Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --GLK1(1) ->GLK1(1) >ARR14(3) -ARR14(3)               --------->ANAC58 -AGP1                   --------->ANAC58                                               <---------TOE2(3) >ARR14(2)             ---------->DOF2                                                  <---------TOE1(3) -ARR14(2)        <---------ANAC46                                          --------->MYB52(1) ------ -ARR11(3)        <---------ANAC58                               <------ZmHOX2a(1)  <---------HSFB2a(2) >ARR11(3)        <---------ANAC58  ---------->DOF2             --------->ICU4   <---------ARR14(2) ---ARR10     <---------GLK1(1) --------->YAB1                 <---------TOE2(3) --------->ARR14(2)   gttaagagagtcttggaaatgcgtctaaagccattgataaaagaagtgagcattttcagagcggtaaggatgagcgagaaacggttcttgaaggtttatg  29805200                            <---------At4g35610                            --------->ZAT2                            --------->At4g35610                            <---------ZAT2                         ------->GAMYB               <---------ARR14(2)               --------->ARR14(2)               --------->ARR11(3)               <---------ARR14(3)                                                                 ---               <---------AHL20(1)                                                   --------->ANAC58               --------->AHL20(1)                                                   --------->ANAC58               <---------ARR11(3)                                                   --------->ANAC46<             --------->ANAC58                                                 <---------GLK1(1) -----             --------->ANAC58 ----------->HVH21 <---------GLK1(1)             --------->GLK1(1)------   <-----------HVH21    --------->MYB46(3)      --------->GLK1(1)      --------->At4g35610     <----- --->ANAC55(2) --------->ARR14(3)        <-----------GT1               <---------At4g35610<-------TEIL   taatgtgtcatccacaagatattgcaaccgagctgatggagttttacgagaaatccaaaaacatgaaacgtttagctgagaaatccaagaaatacatccg  29805300          <----------DOF2         <---------DAG2    <---------GLK1(1)    --------->GLK1(1)   <---------ARR14(2)   --------->ARR14(2)                                       ----------->GT1               <---------YAB1   <---------GLK1(2)                                        <---------REM1(1)         <---------DAG2  <------ZmHOX2a(1)                         --------->ARR14(2)                 <-----------GT1 ------->DOF2                               <---------ARR14(2)               <---------HSFB2a(1) ---------TOE2(3)                  ---------->ID1 <-------TEIL               <---------HSFC1(2) ---->LBD16          <----------DOF2   <----------DOF2  <---------TOE2(3)    --------->HSFC1(2) --->TOE2(3)        <------------------------ANAC81    ---------->DOF2       --------->HSFB2a(1) ----ANAC55(2)  ------->TEIL  <----------DOF2<---------GLK1(1)        <---------ANAC46<----------DOF2   taaaggattccccttttgaatctctttttcatcttttgtttctttggatatgttcattaaagatgtaacattgtgtagaattttccagctttatcaatgg  29805400                                                                                                 ----                                                                                          <------MYB46(1)                                                                                          <---------ANAC46                                                                                          <------MYB83                                                                                          -----------                                                                                         <---------AtMYB61                                                                                         --------->MYB55(2)                                                                                         <---------MYB46(3)                                                                                         --------->MYB46(2)                                                                                        <---------MYB55(1)                                                                                       <---------MYB52(1)                                              --------->LBD16                         <-------MYC3                                     ----------->GT1                                  ------->MYC3                                  <---------GLK1(2)                            ---------->DOF2   ----             <-------TEIL     <------ZmHOX2a(2)    ----------->GT1     ---------->DOF2<-------MYC2 <----------DOF2     <---------AtMYB61      <---------LBD16         --------->ANAC46  ------->MYC2   atacttttgaatcggttcatgttttggtttagatcagattagttaaaccggaatagaaaaatatcaaaacacaaaacgcgaagaagcacgtttggtgaaa  29805500                                                  <------NtERF2                                                  --------->ATERF1(1)                                                 <---------RAP2.3(1)                                                 ------>NtERF2                                                 <---------ERF1                                                <---------DEAR3(1)                                                --------->ATERF1(2)                                                <---------ATERF1(2)                                                <---------ANAC46                                                <---------RAP2.3(2)                        <---------CCA1(2)       <---------RAP2.6(2)                    <---------ANAC58            <---------RAP2.3(3)            ------>NtERF2                      --------->RAP2.6(3)           --------->ANAC58                    <------NtERF2           --------->ANAC58                --------->MYB52(2)      ========================bZIP_DOF     <---------MYB46(3)        --------->ATHB12  --------->ANAC46  <---------TGA1a        <---------ANAC58         <---------YAB1  <----------ID1    --------->ANAC55(2)    <---------ANAC58        <----------DOF2  --------->ANAC58  --------->TGA1a <---------ARR14(2)           ------>ZmHOX2a(1)  --------->ANAC58  <---------O2 <---------HSFB2a(2)         <---------ARR14(2)                     < ----->ANAC58       --------->O2 --------->HSFB2a(2)         <---------ARR11(3)                    -- >GT1 ---------->DOF2 --------->ALFIN1   <---------MYB52(1)  --------->ARR14(2)       *TSS         <- ----->ANAC58       <---------ANAC58--------->ARR14(2)----------->HVH21  --------->YAB1 ---------->DOF2   