------->TEIL                  --------->ZAT18--------->MYB46(3)                   ------->GAMYB               --------->ARR11(3)------>MYB83                  --------->MYB46(3)           <---------ARR11(3)------>MYB46(1)                  <---------MYB52(2)        <---------HSFB2a(2)--------->DEAR3(1)                ----               <---------WRKY12       --------->LBD16         --------->MYB46(3)                 ----          --------->DAG2             <---------ANAC46      --------->MYB46(3)                    ----         ---------->DOF2   <---------YAB1   --------->HSFB2a(2)--------->AtMYB61     --------->LBD16   aactgatgagaaaaagttcaacgaaccttatgctagtctccgtgttcgagatgttcgctaaaccaccaacgatcagccctacaattccacaaatttcaca  29961700                                       --------->ANAC58                                       --------->ANAC58                                       ======================HOX2a_HOX2a                                       ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                                      =======================HOX2a_HOX2a                                 =============HOX2a_HOX2a                                 <------ZmHOX2a(1)     ----------->GT1                --------->ANAC58 ----->ANAC46                 --------->DAG2          <------ZmHOX2a(1)      --------->YAB1 ----->ANAC58                ---------->DOF2   ---------->DOF2            --------->WOX13(1)     <--- ----->ANAC58             <----------ID1    --------->AtLEC2     <----------ID1       --------->ANAC58   aggaatcaaacaaaacaatcgatggaaaacgaaaaggacgatcgcaatgcaaaggaggagtaagaagaagacaaaccaattagaagagaagcactagctt  29961800                                                                                                   <-                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                            <------NtERF2                                                                                           <---------RAP2.3(1)                                                                                           ------>NtERF2                                                                                           <---------DEAR3(2)                                                                                          <---------RAP2.3(2)                                                                       --------->ANAC58   <---------DEAR3(1)                                                                   ------>ZmHOX2a(2)     --------->ATERF1(1)                                                                  --------->At4g35610   <---------ATERF1(1)                                 <---------WRKY18(1)             --------->ARR11(3)     --------->LBD16                                ----------->HVH21              <---------YAB1           <---------RAP2.3(1)                      <------NtERF2                          <---------ICU4       ------>NtERF2    <-                     ------>NtERF2                        --------->YAB1          <---------ALFIN1 --                    <---------ANAC46                    --------->ANAC58     <---------ARR14(2)   <--                    <---------RAP2.3(3)                 --------->ANAC58XXXXXXXXXXXXXXXXXXXX>MIR3933  <-------TEIL      <---------DEAR3(1)              ======================HOX2a_HOX2a   ------>NtERF2  ----------->GT1  --------->RAP2.6(3)              <------ZmHOX2a(1)  --------->ANAC58<---------DEAR3(1) <--------P   --------->ICU4<------ZmHOX2a(1)      <----------ID1<---------ARR11(3)   <---------LBD16 --------RAV1(2) ----------->HVH21          ---------->DOF2  --------->YAB1  --------->ARR14(2) <----   caggtagataatagaacttatgacggcgaaggacatgaccgagtacaaaagagaggacaagcatcatgatctgaagcaaaatcccgactccggcggcttg  29961900                                                       ------>NtERF2                                                --------->ARR14(2)                                   --------->RAP2.3(1) ----------->RAV1(1)                                 --------->DEAR3(1)   <---------ETT(2)                                 <---------DEAR3(1)   --------->ANAC58                                 --------->ATERF1(2)  --------->ANAC46                       <---------ANAC58        <---------At4g35610                       <---------ANAC46        <---------ZAT2                       <---------ANAC58 --------->ARR14(2)    <---------ANAC55(2)  <---------At4g35610  ----------->GT1  <---------ARR14(2)    --------->ANAC58 --------At4g35610   <---------ARR14(2)<---------GLK1(1)      --------->ANAC58 --ANAC58          --------->LBD16 <------NtERF2<---------ARR14(2) --ANAC46  <---------WRKY18(1)   <---------ATERF1(2)------>NtERF2 --ANAC58 ----------->HVH21     --------->ATERF1(1)--------->DEAR3(1) --------ZAT2     <---------ANAC46------>NtERF2--------->ZAT2 --------->ANAC46 ------->At4g35610<---------ANAC58--------->LBD16  ----------->HVH21        <---------AHL20(2) ---------RAV1(1) <---------ANAC58<---------ATERF1(1) --------->ANAC58      --------->AHL20(2) -----At4g35610  <---------LBD16<---------LBD16--------->At4g35610 ----------->HVH21      <---------TOE2(3)   ctgctgcttctcttgaccttgcgggtcgtgaatcgccggcgaaatctgcagctccgacgacattacgcctcgacggatttaaaaaaaaaactagggtttc  29962000                                                       --------->MYB52(1)                                                    --------->ANAC46                                                    --------->ANAC58                         <-------                                                    --------->ANAC58                <<<<<<<<<TBF1             ---------->ID1  <---------ZAT18        --------->ANAC55(2)           *TSS <<<<<<<<<TBF1   <---------ZAT6       <----------DOF2           <-----------GT1                <<<<<<<<<TBF1    ---   tatcagtgttacttcgtcttcttcgtctttgttcacacagagagagagaaattcacgaaacgggaactcgtgagatagacttcttcttcttcttcctttc  29962100                                                         <---------ANAC58                                                         <---------ANAC58                                                        ----------------->AG                                                        <-----------------AGL2                                                        <-----------------AGL1                                                     <----------DOF2                        --------->ARR14(2)           <---------GLK1(1)                        <---------ARR14(2)          <---------ANAC58                <---------YAB1                      <---------ANAC58               <-----------TBP                 =================bZIP_DOF             <---------DAG2                    <---------O2             --------------->AGL15             --------->O2<---------MYB52(1)             <----------DOF2    --------->PCF2 <---------ZAT2             <---------------AGL15             --------->ZAT2            <---------ANAC58 <---------ANAC58  =================bZIP_DOF            ==============================================================MADS_MADS            <-----------------AGL3 <---------ALFIN1<------NtERF2            <---------ANAC58 <---------ANAC58  --------->TGA1a   --------->ANAC58     --------->GLK1(2)      <---------TGA1a                    --------->AHL20(2)   --------->ANAC58    <---------GLK1(2)       <---------At4g35610                <---------ICU4 <------ZmHOX2a(1)    <------ZmHOX2a(1)        --------->At4g35610           <---------MYB59       <- ---DOF2  <-----------GT1<---------HSFB2a(1) <-----------RAV1(2)    <-----------TBP       --------->MYB46(3) ------>LBD16============================================bZIP_DOF  <----------DOF2--------->YAB1<----   cgaggacgcattttgctttttataggaatctgcgtccccactgcttctcaggtggctttccgttttgggcttttatgggcctaataatatcaactactct  29962200                                                                                                   <-                                                                                               ------                                                                                          --------->ANAC46                                                                                  ----------->GT1 <--   <---------ANAC58                                                          <------NtERF2--------->ANAC58   <---------ANAC58                                                      <---------MYB46(3)    <----- <---------AHL20(2)                                                     <---------AtMYB61 --------->ANAC58 <-----------GT1                                                        --------->ALFIN1<-----------GT1 --------WOX13(1)  --------->YAB1                       <---------ARR14(2)   ----------------------->TaNAC69(2) -----YAB1    <---------ATHB12                          --------->ARR14(2)  <---------MYB46(3) <-----   gatttacttgagcccaattactaataaacacgattactaaaaacatgggctaaatgtgtatatgtccagtggcagtggtggctcatgttaatacgctacc  29962300                      --------->O2                      <---------O2                      <---------ANAC46                      <---------ANAC58                      <---------ANAC58            --------->DAG2                            <---------AHL20(2)          ---------->DOF2                             --------->AHL20(2)        <----------DOF2     --------->At4g35610                             --------->AHL20(2)   <---------ARR11(3)     <---------At4g35610                             <---------AHL20(2)   <---------GLK1(2) ---------DOF2        <---------bZIP60(2)            <---------AHL20(1)   --------->ARR11(3)     <--- ----------->AGL1    ----------->STF1                --------->AHL20(1) <---------TOE2(3)   <-------- -------MYB52(1)    <---------TGA2(2)    <-----------GT1                ----------->ARR10 --------->YAB1 ------------AGL2  ----------->TGA1     <---------ZAT14           <---------MYB111(1)     <---------- ------------AGL1  ----------->HVH21    --------->ZAT14           --------->MYB46(3)   <---------ICU4   gtttttgggctgaaaaggcaaatgacgtctatacatggacagtttacagttctaatttatttggcccaactactaagattttcttttagtaatcacgatt  29962400                                                                                     --------->DAG2                              <---------WRKY38(1)                                   ---------->DOF2                              <---------WRKY12                               --------->YAB1<--------- --------GT1                 --------->WRKY18(1)                <---------DAG2 <---------------AGL15 -YAB1                   <-----------RAV1(2)                    <----------DOF2--------->AtLEC2 -GT1          <---------ALFIN1   --------->YAB1          <---------ICU4<---------ATHB12 --------->MYB52(1)   tactaatgggcctagcctcacagtgtttcaggtcaacaatactcgcacaagttttcatcaatatgacttttccattcattcatacaaaaagtaacgacaa  29962500                                                                                    <---------ALFIN1                                                                  --------->YAB1  ------>NtERF2                                                                 <---------YAB1  --------->DEAR3(1)                                                            <---------ALFIN1   <---------ATERF1(1)                         <---------ANAC58                   --------->AtMYB61  ------>NtERF2                         <---------ANAC58                 ------>NtERF2  --------->ANAC58                       <-----------GT1                   --------->RAP2.6(2)  --------->DEAR3(1)                       <---------AHL20(2)                --------->ANAC46--------->ANAC58   <--------                    <---------ICU4         --------->ETT(1)--------->MYB46(3) <---------ALFIN1     <- -ID1       --------->ARR11(3)         <---------AtMYB61--------->MYB46(3)  <---------ATERF1(1)    <-   ataatctcacaagagatgttgatatttacttgggctcaattttggtcggaacagagtagccaccactataatcaaacgctccgcctccatctccgtctct  29962600  Previous    Next  AGI:  At1g79610.1    Description:  sodium proton exchanger, putative (NHX6). Identical to Sodium/hydrogen exchanger 6 (NHX6) [Arabidopsis Thaliana] (GB:Q8RWU6;GB:Q8S395;GB:Q9MA14); similar to ATNHX5/NHX5 (NA+/H+ ANTIPORTER 5), sodium ion transmembrane transporter/ sodium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT1G54370.1); similar to Na+/H+ antiporter [Populus tomentosa] (GB:AAX37333.1); similar to Na+/H+ antiporter [Mesembryanthemum crystallinum] (GB:CAO01506.1); similar to Na+/H+ antiporter, isoform 2 [Solanum lycopersicum] (GB:CAC83608.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153); contains InterPro domain Sodium/hydrogen exchanger Range:  from: 29957766    to: 29962082    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g79620.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G49770.1); similar to ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G49780.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G49760.1); similar to hypothetical protein OsJ_010276 [Oryza sativa (japonica cultivar-group)] (GB:EAZ26793.1); similar to Protein kinase domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF95747.1); similar to unnamed protein Range:  from: 29962455    to: 29967198    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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