Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->ANAC58              --------->ANAC58              --------->ANAC46        ----------->GT1                            <-----------HVH21              <----------ID1          <---------ZAT6      <-------TEIL  --------->ANAC55(2)         - ->YAB1      --------->SPL7    --------->AHL20(2) --------->ANAC58      --------->YAB1       <------- --GT1 <-----------GT1   <-----------GT1          --------->ANAC58      <---------ANAC55(2)  --------   actcttgattttccatacgacaaaataaaaccatataatacagttaaatgacaagacaaattcatataaaacttacataattttgtcacatatatagctg  29876000                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                 <---------ICU4     --------->YAB1                         --------->ANAC46          <---------ATHB12                         --------->ANAC58        --------->WOX13(1) -------->At4g35610      --------->ANAC58       <---------------AGL15               <---------TOE2(2) --At4g35610         --------->ARR11(3)         --------------->AGL15            --------->ANAC46 ->At4g35610         <---------ARR11(3) --------->ANAC46                 <---------YAB1 --------->AHL20(2)   aatgctgaatatacaaaaatcaatatcacgcagaatacttacacggtttaccaattatataaaacatagtctattactattagacgcagattatataaca  29876100                                           XXXXXXXXXXXXXXXXXXXXXXX>MIR163                                          ---------->DOF2                                  <---------AHL20(1)                                  --------->AHL20(1)                                  --------->AHL20(2)                             <---------AHL20(2)                             --------->AHL20(2)   --------->TOE1(3)                             --------->AHL20(1)   --------->TOE2(3)                                 <              --------->ANAC46    <---------AHL20(2)                       <---------YAB1         <--              --------->ANAC55(2)--------->AHL20(2)               ----------->GT1              <-----              <---------ANAC55(2)<---------AHL20(2)  ---------->DOF2       <---------AHL20(2) -------   tacaacaagtagccatacgtagtttcaagaattaattaaatttttaaagaaaccttaaaaccccaaataagttattttttattgtcaatattcgaactaa  29876200                                   --------->TOE2(3)                                  ----------->GT1                                 <---------TOE2(3)                               <---------YAB1<---------HSFB2a(2)                              --------->AHL20(2)            ----------->GT1                              --------->AHL20(1)<---------PCF5                              <---------AHL20(2)<---------PCF2                         <---------REM1(2) ---------YAB1               --------->YAB1  --------->HSFB2a(2)         <----------DOF2 ---------GT1          <---------AHL20(2)   <---------LBD16----------->GT1    ---------->ID1     <--- ----ICU4             --------->AHL20(2)   ----------->RAV1(2) --------->AHL20(2)      --------->ZAT14 -->ICU4            ------->TEIL--------->YAB1 ----------->HVH21        <---------DAG2 <---------ZAT14   ttactataagcttcttcccatgaatttaaaattataatgttaaacttctgggaccgctagactgataaaatgtcccttttgtctctctctacacacatat  29876300                             --------->YAB1                             <---------ICU4                        ------------>CBF                      --------->ANAC58                      --------->ANAC46                      --------->ANAC58                ----------->TBP                <---------AHL20(2)                                                   <-----------HVH21                --------->AHL20(2)                                                  --------->ANAC46              ----------->TBP--------->ATHB51                 <---------ARR11(3)    --------->ANAC58            ----------->TBP <---------ATHB12       *TSS <---------ZAT6        ---------->DOF2-------- ----TEIL   --------->AHL20(2)              ----------->TBP   --------->ARR11(3)    --------->ANAC58   acatctctatacatatatataaatacgccaataatcgctatccattacaaaaaccattgtgttagatattcaaacaaaaaaaaagaacgtcacaaacatc  29876400                                                                               --------->ANAC58                                                                               --------->ANAC58                                                                             <---------ALFIN1                                                                          <------NtERF2                                                                         <---------ATERF1(1)                                                                         ------>NtERF2                                                                        --------->DEAR3(1)                                                                        --------->RRTF1(2)                                                                        --------->RRTF1(3)                                                                        --------->RAP2.6(2)                                                                        --------->RAP2.3(3)                                                                        <---------ATERF1(2)                                                                        --------->ANAC46                                                                        --------->RAP2.3(2)                                                                       --------->ORA47(2)                                                                       --------->RRTF1(1)                                                                       --------->RAP2.3(1)                                                                     --------->ANAC58       <--------                                                                     --------->ANAC58       ---------                                                                  <---------SPL7           --------->TOE2(3)                                                              --------->ALFIN1 --------->ANAC46                                                           --------->ICU4--------->ABI4(1)-----------                   --------->ATHB12                      ---------->DOF2--------->ATERF1(2)--------->At5g28300                <----------DOF2                       --------->ANAC58 --------->ERF1  <---------ALFIN1              <---------DAG2                          --------->ANAC58<---------ATERF1(1)------------ ->YAB1 --------->AtMYB61            ---------->DOF2---------->DOF2 --------->SPL7  ----------->HVH21   agactgatcaccatcactctttgattagaatgagcaactcaaagtcatactggagaaagcaaagatggggaacgccgccacaagccctaacaccgttaat  29876500         <------ZmHOX2a(2)        <---------ARR14(2)        --------->ARR14(2)                                                                   --------        <---------ARR11(3)                                                                   <-------        --------->AGP1  --------->ANAC58                                                     --------        --------->ARR11(3)---------->DOF2                                                 --------->ARR14(2)  ==============HOX2a_HOX2a                                                              <---------GLK1(1)  <------ZmHOX2a(1)     --------->ANAC58              --------->ANAC58                  <----------DOF2 -MYB52(1)       --------->ANAC58                     --------->ANAC58            <---------ICU4 >DOF5.7(2)      --------->AtLEC2           --------->At4g35610           <---------TOE2(3)  <------- ---->AGL15      --------->ANAC58           <---------At4g35610           <---------TOE1(3) <-------- ----->AGL2   --------->ARR14(2)        <------ZmHOX2a(1)--------->WOX13(1)   <-------TEIL<---------ARR14(2)   ggaaggaccagatccagacatgcaagacgaaagaaccaagaaggagagctcatgggaagcaattagagaatggtttaaggttcataagggcatttctgga  29876600                                                <---------At4g35610                                                <---------ZAT2                                                --------->ZAT2                                                --------->At4g35610                                               ------>NtERF2                                           ----------->HVH21                                         <---------bZIP60(2)                                         <---------ANAC55(2)                                         <---------bZIP60(1)                                         --------->bZIP60(1)                                         <---------TGA1a                                         --------->TGA1a                                         <---------ANAC58                      <---------ALFIN1   --------->ANAC55(2)                     --------->MYB46(3)  <---------O2                                   <---------ANAC58      <---------At4g35610==========================bZIP_DOF                             <-------GAMYB      --------->At4g35610<----------DOF2 <---------ANAC58                               <---------ANAC58  <-----------HVH21  <---------MYB55(2)  <---------ANAC55(1)                      <------NtERF2 ->HSFB2a(2)        ------>MYB83         <---------ANAC46                        ------>NtERF2 --HSFC1(1)         ------>MYB46(1)   ----------->HVH21                        <------NtERF2 ->HSFC1(1)         -------->P  --------->MYB46(3)    <----------ID1         <---------DEAR3(1) --HSFB2a(2)        ===============================MYC_MYB                 <---------ANAC58    ------ -LBD16    ------>ZmHOX2a(1)  ----------->RAV1(1)  --------->MYB52(1)      <---------ANAC58 ---------   aatatgtcatctccttcggtccaaccactttgcaacagctatgacgtgccagctaagggacaagacttgaggctcttgctcggcgtcttgggttgtcctc  29876700                                                                      <---------HSFB2a(1)                                                                     <---------KAN4(2)                                                                    <---------GLK1(2)            <---                                                               <---------ATHB12                ------                                                           --------------->AGL15               <-----                                     --------->WRKY12      ==========================================                                     --------->WRKY38(1)   <---------------AGL15              <------                                     ----------->HVH21    ----------------->AGL2              -------                      ----------->HVH21                   ----------------->AG                <------                <---------ANAC58  --------->LBD16         ----------------->AGL1              <------                <---------ANAC58 --------->HSFB2a(2)      ----------------->AGL3        <-----------GT1 >ZmHOX2a(1)<---------MYB52(1)   <---------HSFB2a(2)      <-----------------AGL2    --------->ICU4<-- ->ID1     <-------GAMYB        <---------LBD16        <----------DOF2--------->HSFB2a(1)   <--------   ttgctccaatctccgttgtcgtctctgacctatttcccgatgaccctcttcttggttctttccaaatcaagaatgtcccatttgtgagtattactaatta  29876800                                                                         <-----------GT1                                                                      <---------YAB1                                                                     <---------AHL20(2)                                                                     <---------AHL20(1)                                                                     --------->AHL20(1) --------GT1                   <-----------GT1                      --------->YAB1 -->HAHB4                  --------->AHL20(2)                       --------->AHL20(2) ----ICU4                  <---------AHL20(2) --------->AHL20(1)   <---------YAB1 ==========================================================================MADS_MADS ---ATHB51                <---------AHL20(2)  <---------AHL20(1)<---------AHL20(1) -->ICU4               --------->AHL20(2)     <---------AHL20(2)--------->AHL20(2) ---YAB1               <---------AHL20(2)     --------->AHL20(2)<---------AHL20(2)               ---- ---ATHB12         --------->AHL20(2)<---------ZAT14       --------------->AGL15       <----------DOF2 ---------GT1      <---------AHL20(2)--------->ZAT14      --------->TOE2(3) <---------CCA1(2)  ------ -ICU4<----------DOF2 <---------AHL20(2)     --------->AHL20(2) --------->AHL20(1) ---------->ID1<---   ttccctctctttggtttatatttatttatttattttcagtatacaaattttatttgtgtttcttaatttattatatttctatcttgttcctttgagaaaa  29876900  Previous    Next  AGI:  At1g79420.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G19540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64951.1); contains InterPro domain Protein of unknown function DUF620 (InterPro:IPR006873) Range:  from: 29876351    to: 29879208    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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