AthaMap

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Position

Exon region

Intron region

UTR region

AGI

% Restriction to highly conserved TF binding sites (0-100)

1 10 20 30 40 50 60 70 80 90 100
--------->ANAC58 --------->AtLEC2 ----------->GT1 --------->ANAC58 --------->YAB1 --------->REM1(1) <-- <---------ATHB12 --------->ARR11(3) <-------- --------->MYB46(3)--------->ARR11(3) <---------ARR11(3) --------->ANAC46 ---------->RAV1(1) --------->WOX13(1) <---------CCA1(2) ---------->DOF2 --------->ANAC58 -->ANAC46 --------->MYB52(1)------->TEIL --------->YAB1 ------>ZmHOX2a(1) --------->ANAC58
aacaccagaaaatcaaccgatagagtcaatgaacatattgaaaaacaagaatactatatctacatcctaacatgcaaagagactcttcttatacgcatgg	29930900
----------->RAV1(1) <---------TGA1a --------- --------->ANAC46 <---------ANAC46 --------->YAB1 --------->ANAC58 --------->ZAT14 <---------YAB1 --------->ANAC58 --------->ANAC58 <---------GLK1(1)-- --------->LBD16 <---------ALFIN1 ========================bZIP_DOF --------->GLK1(1)<- <---------LBD16 <------ZmHOX2a(2) <-----------GT1 <---------ZAT14 <---------ARR11(3)-- -------GLK1(1) --------->At4g35610 <---------ICU4 --------->ANAC58 --------->ARR11(3)<- -AtLEC2 <------ZmHOX2a(2)<---------ALFIN1 ---------->DOF2 --------->CCA1(2)-------
ctctccggataaacagatcagatcaaaattcccacaccaaaattacaacagataagcaagtagtgaagtgagaactgagataagatatcataccaagtga	29931000
<------ZmHOX2a(2) <-----------HVH21 <---------ARR11(3) ------>ZmHOX2a(1) --------->AGP1 --------->GLK1(2) -------->P <---------ARR14(2) >O2 --------->MYB46(3) --------->ANAC58 ------->At4g35610 <---------ATHB12 <------NtERF2 --------->bZIP60(1) --------ZAT14 <---------ARR14(2) --------->At4g35610 ------->ZAT14 --------->ARR14(2) <---------MYB46(3) --------->ARR14(2) <---------YAB1 --------At4g35610 <-------TEIL <---------AtMYB61 --------->ANAC58 <---------ZAT6 ---->HVH21 ------->GAMYB --------->MYB46(3)<---------ANAC46 ------->TEIL <---------YAB1 -----
ctgcagagaacaaccctagatccattacccatcaagtacttgatggtgggaacagcggcacgaatcctggtgtcatcggtgatgttagagttatcatcca	29931100
------>ZmHOX2a(2) <------ZmHOX2a(2) --------->ARR14(1) --------->CCA1(2) --------->ARR14(2) --------->ANAC58 --------->AGP1 --------->ANAC58 <---------ARR14(2) ------->GAMYB <---------GLK1(2) <xxxxxxxxxxxxxxxxxxxx smallRNA(se3) -------->P <---------At4g35610 <---------ARR11(3) ----------->ARR10 <------NtERF2 --------->ARR11(3) <-----------HVH21 ---------->DOF2 ------>NtERF2 ----->DOF2 <------ZmHOX2a(2) <----------DOF2 --------->At4g35610 ---------->ID1
aaggaacgttgagatcaaccctcacgaacacactctttcccttcagatccgcttccttcaaagttccaacgcttctcttcgtcgccatagttgattcttc	29931200
--------- <-------- --------->ARR11(3) ------->GAMYB --------->AGP1 --------->AtMYB61 ------>ZmHOX2a(2) -------->P --------->ARR14(2) --------->GLK1(1) <---------ARR14(2) --------->ANAC46 <---------LBD16 ----------->GT1 <-------- <-------TEIL --------->MYB52(1)<---------ARR14(2) --------- --------->ANAC46 <---------WOX13(1) ------>MYB83 <---------ARR11(3) --------->ANAC58 <---------YAB1 --------->WOX13(1) <---------AGP1 --------->ANAC58 --------->LBD16 <---------ANAC46 --------->ARR14(2) <---------GLK1(2) --------->ZAT14 <---------ALFIN1 ----------->HVH21 ------>MYB46(1)<------ZmHOX2a(2)
gtaaaacaaactaaaaacactgcaaacaacaagatgcacaccgcgagttcagattgacggagaaatcaaccaaatcggtgaaacagatctagagaatcta	29931300
*TSS --- --------->At4g35610 <-- --------->ARR14(2) --------->HSFB2a(1) --------->TOE2(3) <---------ARR14(2) ----------->GT1 --------->ANAC58 >GLK1(2) --------->GLK1(2) <---------MYB46(3) --------->ANAC58 -ARR14(2) <---------GLK1(2) <---------AtMYB61 ------>ZmHOX2a(2)<-- ---ARR10 --------->YAB1 --------->ATHB12 <---------YAB1 <---- >ARR14(2) --------->MYB52(1) <---------KAN4(2) --------->AHL20(2)<---------TOE1(2)
gctcaaaacttaatcgaagaaaacaatcggaatctgaagaaagaatatacttacatgagtggttgaaatgaaatacaagatgatcgaacgttacagaggc	29931400
<---------HSFC1(1) --------->HSFB2a(2) --------->HSFC1(1) <---------HSFB2a(1) ------>ZmHOX2a(2) <---------ARR11(3) --------->ANAC46 <------MYB83 <----------DOF2 <---------ANAC46 --------->ANAC58 <------MYB46(1) <---------HSFB2a(2) --------->At4g35610 <-- <--------P ------->TEIL --------->ZAT2 --------->ANAC58 ---------->DOF2 --------->ARR11(3) ---------->DOF2 --------->ANAC58 <-- -------->GT1 <---------ARR14(2) <---------AHL20(2) --------->ANAC58 --- ----MYB46(1) --------->ARR14(2) ------>ZmHOX2a(1) ------->GAMYB <--- ----MYB83 <---------MYB46(3) --------->TOE2(3) <---------ALFIN1 <--- -----ANAC46 <---------AGP1 <---------ARR11(3) <---------ZAT2 --------->ANAC46
tggtataaagagttggtgaatggatctttcgagaagcgagagaacaatatcccttccttatataaaagcagcttggacaacaccccaagaaatgtcccta	29931500
<---------ARR14(2) <---------ANAC46 <---------LBD16 <---------YAB1 <---------AHL20(2) --------->TOE2(3) <-----------GT1 <---------AHL20(2) ----------------->AGL1 <---------DAG2 --------->ARR11(3) ------->TEIL <----------DOF2 <---------ARR11(3) <---------WOX13(1) <-----------GT1 --------->AHL20(2) <---------At4g35610 <-----------GT1 <---------AHL20(1) --------->At4g35610 -------ICU4 --------->AHL20(1) <---------ZAT18 ---- ------HAHB4 --------->AHL20(2) --------->ARR14(2) <--- ------>YAB1 --------->LBD16 <---------AHL20(1)----------->HVH21 ---- ------YAB1 <---------LBD16 <---------AHL20(2)<---------MYB46(3) <---- ------ATHB12 <---------TOE1(2) --------->AHL20(2) --------->ZAT18 ---------
taattaccctttttgccactgtgtctctccttggattccacggtttaaatatattatttttcggatagtgggctgatggaccttaatgggctagcccaat	29931600
*TSS --------->ZAT14 --------->REM1(2) <---------ZAT14 ===================== ------->GAMYB ----------->GT1 ----->AHL20(2) --------->ZAT18 <------ZmHOX2a(2) ------AHL20(2) ------>ZmHOX2a(1) --------->MYB46(3) <-------- ----->YAB1 <-----------HVH21 <---------ZAT18 --------->ARR14(2) -----ATHB12 <-----------TGA1 <------ZmHOX2a(1)<---------ARR14(2) --->CBF <----------DOF2 <----------DOF2 =========================HOX2a_HOX2a --
tatataactaataggcttcgagcctctttgagtttaagcgtcatctttctccttcgaagtattaggacactctcaacgacggatcagtgtagataaacct	29931700
<------MYB46(1) <------MYB83 --------------->AtSPL8 --------->MYB46(2) <---------------AtSPL8 --------->MYB59 --------->MYB111(1) --------->MYB111(2) <---------MYB46(3) <---------MYB55(1) --------->ZAT2 <---------ZAT2 --------->LBD16 <------NtERF2 --------->At4g35610 <---------LBD16 --------->LBD16 <--------P -------->P <---------ANAC46 --------->ATHB12 --------->MYB52(1) --------->ETT(1) <---------MYB46(3) =====HOX2a_HOX2a <---------LBD16 <---------At4g35610 < ---GT1 <---------ANAC58 <---------ZAT14 <---- ---->ZmHOX2a(1) <---------ANAC58 --------->ZAT18 --------->ANAC46 <------
ccttaccggagagaagcgtaagtcttgccggagagtcgagtgagctgaatggttggtactcaccattttccttcagtaattttctcagagagagctcttt	29931800

