Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->GLK1(1)                                                                       <-----    <---------YAB1                    <---------ARR14(2)                                  <---------- -------ARR11(3)    --------->ALFIN1  --------->ARR14(2)                                 <---------ICU4 ------>ARR11(3) --------->DAG2      <------ZmHOX2a(1)                       <---------bZIP60(1) -->DAG2        ---------->DOF2<---------ANAC46                              --------->bZIP60(1)    < -->DOF2    ---------->DOF2 --------->ALFIN1                   ---------->DOF2      <---------MYB52(1)   tatcttatgagttccaaagaaagtggagaagtggagggaggaaatggtctgaatttcattcaagacaaagaaaattgtgatgtccccttaattatctctt  29817700                                    <---------WOX13(1)                                  <---------ICU4                                  -------->HAHB4                                  --------->ATHB51                                  <--------ATHB1                                  --------->ATHB12                                 <---------ATHB51                                 <---------YAB1                                 <---------AHL20(2)                                 --------->ICU4                         ----------->RAV1(1)                        <---------ETT(1)                        ----------->HVH21                        --------->ANAC46                                                    ---------                        ------->GAMYB                                                      ----------                       --------->MYB46(3)               --------->HSFB2a(2)                ========== -----DOF2    <<<<<<<<<<GT-3b    --------->AHL20(2)     <---------HSFB2a(2)       <---------YAB1 -GT1    ------->TEIL --------->ANAC46     <---------YAB1                     --------->YAB1--------- ----------DOF2<-----------GT1 --------->YAB1     --------->ARR11(3)     ----------->GT1 <----------DOF2   ttctttctatgtatatttttcttcacccgacaaaaataattgactatcaatacatcttccaaaaactatatcaattggtataatatcaatgctttcataa  29817800                     <---------AHL20(2)                    <---------AHL20(1)                    --------->AHL20(1)                  --------->AHL20(1)                  <---------AHL20(1)                 --------->AHL20(2)                                             --------->AHL20(2)     --------->TOE1(3)        ----------->RAV1(1)                        <-----------GT1     --------->TOE2(3)       --------->ANAC46                         <---------ICU4 >YAB1      --------->YAB1 <-----------GT1                           <---------YAB1 ------->AGL3  --------->AHL20(2)                                    --------->ICU4        --------->TOE2(3) ==================================================================================================== ------>AGL15--------->AHL20(2)              <---------ANAC46      --------->YAB1      <-------------   atagaaaccttgaataaaaatatatattttcacaacataatacagtatcgtttagatagtagaacataaacataattacccataaaatactaatcttaga  29817900                                     <---------At5g28300                                    <-----------GT1                               --------->AHL20(1)                               <---------ARR11(3)                               --------->ARR11(3)                               <---------AHL20(1)                               --------->AHL20(2)             <---------YAB1                               <---------AHL20(2)         <---------DAG2    <---------CCA1(2)   <---------ZAT14                   <----------DOF2 --------->TOE2(3)      <---------ZAT18             <---------ARR14(2)         <---------AHL20(2) ==MADS_MADS            --------->ZAT18             --------->ARR14(2)        --------->AHL20(2) --AGL15      <---------AHL20(2)<---------AHL20(2)  ------->TEIL           <----------DOF2   <------ZmHOX2a(2)   aaacctctatctgtttttattttgagtccacaatatatttactgtttttcaacgaatccactttatgttaagttcaacttttaaatttgttagagatcga  29818000                                            <---------REM1(1)                 --------->ATHB51                                         <---------AHL20(2)                   -------->ATHB1                                        <---------AHL20(2)                    --------->ATHB12                                        --------->AHL20(1)                   <---------YAB1 <--------                                        --------->AHL20(2)                 --------------->AGL15            <-------TEIL             --------->YAB1                        <---------------AGL15    <---------WOX13(1)               --------->AHL20(2)                   <-----------------AGL2  --------->ATHB12                  <---------YAB1          --------->HSFB2a(2)             <-------- <---------AHL20(2)   <---------TOE2(3) <---------AHL20(1)  <---------HSFB2a(2)<------------CBF  ==== --------->AHL20(2)<----------DOF2--------->YAB1   ------------>CBF       <-----------------AGL3 <---   ccattaattgaacatacatcgatttatgttttttttttataatataatgtaggcccaatggcccagaacatagcctactattattgggcctgtagcctgc  29818100                     ------->MYC3                     ------->MYC2                     <-------MYC2                     <-------MYC3                    --------->ANAC55(2)                    <---------ANAC55(2)                    --------->TGA1a                    <---------ANAC58                    <---------O2                    --------->O2                    <---------TGA1a                    <---------ANAC46                                           --------->ZAT2                    <---------ANAC58                                           <---------At4g35610               <---------ICU4                                                  ----------->RAV1(2)               --------->YAB1                                                  --------->At4g35610              <---------ATHB12                                                 <---------ZAT2              --------->ICU4         *TSS                                  ------->TEIL             - -ANAC58  ------------>CBF   ------->TEIL--------->At4g35610         <---------DEAR3(1)            <- -ANAC58<-----------GT1  ------->TEIL------->TEIL                  --------->LBD16                 <- =============================bZIP_DOF   <---------At4g35610     <---------LBD16     <---------At4g35610 -------DOF2--------->WOX13(1)   ------->TEIL   --------->LBD16 --------->MYB52(1)--------->At4g35610   tttagcatatttaccaattatcacgtgtatgtatgtatgtatcatctgtccagagaaaattgctaataccggcgatgaatcagctgcagcaactccaaaa  29818200                    ------->TEIL                   <---------ALFIN1                  <---------ZAT18                  --------->ZAT14                  <---------ZAT14                ------->PIF5               --------->LBD16               <---------DEAR3(2)              <---------ATERF1(2)              --------->DEAR3(1)              <---------DEAR3(1)             <------NtERF2             --------->ATERF1(1)            ------>NtERF2            <---------ATERF1(1)            --------->ABI4(1)           --------->RAP2.3(3)           <---------ATERF1(2)           --------->ATERF1(2)           --------->RAP2.3(2)           <---------DEAR3(1)           --------->DEAR3(1)               <---------ARR11(1)          --------->ORA47(2)                ------->TEIL          --------->ERF1                    --------->ARR14(2)          --------->ATERF1(1)               <---------ARR14(2)          --------->DEAR4(2)               <---------ARR14(1)                          ------>ZmHOX2a(1)          --------->RAP2.3(1)              <---------CCA1(2)                       --------->ARR11(3)         <---------ATERF1(1)             <---------ANAC58                          <---------ARR11(3)     <---------ARR14(2) <----------DOF2  <---------ANAC58                          <---------ARR14(2)     --------->ARR14(2)<---------DAG2<---------MYB52(1)                            --------->ARR14(2) --------->LBD16<-------PIF5        <-------GAMYB                <------ZmHOX2a(1)<---------GLK1(1) -------->LBD16<---------ATERF1(1)<------NtERF2                 <----------ID1   ---------->TaMYB80 ----------RAV1(2)--------->ABI4(2)--------->DEAR3(1)<------ZmHOX2a(1)      ----------->GT1        <- --------LBD16--------->ATERF1(2)<---------ZAT18   --------->MYB59         --------->DAG2  <---------ZAT14   cccaggggaatcgccgccggtgcacccttttgtagcgccgttgtcgtatctattaggaacatggagaggacaaggagaaggtgaatatcctactataccg  29818300                    ------>ZmHOX2a(2)                           <-------TEIL                    <-------TEIL                         ------>ZmHOX2a(2)                  --------->ARR11(3)                    <------ZmHOX2a(2)                  <---------ARR14(2)                   --------->ARR14(2)                  --------->AGP1                       --------->AGP1                  --------->ARR14(2)    --------->ANAC58--------->GLK1(1)                  <---------ARR11(3)    --------->ANAC58<---------GLK1(1)                 <---------GLK1(1)  --------->LBD16    <---------ARR11(3)                 --------->GLK1(1) <---------LBD16     --------->ARR14(3)        <---------DEAR3(1)         <---------ETT(1)    <---------AGP1       --------->SPL7             <---------LBD16      --------->ARR11(3)           --------->ARR14(2)    --------->At4g35610     <-----------------AGL1     <---------ARR14(2)           <---------ARR14(2)    <---------At4g35610<---------MYB52(1)             --------->At4g35610  --------->TOE1(3)   --------->ANAC46<------ZmHOX2a(2)------>NtERF2 <-----------HVH21        --------->TOE2(3) ---------DOF2  ----------->ARR10 --------->RAP2.6(3) <---------CCA1(2) <-----------GT1   tctttccgctacggcgaagagatccgtttctcacattccggcaaggtaaccatatcagatctccgattcatttttaaccttaatccaatctgcataccaa  29818400                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                               --------->ANAC58                        --------->ANAC46                                               --------->ANAC46                  --------->At4g35610                                               --------->ANAC58             --------->At4g35610                                            <---------ARR14(2)              <---------At4g35610                                            --------->ARR14(2)              --------->ZAT2                                         <---------ANAC58                   <---------GLK1(1)                                         <---------ANAC46                   <---------ZAT2                 <-----------HVH21 ----------->HVH21                        --------->GLK1(1)    ----     --------->CCA1(2)           --------->LBD16                       --------->YAB1 ------->TEIL    --------->ARR14(2)          <---------DEAR3(1) ---------->DOF2     <-----------RAV1(2)       <---    <---------ARR14(2)<----------DOF2    <---------ANAC58 --------->AtLEC2<------ZmHOX2a(1)------>NtERF2   aatcgcgatacgcttactctgtcactttgtgtagccggtgatagcgtatacgcaaaagacatggaaattggaatcaggagctccgatgcacgccgagagt  29818500                                                                                                    <                                                                                                    <                                                                                                    -                                      <---------ICU4                                               <-      <---------ANAC58                --------->ATHB12                                            <--      <---------ANAC58               <---------YAB1                                               ---   <----------DOF2                  <-----------HVH21                                             ---  <---------ANAC58                <-----------STF1                                     <<<<<<<<<CBP60g  <---------ANAC58   <---------HSFC1(2)          <---------ZAT14                       <<<<<<<<<SARD1 ------->GT1         --------->HSFC1(2)          --------->ZAT14     <-----------RAV1(2)        ----- ------MYB46(3) <-----------RAV1(2) <-----------TGA1       <---------ANAC46  --------->YAB1   <------   ggttactttcgtccaagaccagatggttctattgaagtcgtcattgctcagagcacaggtctcgtcgaagtccaggttaacataatccaaatttccatta  29818600  Previous    Next  AGI:  At1g79260.1    Description:  Identical to Uncharacterized protein At1g79260 [Arabidopsis Thaliana] (GB:O64527); similar to hypothetical protein [Vitis vinifera] (GB:CAN83082.1); contains InterPro domain Region of unknown function DUF1794 (InterPro:IPR014878) Range:  from: 29818137    to: 29819202    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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