cgaaacgccaaagacgccctagacgtgtctctcttccagacccgttcgtggcggcagtgacaaaatcctctttattgataaaaacgtttgcaaagttgca  29805600                                                       <----------DOF2                                                     <------NtERF2                                                   <---------RAP2.6(2)                                                   <---------ANAC46                                     <---------At4g35610                       <-------GAMYB ----------DOF2                 ----------->HVH21  <---------ANAC58           <-----------RAV1(1) ------->TOE2(3)            --------->WOX13(1)     <---------ANAC58     <---------ICU4            --- --------DAG2            --------->GLK1(2)        ---------->ID1       <---------ATHB12<---------AHL20(2)   acctttttgggtttagtacttgaagagaatcaatctgacagcaaatagttttggcgtctttctaactcaacccatcatctctgttgcattttatcgagag  29805700                                                                                           <---------                                                                                          ------>ZmHOX2a(2)                                                                                         <------ZmHOX2a(2)                                                                                        <---------ARR11(3)                                                                                        <---------ARR14(2)                                                                                        --------->ARR11(3)                                                                                        --------->ARR14(3)                                          <---------ANAC58                              <---------ARR14(3)                                       <----------DOF2                                  --------->ARR14(2)                                      <---------HSFC1(2)                               --------->RVE1(1)                     <---------ALFIN1 --------->HSFC1(2)       --------->ATHB12     ---------->DOF2                    ----------->HVH21 <---------HSFB2a(1)   ------>MYB83=========================HOX2a_HOX2a            --------->CCA1(2)         --------->HSFB2a(1)   ------>MYB46(1)      --------->LBD16           --------->ARR14(2)       <---------ARR11(3)    --------->MYB46(3)    --------->ANAC46           <---------ARR14(2)     --------->LBD16         --------->DEAR3(1)    <---------HSFB2a(2)--        --------->ALFIN1         <---------HSFB2a(2)     --------->DEAR3(2)     --------->HSFB2a(2)--      <---------ANAC46           --------->HSFB2a(2)   <-----------GT1  ------>ZmHOX2a(1)<---------RVE1(1)     <---------TOE2(3)    <----------DOF2 <---------ANAC58--------->DREB2C(2)  <---------LBD16     -- ------>GLK1(2)    <------NtERF2<---------LBD16  <---------At4g35610    ========================HOX2a_HOX2a   aatatttgaggtggatatggcctcgacccttttctccagaactttcttggctgctagtcaccgactgattactccttctcttccgcaaaagatctttaat  29805800              <---------ZAT6     <---------DAG2   ------>NtERF2  --------->RAP2.6(2)                  ------>ZmHOX2a(2)                   <---------At4g35610  <---------ALFIN1                    <------ZmHOX2a(2)                   --------->MYB52(2) <---------MYB55(2)                  <---------ARR14(2)                 <---------MYB52(1) --------->MYB46(3)                  --------->ARR14(2)        <---------WRKY18(1) -DOF2<----------DOF2         <---------GLK1(2)                <-----------GT1 ------->ANAC58          --------->ARR14(2)                   ----------->HVH21 ------->ANAC46          <---------ARR11(3)                   --------->WRKY38(1) ------->ANAC58         <---------GLK1(1)          <-----------GT1<---------ALFIN1                  <   ccagccacctttctcagtgtaagtcgatatctgattcgcgatctgttctcaattagccattcgtttgaccactcgttagcttctgggtttgagagtgtct  29805900                                        <---------MYB46(3)                                       --------->ALFIN1       <---------ANAC58           <<<<<<<<<<<<<<<<<LFY                                        <------       <---------ANAC58          ----------->HVH21                                           <-------  --------->ATHB12           --------->ATHB12                        --------->ICU4          <------- ---------WOX13(1)          <---------YAB1                   <----------DOF2      <---------ZAT14   ggattgatttcgagcgtttggattgtttctatgatttgacagtggttctactgggttttcgagcttttgaaatgttgaatagactatagagaattgctta  29806000                                                                               <------MYB83                                                                               <------MYB46(1)                                                                              <---------TOE2(3)                                                                              --------->MYB111(1)                                                                              --------->MYB59                           <----------DOF2                                    --------->MYB46(2)                          <---------ANAC58                            --------->YAB1                          <---------ANAC58                           <---------YAB1 ----DOF2           <---------ATHB12                                 --------->ICU4 --ANAC58         --------->WOX13(1)--------->YAB1       <---------YAB1  --------->AHL20(2) --ANAC58      <-----------HVH21   <---------YAB1     --------->ICU4 <---------ATHB12<---------ZAT14   attgttgatgaggtctatgtcaatcgatgcttttcttatcaaagtttgaaattggacttatgagttttgtaatcataaattaggtagtgaagttttatgt  29806100  Previous    Next  AGI:  At1g79220.1    Description:  mitochondrial transcription termination factor family protein / mTERF family protein. similar to mitochondrial transcription termination factor-related / mTERF-related [Arabidopsis thaliana] (TAIR:AT5G64950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47894.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 29803828    to: 29805418    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g79230.1    Description:  ST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1); thiosulfate sulfurtransferase. similar to ATRDH2 (ARABIDOPSIS THALIANA RHODANESE HOMOLOGUE 2), thiosulfate sulfurtransferase [Arabidopsis thaliana] (TAIR:AT1G16460.2); similar to unknown [Populus trichocarpa] (GB:ABK94242.1); contains InterPro domain Rhodanese-like (InterPro:IPR001763); contains InterPro domain Thiosulphate sulphurtransferase, conserved site; (InterPro:IPR001307) Range:  from: 29805586    to: 29808832    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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