Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------ANAC58                                                                                       --------->ANAC58                                                                                       <---------ANAC55(2)                                                                                       <---------ANAC58                                                                                      <--------------                                                                             --------->HSFB2a(2)                                                                             <---------HSFB2a(2)                                                  <----------DOF2      --------->ARR11(3)                                                 ------>ZmHOX2a(2)     --------->ARR14(2)                 <------ZmHOX2a(1)               ====================HOX2a_HOX2a      --------->SPL7           ---------->DOF2                      <------ZmHOX2a(2)      <---------ARR14(2)    <-------      ------------------------>ANAC81           =====================HOX2a_HOX2a      ---------------    ---------->DOF2                            --------->AGP1          <---------ARR11(1)    --------    --------->MYB52(1)                 --------->ICU4                  <---------ARR11(3) --------->SPL7  <---------------AGL15                <---------YAB1                  <-----------ARR10  <-------TEIL  --------------->AGL15              <---------ANAC46         <------ZmHOX2a(1)       <-------TEIL ----------------->AGL1   ----------->RAV1(2)  --------->ARR11(3)     <---------CCA1(2)--------->ANAC58 <---------ANAC55(2)    <---------ALFIN1       <---------ARR11(3) ----------->GT1 <---------------AtSPL3   atcacctaaaggagaaagaggaaaacacacctgtaaatgtcgtaattgagatctttggtgaagaggagaggcaaatcttcgcgaagggtacgtacagcta  29913800                                 --------->ZAT2                                 <---------ZAT2                                --------->ALFIN1                               <---------RAP2.6(3)           <------MYB46(1)                              <---------ANAC58               <------MYB83                     <------                              <---------ANAC58    --------->ZAT18                   <-----------RAV1(2)                              <---------ANAC46    <---------ZAT14               --------->TOE1(1)                         --------->At4g35610      --------->ZAT14           ------->TEIL     <------ZmHOX2a(1)                      <----------DOF2             <---------ZAT18         <---------ZAT18    --------     <---------WOX13(1) <-----------RAV1(1)    ------>ZmHOX2a(1)      --------->TOE2(2)   <------ZmHOX2a(1) -AtSPL3 <---------REM1(1)  ------>NtERF2     --------->TOE2(2)       --------->TOE1(2)<------ZmHOX2a(1) --At4g35610         <---------ICU4  <---------MYB52(1)     <---------AtMYB61  --------->HSFB2a(2) >AtSPL3<---------TOE2(3)<---------At4g35610  --------->TOE1(2)      ----------->RAV1(2)--------->ALFIN1 ->At4g35610        <---------YAB1 <---------------AtSPL3   --------->MYB59<---------ALFIN1--------->ALFIN1   aaccgagattgatgtagaagtcatctttgctgccgtgctggtacttatcctgcgcacttggtttggtcttaacctgcgcacctcgaacaggaggaggagc  29913900                                                                         --------->YAB1                                                                        <---------YAB1                                                                      --------->YAB1                                                                     --------->ICU4    <------MYB83                                                                     <---------YAB1    <------MYB46(1)                                                                   --------->YAB1    <--------P                                                                  --------->ICU4    <-------GAMYB                                                                  <---------YAB1   <------MYB46(1)      ---------->DOF2         <---------ARR11(3)               <---------YAB1      --------->ATHB12  --------->ANAC58            --------->ARR11(3)               --------->ICU4      <------MYB83  --------->ANAC58--------->ALFIN1             <---------TOE1(2)--------->YAB1     <---------MYB46(3) ---ARR14(2)   --------->DAG2 --------->ARR14(2)             --------->YAB1  --------->DAG2     <---- ->ATERF1(1)  ---------->DOF2 <---------ARR14(2)            --------->ICU4  ---------->DOF2    <-----   ctggacgctaaagagagaaagtggagagagactatcttcttcaaactcgtagctattggacgatgatgatgatgatgataaagcttggttggaaatgggt  29914000                                                                     --------->At4g35610                                                                     --------->ZAT2                                                                  <---------ZAT2                    --------->ETT(1)                              <---------At4g35610                  <---------MYB52(1)                       --------->ANAC58               <---------LBD16                             --------->ANAC58       <---------WOX13(1)                                  --------->ANAC46  <----------DOF2 <-----------HVH21                     <---------ARR14(2)                        <-- -----GLK1(1)<-----------GT1         <------ZmHOX2a(1)  --------->ARR14(2)                     <----- -------------------ANAC81    ---------->DOF2         ----------->ARR10                     ---------   ttctctttgagtgattttccggtcggaagaaggaaagaaggagagagattggggagaagaaacgccatagctgctggattttagagcttctcttgttctt  29914100                                                                                        --------->HSFC1(2)                                                                                        <---------HSFC1(2)                                                      ----------->HVH21          --------->ANAC58 ---------RAV1(1)                                     ----------->TGA1           --------->ANAC46 -----DOF2                             --------->GLK1(2)                         --------->ANAC58 ->ID1     ---------->ID1   ------>NtERF2           <------ZmHOX2a(1)         <-------TEIL<----------DOF2   ttgttgttgttttgtcttaatttttcaaggcgacttaagagaatcagagggagaggatgacgagttgagaagagcgaagatgcacgaagaagctttgttg  29914200                                                                                                <----                                                                                                <----                                                                                             <-------                          ----------->GT1                                                  <---------ANAC58                         *TSS        --------->TOE1(3)                                     <---------ANAC58        <---------At4g35610         <---------HSFB2a(1)                               <---------YAB1        <---------ZAT2   <---------ZAT6                      <----------DOF2      <---------AHL20(2)        --------->ZAT2 <---------ANAC58              <-----------GT1           <---------AHL20(1)        --------->At4g35610         --------->HSFB2a(1) <----------DOF2        --------->AHL20(1)  --------->CCA1(2)    <---------ANAC58            <---------AHL20(2)   <XXXXXXXXXXXXXXXXXXXXMIR400 <   gaagataaacagctgctcgttttttgagtggtaatcaaaccttcgcgttgtattttttcttttctttattttgacttctaatatttttatgtttcttact  29914300                     <---------AHL20(2)                     --------->AHL20(2)                 <---------AHL20(2)                                     ---------->DOF2     <--------                --------->AHL20(1)                                  --------->AtMYB61 <---------ANAC55(2)                <---------AHL20(1)                                ------>NtERF2       --------->ANAC55(2)        <---------ARR11(3)                                <---------AHL20(2)         <---------------AtSPL8 -----DAG2     <---------AHL20(2)<---------TOE1(2)       --------->AHL20(2)      ---------->DOF2 <--- ------DOF2  <-----------TBP    =================HOX2a_HOX2a     --------->RAP2.6(2) --------------->AtSPL3 ----GT1--------->ARR11(3)      ------>ZmHOX2a(1)        <---------AHL20(2) ---------->DOF2--------->ICU4 ---------AHL20(2) <-----------TBP        ------>ZmHOX2a(2)     --------->MYB46(3)   --------------->AtSPL8   ttttatttgatatctatatatatttatatttctcctaagtttgatctaatatgaacaaaataaatagccaccaaaaaagaaagaaaagacgtactaattc  29914400                                <---------AHL20(2)                                --------->ATHB51                            <---------AHL20(2)                            --------->AHL20(2)                           --------->AHL20(2)                        <---------AHL20(2)                       --------->AHL20(1)                       <---------AHL20(2)                       --------->AHL20(2)                       <---------AHL20(1)                  --------->ANAC58                 --------->SPL7 --------->AHL20(2)               <---------SPL7  --------->ICU4               --------->TOE1(2)<---------ICU4             --------------->AtSPL8             <---------------AtSPL8                          <---------ARR11(3)    ---------->DOF2             <---------------AtSPL3                          <---------AHL20(1) --------->LBD16    ---------->DOF2  ------->TEIL                            --------->ARR11(3) --------->At5g28300 --------->AtMYB61--------->ANAC58<---------YAB1             --------->AHL20(1)----------->GT1 -ICU4   ---------->DOF2--------->AHL20(2)             --------->ANAC58        <---------ANAC46 ------ETT(1)--------------->AtSPL3                    --------->ANAC58--------->TOE2(3)   cgaccaaaaagaaaagacgtacgaatttatttaattatttttagtaaatgatttttcaaggaaaatatttgtacattagtaccgtaaaagtataatctta  29914500                                                                                <---------AHL20(2)                           <---------AHL20(2)                                ------->TEIL                          --------->AHL20(2)                             <---------TOE2(3)               --------->ICU4                                        <----------DOF2            -----           --------->At5g28300          <---------AHL20(2)          =================================          ----------->GT1 --------->AHL20(1)                      <---------ARR11(3)           <-----      --------->DAG2      <---------AHL20(2)                      --------->ARR11(3)           <-----     ---------->DOF2      <---------AHL20(1)        <-----------GT1 ------>ZmHOX2a(2)  <---------YAB1   tgcattaaaaagcagtaattttggaaaataaaattttcatgtttaatctcacatttacaatactatgtgatctttaatgaattttttttgttattgtcct  29914600                                                         --------->REM1(2)                                                       <-------MYC2                                                       ------->MYC2                                                       <-------MYC3                                                       ------->MYC3                                                       ------->MYC4                                                       <-------MYC4                                                      <---------O2                                                      <--------ABF1                                                      <---------ANAC55(2)                                                      --------->ANAC55(2)                                                      <---------ANAC46                                                      --------->O2                                                      ==========================================bZIP_DOF                                                  xxxxxxxxxxxxxxxx>smallRNA(s)          <---------AHL20(2)                     --------->ANAC58          --------->AHL20(2)                     xxxxxxxxxxxxxxxx>smallRNA(s)      <------ZmHOX2a(1)                          --------->ANAC58    --------->ANAC58                         --------->YAB1                                        <-    --------->ANAC58                        <---------YAB1                                   <-------  --------->ICU4                        --------->AHL20(2)                                  --------- ->ZmHOX2a(1)                           <---------AHL20(2)                               --------->MYB52(1) ==HOX2a_HOX2a                     <---------AHL20(2) <---------TGA1a                ---------->DOF2 ----ANAC58           ----------->GT1   --------->AHL20(1) <---------ZAT14        --------->AHL20(2) ----ANAC58  <---------AHL20(2)    --------->AHL20(2) --------->TGA1a         --------->AHL20(2)   <-   tgccataaggaattttttaatgcatagaaaaacataaaaaaataaaatgataagacacgtgtaaactgggcctaagcccaaaaaataaaaagaccggtat  29914700  Previous    Next  AGI:  At1g79505.1    Description:  other RNA Range:  from: 29911666    to: 29914330    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g79510.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G16320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64929.1); contains domain NTF2-like (SSF54427) Range:  from: 29912906    to: 29914225    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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