AGI:	At1g79550.1
Description:	PGK (PHOSPHOGLYCERATE KINASE). similar to PGK1 (PHOSPHOGLYCERATE KINASE 1), phosphoglycerate kinase [Arabidopsis thaliana] (TAIR:AT3G12780.1); similar to phosphoglycerate kinase, putative [Arabidopsis thaliana] (TAIR:AT1G56190.2); similar to phosphoglycerate kinase, putative [Arabidopsis thaliana] (TAIR:AT1G56190.1); similar to cytosolic phosphoglycerate kinase 1 [Populus nigra] (GB:BAA33801.1); similar to Phosphoglycerate kinase, cytosolic (GB:Q42962); similar to unknown [Populus trichocarpa] (GB:ABK92531.1); contains InterPro domain Phosphoglycerate kinase; (InterPro:IPR001576); contains InterPro domain Phosphoglycerate kinase, C-terminal;
Range:	from: 29928916	to: 29931335	Orientation: Reverse
Links:	TAIR MIPS

AGI:	At1g79560.1
Description:	EMB1047/FTSH12 (EMBRYO DEFECTIVE 1047); ATP-dependent peptidase/ ATPase/ metallopeptidase. similar to FTSH1 (FtsH protease 1), ATP-dependent peptidase/ ATPase/ metallopeptidase [Arabidopsis thaliana] (TAIR:AT1G50250.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ74760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64911.1); contains InterPro domain Peptidase M41; (InterPro:IPR000642); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959)
Range:	from: 29931687	to: 29937478	Orientation: Forward
Links:	TAIR MIPS

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