Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <---------ANAC58     ------->GAMYB                           <-----------GT1         <---------ANAC58             ===    <---------ALFIN1                      <---------ICU4           <-----------GT1                --- ----------GT1                           --------->ICU4       <---------YAB1                <-------- ---->GT1             ----------->GT1 <---------YAB1 --------->At4g35610                   --------->AHL20(2)   taaacaacaccctgtaaggctaagaggtaatttgcaaattgtcatttttactagcatctgtattatgttttacttgtttacaaaacacaaaaattaactt  29869500                                                                                -------->HAHB4                                                                                --------->YAB1                                                                               <---------YAB1                                                                             ------>MYB83                                                                             ------>MYB46(1)                                                                            =========================                                                                     --------->YAB1                                                                    <---------AHL20(2)                  --------->ANAC58                                 --------->AHL20(2)     <---------DAG2                  --------->ANAC58                           <-----------GT1<---------------AGL15                --------->CCA1(2)        ----------->GT1 --------->ATHB12   --------------->AGL15   --------->AHL20(2)                    <---------ZAT6 <---------YAB1     <---------MYB59<----------DOF2 ===========================================================================================MADS_MADS -------------->AGL3    --------->AHL20(1)              --------->ICU4     --------->TOE2(3)    ----- ---GT1    ---------->DOF2       ------->TEIL       <---------MYB52(1)  <-----------GT1 <------------   cccatatatatacaaaagataagaaatatgttatggacttatggtgttaaatctgttgattattgaccatataataacctaattatagtaaactttttgg  29869600                                                                                  --------->YAB1                                                                                <------------CBF                                                                               <---------ICU4                                                                               <--------ATHB1                                                                               -------->HAHB4                                                                               --------->ATHB51                                                                              <---------ATHB12                                                             <------------CBF <---------AHL20(2)                                                         <---------ZAT6       --------->ICU4       <---------YAB1                                 <------NtERF2           <---------ATHB51 =====MADS_MADS              <---------MYB52(1)     <---------ANAC46          --------->AHL20(2) ------>GT1      <---------WRKY38(1)                <---------ANAC58     <-------TEIL -----AG         <---------WRKY12                   <---------ANAC58<------ZmHOX2a(1)         -------   gtaaaatttctgattacagtcaacttaatccgttttccaagggttgaaatagaggcgtagagtaattgaaggacgttcaaataattgtaaacacatctat  29869700                                                            <---------YAB1         ------>MYB46(1)                                  --------->AHL20(2)         ------>MYB83                          <---------ANAC46       ------->GAMYB             <---------AHL20(2)       --------->YAB1      --------->MYB46(3)         --------->AHL20(2)   --------->ICU4        ---------->DOF2     ------>MYB83      <---------AHL20(2)      <---------ANAC55(1)       <---------HSFB2a(2)     -------->P       <---------AHL20(2)       <---------ANAC58          --------->HSFB2a(2)     ------>MYB46(1)  <---------AHL20(1)       <---------ANAC58    --------------->AGL15            > -->WOX13(1)          --------->AHL20(2)     <---------AHL20(2)    <---------------AGL15           <-   caactccaaccaaatgtaaactaatttttttttttttaatttctaaattacttgtgaaaattataaattcttgttttagaaagcattttcagtttttttt  29869800                                       <---------YAB1                                       --------->ANAC58                                       --------->ANAC58                                             <                          --------->ARR14(2)                                                       <-          <---------AHL20(2)--------->YAB1                                                    <------      ----------->GT1     <---------ARR11(1)                       <---------ATHB12    ------>ZmHOX2a(2)     <---------TOE2(3)    <-----------ARR10                <---------YAB1             <------ZmHOX2a(2)     <---------TOE1(3)    <---------ARR14(2)              --------->ARR11(3)         --------->ARR14(2)     --------->DAG2      <---------ARR14(1)               <---------ARR11(3)         <---------ARR14(2) --------->YAB1          <---------CCA1(2)               --------->YAB1              ------->TEIL  <- >>>>>>>>MYB98   --------->YAB1    <-----------HVH21    --------->ICU4        <---------------------WRI1 ----------GT1  <---------YAB1    --------->AtMYB61     <---------YAB1     >>>>>>>>>TBF1 ---------->DOF2   ttaacataaggtttaattttcataagcgtatcatcaccatcacgcttgaagaatgctcatgatcatcgaatcaagaagaagaagatggatccaaagttgt  29869900         --------->TOE2(3)       -------->P    <---------ANAC58    <---------ANAC58 ----------DOF2 --------ANAC58                                             <---------ANAC58 ---MYB46(3)            ----------->GT1                     <---------ANAC46                    ----- --------ANAC58  --------->At4g35610    <-----------GT1     <---------ANAC58              <----------   tgctttgcttacctcaaggagatgaactgtttaatccccttaataccatgtttattcaaatggcttgcattctcgtcttctctcaattgttttatctcct  29870000                     --------->PCF5             --------->HSFC1(2)                <---------ZAT2                  <---------HSFB2a(1)            --------->WRKY18(1)    --------->GLK1(2)           ------>NtERF2          <---------ARR14(2)        <---------ANAC58          --------->RAP2.6(2)     <---------GLK1(2)     <---------ANAC58          ------>NtERF2           --------->ARR14(2)    <---------ANAC58        --------->SPL7    <---------MYB52(1)    <---------HSFC1(2)             <----------DOF2        --------->At4g35610--------->WRKY38(1)  --------->HSFB2a(1)           <---------MYB52(1)        <---------At4g35610--------->WRKY12  <------ZmHOX2a(1)             <---------LBD16 ->ZmHOX2a(1)   --------->ZAT2  ----------->ARR10    <----------DOF2 --------->YAB1      <---------ZAT6 -GT1----------->RAV1(2) <-------GAMYB      ----------->GT1 <---------ANAC58 --------->LBD16   tcttaaaccctgcggccaagctggtcccgttgcccagattcttgtaaggaaatttctttcttgcgttacaagaatcacccggttttttgtagtggaaaat  29870100                                                                                               <-----                                                                                               ------                                                                                             <------ZmHOX2a(1)                                                                                           --------->ANAC55(2)                                                                                           <---------TOE2(3)                                        <---------TOE2(3)                           ---------->DOF2                                    <---------AHL20(2)                            <---------MYB59                                <---------CCA1(1)                                 --------->TOE2(3)                                <---------RVE1(1)                            --------->YAB1<---------TOE1(3)                     <-----------------AGL1                   ------>ZmHOX2a(1)  <---------ANAC55(2)   gtctaacaagtttttgttttgttatccatattggatattttttaggctgggattgtgttgagtcctgttttgctctcaagaatacctaaagttaaggaat  29870200                                ------>ZmHOX2a(1)                                        ------>ZmHOX2a(2)                 --------->At4g35610                   --------->ARR11(3)              <---------AGP1      --------->LBD16  <---------ICU4                  <---------ARR11(3)              --------->ARR11(3)     --------->HSFB2a(2)  <-----------GT1        <---------LBD16                       --------->ARR14(2)     <---------HSFB2a(2) <---------YAB1         --------->MYB52(1)                     <---------ARR11(3)   ------>ZmHOX2a(1) <---------GLK1(2)        <---------DAG2                        --------->ALFIN1 ----GLK1(1)     <---------At4g35610          <----------DOF2         --------->ATHB12 <---------ARR14(2) --->GLK1(1)    ----------->RAV1(1)      ------>ZmHOX2a(1)<----------DOF2------>ZmHOX2a(2)   tcttcctccagaaaaatgcagcagattattactccttcttctccttcgctttacggacatctttcatgttcttgatcggtcttgaagtggatctacattt  29870300                         --------->At5g28300                        ----------->GT1                       <---------DEAR3(1)                       <---------ANAC46                      <---------LBD16                   ------>NtERF2                   --------->At4g35610                 ------>NtERF2                   <---------At4g35610                 --------->LBD16      =========================                   --------->ZAT2            <---------ANAC58               ------>ZmHOX2a(1)                   <---------ZAT2     <---------At4g35610         <---------ARR14(2)                ---------->DOF2       --------->At4g35610         --------->ARR14(2)      <<<<<<<<<NAM              --------->ANAC58   --------->TOE2(3)    <---------RAP2.6(2)  --------->TOE1(3) <-------              --------->ANAC58   --------->TOE1(3)   <---------LBD16       --------->TOE2(3) <-------           <XXXXXXXXXXXXXXXXXXXXMIR396B      <---------ANAC58 ------>ZmHOX2a(1)<---------TOE2(3)   catgagaagaaatttcaagaaagctgcggtgataaccttgagctcattcgtggtttccggcctcctcagtttcgcttccttaatgttattcatccctttg  29870400  Previous    Next  AGI:  At1g79400.1    Description:  ATCHX2 (CATION/H+ EXCHANGER 2); monovalent cation:proton antiporter. similar to ATCHX1 (CATION/H+ EXCHANGER 1), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT1G16380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67417.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) Range:  from: 29869885    to: 29872733    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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