Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                              <-----------GT1               =========                 <---------ANAC58  <---------DAG2         --------->YAB1  <---------AtMYB61 --------- --->GAMYB  ----------->GT1        <----------DOF2       <---------YAB1   --------->MYB59  <---------ALFIN1 ----At4g35610   <---------ANAC58 <---------ANAC58  --------->ZAT6    <---------At4g35610------>ZmHOX2a(1) --->At4g35610   <---------ANAC46 <---------ANAC58 ------->TEIL  <----------DOF2      ------>ZmHOX2a(1)   tgaagtatcagagatggtttcttgttcaagtcaattgctttatcaaggtcatgaactctatgatatactttctgcttaggtctccatcctcctccaccag  29773300                                                            --------->ANAC46                                                            --------->ANAC55(2)                                                            --------->ANAC58                      <-------TEIL                          <---------ANAC55(2)                 --------->MYB52(1)                         --------->ANAC58         <---------At4g35610                       <------ZmHOX2a(1)         --------->At4g35610                      --------->ANAC46 ->ANAC46----------->RAV1(2)                     --------->LBD16        <---------GLK1(2) ====================RAV                        <---------LBD16   <----------DOF2     <---------YAB1 -->RAV1(1)    --------->MYB46(3)         <---------GLK1(2) --------->ANAC55(1) <---------TOE1(3)   -   acttgtgtctcacctgaacaaacgtccattgcaatctactagatgattctccaggaaacaacacgaaactttcagtttctctaagcttatgaattctcaa  29773400                                                                                       --------->AHL20(2)                                                                                 --------->TOE2(3)                                                                                 --------->YAB1                                                                                 ------->GAMYB                                                                                --------->MYB46(3)                                                                              --------->MYB55(1)                                                                             --------->MYB46(3)                                                                             --------->AtMYB61                                                                             <---------MYB46(2)                                                                             <---------MYB111(2)                                                                             --------->DEAR3(1)                 <---------ARR14(3)                                          <---------MYB111(1)                 --------->ARR11(3)                                          <---------MYB55(2)                 <---------ARR11(3)                                      ------>ZmHOX2a(1)      <----           <------ZmHOX2a(2)                                         --------->ARR14(2)--------->YAB1          <---------ARR11(3)                                    <---------ZAT14 <---------MYB55(2)          --------->ARR11(3)   --------->MYB52(1)               --------->ZAT18------>MYB83     -----      ---------->DOF2          <-----------GT1                  --------->ZAT14-------->P       <----   ------->GAMYB --------->ARR14(3)                      <---------GLK1(2)  --------->MYB46(3)  ----- -------->MYB52(1)          --------->YAB1  --------->GLK1(2)   <---------ZAT18------>MYB46(1) <-----   aataacggaaaagatcgaagaccttctgtataataacggtttagacattctatcaaacagcttctgtgcacaatcctcaccaaccacaatgaaattcaaa  29773500 -----ARR11(3)                                                                                   <--- ---->ARR11(3)                                                                             <---------ZAT14 -----ARR14(2)                 --------->ANAC46                                        --------->ZAT6 ---->ARR14(2)                 --------->ANAC58                     ------>ZmHOX2a(1)<-----------GT1 ----CCA1(2)                   --------->ANAC58        --------->ANAC46  <------ZmHOX2a(1) --------->ZAT14   tcttctacttctaacttctctgagaaatattagacgaaatcacaaaacaatacgaacacaaaacaatttcctcgaggaagaatggattaacactgcaatt  29773600                      <---------CCA1(1)                      <-----------HVH21                      <---------RVE1(1)                   --------->At4g35610                     --------->ARR11(3)                   <---------At4g35610                     <---------GLK1(2)                    <---------LBD16                   --------->ICU4             ----------->GT1--------->At5g28300      --------->ARR14(2)           --------->ZAT14        --------->LBD16                 --------->GLK1(2)      <---------ARR14(2)    <---------At4g35610   --------->AHL20(2)                      <---------ARR11(3)      --------->ZAT14<---------ARR11(3)      <------ZmHOX2a(1)--------->WRKY18(1)         --------->ARR11(3) --------->LBD16 ---------->DOF2  --------->LBD16 <---------AHL20(2)              *TSS   <---------GLK1(2) --------GT1 ------>ZmHOX2a(1)  ----------->RAV1(2)     <---------LBD16   <---------ANAC55(2)   ttccccagtattctcctagtaaagattttttgctccctggactctgaggagtttaatttccgcggtcattctaaacccgtatgcagaaacaaaatctcgt  29773700                                                            <-----------RAV1(2)                                                          <-----------HVH21                                                         <------MYB83                                                         <------MYB46(1)                                                  <------------CBF                                              --------->ARR11(3)             <------------CBF                                              <---------ARR11(3)        <---------------AGL15                                             <---------CCA1(2)<---------At4g35610    --------->AHL20(2)                <---------AHL20(2)  <---------ETT(2)<-----------RAV1(1) --------------->AGL15                --------->AHL20(2)  <---------WRKY38(1) --------->MYB59----------------->AGL3            --------->AHL20(2)      --------->ETT(2)====================RAV --------->ATHB12    --------->GLK1(1)               --------->WRKY38(1) <---------MYB46(3) --------->AHL20(2)    <---------GLK1(1)      ------------>CBF<---------CCA1(2)<---------WRKY12<---------AHL20(2)   ttatgggtttccaaatatttaaattcaggcccaatgggtcgacccatatatctattgttgggtcagaggctgaaccatttattgaaattgaatagatagt  29773800                                                                                           <---------                                                                                           ----------                                                                                           ----------                                                      --------->ZAT14                   -------->HAHB4                                                      <---------ZAT14                   <---------AHL20(2)                                   <---------ANAC58   <---------ZAT18                   <---------ICU4                                   <---------ANAC58   --------->ZAT18                  --------->ICU4                                   <---------ANAC46 --------------->AtSPL8        --------->TOE2(3)                              <-----------RAV1(1)   <---------------AtSPL8  <---------AHL20(2)                      <---------ZAT18             ------->TEIL             --------->AHL20(2)                  <-----------RAV1(2) --------->REM1(1)                 --------->YAB1 <---------ATHB51                  ========================RAV<---------ANAC46          <---------ATHB12<---------YAB1   tttcttctcgtcgaactcagacaggggactcattgttgcttcaacttatgtgtatgtgtactacaaaaatcaaatcataaaatttcttaattattcgtac  29773900                                                                                    ------>MYB83                                                                                    ------>MYB46(1)                                                                                 --------->DEAR3(2)                                                                <---------AHL20(2)<xxxxxxxxxxxxxxxxxx            --------->ANAC46                          <---------YAB1  <---------TOE2(3)     xxxxxxxxx    --------->AHL20(2)                               <---------ARR11(3)        --------->MYB52(1)    <---------AHL20(2)                               --------->AHL20(1)        <-----------GT1      - ------AtSPL8                             <-----------GT1       --------->AHL20(2)------->GAMYB    <- ----->AtSPL3                     <-----------GT1    --------->ARR11(3) <------ZmHOX2a(1)  --------->MYB46(3) ----->AtSPL8       ---------->DOF2   <----------DOF2<---------AHL20(1)----------->GT1   --------->MYB52(1)   ataaatataaataaaccccagtgaaagaaaatgaaatttccttttttctattgaatatttttgtattaaaataaggaaatataaccgactccaacggctc  29774000                            --------->ATHB12                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                        xxxxxxxxxxxxxxxx>smallRNA(i)                       <-------TEIL                        --------->ANAC46         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)            --------->ANAC58  <---------YAB1       ------>ZmHOX2a(2)              ----------->HVH21 --------->AHL20(2)   <------ZmHOX2a(2)      ---------->DOF2                                 -------- <---------AHL20(2)  <---------ARR14(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)            <------- xxxxsmallRNA(fl3)   ------->TEIL          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <---------ANAC46 xxxxxxxxxxxxxx>smallRNA(si3)         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <----------DOF2  --- -------->YAB1       --------->ARR14(2)   <---------MYB59--------->ANAC58     <---------------AGL15 --------YAB1       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ANAC46     --------------->AGL15   tattataatctctatataacatggatccatccattgggattagacctaaaaacgctctcacgcacaacttctaattctttcttctttgagtgaaataaaa  29774100                                                              --------->ARR11(3)                                                              <---------ARR11(3)                                                          --------->YAB1                                                 ---------->DOF2                                            <---------ANAC46 --------->YAB1                                            ================bZIP_DOF                    xxxxxxxxxxxxx                           <---------ATHB12 <---------ANAC55(2)                    --------->LBD16  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     ----------->GT1 --------->ICU4        --------->ANAC55(2) ->AHL20(2)            ------>ZmHOX2a(2)    <---------TGA1a <---------YAB1        <---------ANAC55(2) --AHL20(2)        <---------YAB1           --------->O2 --------->ICU4          ------>ZmHOX2a(2) <- ------>YAB1     --------->YAB1             <---------O2 <---------ATHB12----------->RAV1(1)   <-----   tcaaaactctctaattcgatgatgatccaattagtagacattgaagacgtgaaaagccgatgatgatcatctctgcaacatgatccgtaagagttagatt  29774200  Previous    Next  AGI:  At1g79120.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G21970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70768.1); contains InterPro domain Protein of unknown function DUF860, plant (InterPro:IPR008578) Range:  from: 29771677    to: 29773682    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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