Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->ANAC58                                                                --------->ANAC58                               --------->ANAC58           <-----------TGA1                           --------->ANAC58               <-----------HVH21                           --------->ANAC46              --------->ANAC46        --------->ANAC46   --------->ANAC58              --------->ANAC58  --------->TOE2(3)    ---------->DOF2                   --------->ANAC58  ----------->ARR10    -----  --------->TOE1(3)<-------TEIL--------->ANAC58        <-----------GT1--------->ANAC58          ----- ----TEIL         --------->CCA1(2)               <------ZmHOX2a(1)   --------->ANAC58          -----   tcatcgttaaacgagactagatacaaaaaacgcaagaacgaagacaaaaataggattaaacgtcacaagcttacgctaagaaactcagaacaacttccaa  29923700                                                ---------->DOF2                                           --------->ANAC58                                           ----------->GT1                                           <------NtERF2                                           --------->ANAC58                                           <---------ANAC46                                         <---------ANAC46                     --------->AtMYB61                                      --------->DAG2                          <---------MYB59     <-----------GT1                 ---------->DOF2                      --------->ANAC58  <---------ICU4                    ---------->DOF2                 ---------->DOF2     --------->ANAC58 --------->ICU4                     --------->MYB52(1)           <-----------ARR10--------->At4g35610 ---->ANAC58                      --------->MYB46(3)            --------->At4g35610     --------->ANAC58 ---->ANAC58               ---------->DOF2------>NtERF2   ---------->DOF2 --------->ANAC58 ---->ANAC46             <---------------------WRI1----------->GT1<------ZmHOX2a(2)   ---------->DOF2   gtaatatttatcacatcaaacaacttcttcaaagtaaccaaaggcgcgtaaaaaggaaattcaagcagatcaaagcacgacctaagctaaaagcaaatca  29923800                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                  <--                     --------->YAB1                                                               <--                   --------->GLK1(2)                                                              ---          --------->ANAC46                                                                       ----          --------->ANAC58                    --------->YAB1                              --------->YAB1          --------->ANAC58              --------->ARR14(2)                               --------->ICU4        ---------->DOF2                 <---------ARR14(2)    ----------->GT1           <---------KAN4(2)       <---------ARR14(2)              --------->GLK1(1)     <---------TOE2(3)    --------->TOE1(3)<-       <---------GLK1(2)       --------->At4g35610         ---------->DOF2        --------->TOE2(3)--       --------->ARR14(2)     ------->TEIL  ----------->RAV1(1)               ----------->HVH21------   aatcgaacagaaacgcaagagaatcagaaacgaagctaaacatatccaacataacatcgattaaaggtaaaacgtcgtctctgaccttagaatgatcaga  29923900                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                      --------->CCA1(2)                                                     --------->ARR11(3)                                                     --------->ARR14(2)                                                     <---------ARR14(2)                                                     <-----------ARR10                                                     <---------ARR11(3)                                                     --------->AGP1     <------NtERF2                                   <---------AGP1    ------>NtERF2                                   <---------CCA1(2)   --------->DEAR3(1)                              ----------->ARR10   ----------->HVH21                            <---------RAP2.3(1)   <---------DEAR3(1)                           ------>NtERF2  --------->RAP2.3(1)                           ----------->RAV1(1)  <------NtERF2                                <---------ATERF1(2)  --------->ATERF1(1)                          <---------DEAR3(1)  <---------------------WRI1                   <---------RAP2.6(2) --------->LBD16                               <---------RAP2.3(2) ------>NtERF2                                <------NtERF2 <---------RAP2.3(1)                          --------->ATERF1(1) <---------ATERF1(1)                         <---------DEAR4(2) ---------ATERF1(2)                          <---------ATERF1(1) -------->ATERF1(2)                          <---------RAP2.3(1) ---------DEAR3(1)                     --------->REM1(2) -------->DEAR3(1)             <------NtERF2<---------DEAR3(1) -----NtERF2                  --------->RAP2.6(2)<---------At4g35610 ------->RAP2.3(1)        ====================================HOX2a_HOX2a -------RAP2.3(1)         ===================================HOX2a_HOX2a -------ATERF1(1)         <------ZmHOX2a(1)===================HOX2a_HOX2a --->NtERF2 ---------->DOF2 --------->At4g35610--------->ATERF1(2) ----->ANAC46--------->DAG2--------->ALFIN1<------ZmHOX2a(1)<------ZmHOX2a(1)            --------->ALFIN1 --------LBD16          --------->ALFIN1   ==================HOX2a_HOX2a          <---------LBD16 ------->ATERF1(1)    <---------ANAC46--------->ALFIN1=============HOX2a_HOX2a --------->ATHB12 --->At4g35610 <-----------HVH21    ------->GAMYB<------NtERF2                <---------ATHB12      -   cgccggcgacgagaaaaagtcagggcgaggagcggcaaccgtgtaggaggcggcagatctgaggagagaagagaaggccattgattcggaagtgggagaa  29924000                       --------->WRKY18(1)                      <--------ZAP1                      --------->At5g28300                <---------ANAC58            ------>ZmHOX2a(2)           --------->CCA1(2)           <------ZmHOX2a(2)          --------->AGP1          --------->ARR14(2)                                                         ------->GAMYB          <---------AGP1                       <---------ANAC58                    ------>MYB83          <---------ARR14(2)                   <---------ANAC58                    ------>MYB46(1)          --------->ARR11(3)                   <---------AtLEC2          <---------REM1(1)          <---------ARR11(3)       ---------->DOF2      <---------YAB1   --------->ALFIN1         --------->GLK1(1)     --------->TOE2(3)    <---------ANAC58   <------MYB46(1)         <---------GLK1(1)     --------->TOE1(3)    <---------ANAC46   <------MYB83-------->P    ---------->DOF2   <-----------HVH21    <----------DOF2            --------->MYB111(1)        ---- --------->DOF2 <---------ANAC58  ---------->DOF2   <---------ANAC58 <--------P  --------->DEAR3(1)--   acaaaagaaagagatctggctcgcggtcaaaaaccctaaaaccccctttgcttggcttatgacttctgagagtaggtgtagagccaacccaaaatataaa  29924100                                       ---------->ID1                                       <-----------GT1                                   <---------DAG2                                   <----------DOF2                                  <---------DAG2                             <-----------GT1                           *TSS<-----------GT1                  --------->YAB1    <---------ZAT18                          --------->ARR14(2)              --------->YAB1          --------->ZAT18         --------->GLK1(2)<---------ARR14(2)        --------->ARR11(3)            --------->ZAT14 ----->MYB46(3)         <---------TOE1(2)           <---------ARR11(3)   <----------DOF2<----------DOF2 ------->MYB52(1)       <---------TOE2(2) ------>ZmHOX2a(1)  --------->YAB1    <------------CBF   ---   caaacgtgaagaatccaaaatgttcgcagatttacacctttttcctatttttaaaatctataagaataagaaatgctttggaattgcactctttttgtct  29924200                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                            <---------YAB1                                                   --------                          <---------ZAT6                                                     --------                     --------->YAB1                      --------->ANAC58                    <-------                    <---------ATHB51                     --------->ANAC46                    <-------                    --------->ICU4           <-------GAMYB                             ----------->GT1                ------------>CBF            <-----------RAV1(1)                       ----------->GT1              <---------TOE2(3)             <---------MYB46(3)<---------ALFIN1    --------->ATHB12 <-    ------->GAMYB --------->WOX13(1)   --------->SPL7    --------->ANAC58    <---------AHL20(2)  ---- --------->MYB52(1) <---------YAB1   --------->TOE1(2) --------->CCA1(2)    --------->AHL20(2)  <---- ------>ANAC46<---------TOE1(3)    ------->TEIL<---------REM1(1)         ------>ZmHOX2a(1)   --------   actcaacggagtttttaaggcaattatagtattaatgtgcctacgactgttgtagagagacgacacactctgttcctataaaattgatgggttaaaatct  29924300      <---------ALFIN1    <---------ALFIN1   <------NtERF2  ------>NtERF2 <---------DEAR3(1) ---------At4g35610 -------->At4g35610 ---------LBD16 ----->ZAT2 ------ZAT2 ------->RAV1(2) ------At4g35610 ->ARR14(2) ->ARR11(3)      --------->ATHB51 --ARR11(3)      <---------ICU4                         <---------WOX13(1) --ARR14(2)      -------->ATHB1                       --------->ATHB12 ----------RAV1(1)                      --------->AHL20(2) ----->At4g35610 --------->ATHB12       <---------AHL20(2)                      --------->ARR11(3) -------RAV1(1) --------->ICU4    ------->GAMYB      <---------ATHB12   <---------AHL20(2)       <--- ->GLK1(2)      <---------ATHB51  ----------->GT1  <---------ICU4      --------->AHL20(2)        ----   gctgcggcacacctatgaattattgcattttttcaacggtattaaaataaaactaatgactgatttttgcatattaaatagagatactgatacaacgaga  29924400                    --------->At4g35610                                                             <            <---------AHL20(2)                                                           <---------TOE2(3)            --------->AHL20(2)                                  ---------->DOF2        ---------->DOF2 ------YAB1<---------AHL20(2)                             ----------->GT1              ============== ----->ICU4--------->AHL20(2)                        --------->AHL20(2)    <---------bZIP60(2)      -   ttattgtttctaaattaatgacagcaaaaaaaaaactcacacataaaactcacaaaaaaatggtgaaaaagatgatgacatggcatatgtaaaggaaggg  29924500                                 <---------WRKY38(1)                                 <---------WRKY12                                <------ZmHOX2a(2)                            --------->ALFIN1                           <-------MYC3                           ------->MYC3                           ------->MYC4                           <-------MYC4                           ------->MYC2                           ------->PIF5                           <-------PIF5                           <-------MYC2                          <---------ANAC46                          --------->TGA1a        --------->ATHB12                          <---------ANAC55(2)    <---------ICU4          <-------PIF5    <---------TGA1a       <---------ATHB12                                 <---          ------->PIF5    --------->O2 --------->WRKY18(1)                                       ----         <---------ANAC46 <---------O2<-----------HVH21                 <----------DOF2         <----        <---------------------WRI1   ------->GAMYB                   --------->ARR11(3)         <----   --------->CCA1(2)      ===================MYC_MYB         <------NtERF2   ---------->ID1     <---- ---------TOE2(3)  ---------->DOF2--------->MYB52(1)      <------NtERF2------>ZmHOX2a(2)        <---- ===================================bZIP_DOF    --------->ICU4       <---------ARR11(3)      -------- ---------->ARR10  =================bZIP_DOF    <---------YAB1<---------ALFIN1             ----------   ttgagatttggacgtggaatacaaagacacgtggatcaacggtcaggcccatgattagtcggcctcactgtgatcttttgtcgttttggcactgagatac  29924600  Previous    Next  AGI:  At1g79530.1    Description:  GAPCP-1; glyceraldehyde-3-phosphate dehydrogenase. similar to GAPCP-2, glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana] (TAIR:AT1G16300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64922.1); contains InterPro domain Glyceraldehyde-3-phosphate dehydrogenase, type I; (InterPro:IPR006424); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Glyceraldehyde 3-phosphate dehydrogenase; (InterPro:IPR000173) Range:  from: 29920795    to: 29924127    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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