Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------AHL20(1)                                                   --------->AHL20(1)                                           --------->MYB52(1) -------->LBD16                         --------->YAB1 ----->NtERF2                           <---------ICU4    <---------ANAC58 ------->ANAC46                        <---------YAB1     <---------ANAC46 -------LBD16        <---------ALFIN1  --------->ICU4     <---------ANAC58                    <<<<<<< ---DAG2          <-----------GT1    --------->YAB1--------->ARR11(3)                         <------ ----DOF2      --------->ANAC46   ----------->GT1  <---------ARR11(3)           --------->MYB52(1)   tccgccaatttcgatacaagttaccacttcaaaattttgtaataataactgaaaatatttgtgtgtttcaaaatcaccacaataaccgatactacaatca  29763700                                                                       <----------DOF2                                                                  <---------WOX13(1)                                                         <---------AHL20(2)                                                        <---------AHL20(1)                                            --------->DAG2      --------->ATHB12        --------->ANAC58                          ----------->RAV1(1)----------->GT1   <---------YAB1           --------->ANAC58 <<ARR2                  <----------ID1    ---------->DOF2   --------->YAB1           ---------->DOF2 ---ATHB12    ---------->DOF2     <-----------GT1      <---------CCA1(2)     ---------->DOF2   aacaaggattgcaattcaaagcattaggcaacaaaattaccaaaaaaaagtgaattcatatatttatgattgactttgagaaagtgtgtaaagcaaatga  29763800             ----------->GT1                                                --------->AHL20(2)            ----------->GT1                          --------->ANAC58   --------->AHL20(2)      -----          ---------->DOF2                            --------->ANAC58   <---------AHL20(2)--------->AHL20(2)       --------------->AGL15          <---------ARR11(3)         ----------->GT1   --------->HSFB2a(2)      ----------------->AGL1          --------->ARR11(3)       <--------P   <---------AHL20(2) ------      ----------------->AG        ---------->DOF2--------->TOE1(3)  <---------AHL20(2)  ----------->GT1    <-----------GT1    --------->ANAC46--------->CCA1(2)     ----------->GT1<---------AHL20(1)-------   gaaaatttaccaaaaagataaatataggcaaaaaatcaaagatatatcaaaccataagaaacatggtaagttaattaaaaaatttccagtatgtaaataa  29763900                                                                                                <----                                                                                               ------                                                        <-----------GT1                       -------                           --------->CCA1(2)            --------->ZAT6                        -------                          --------->ARR11(3)         <---------AHL20(2)                       -------                          <---------ARR11(3)         --------->AHL20(2)             --------->RVE1(1)      <-----------GT1  <---------TOE2(3)             <---------ICU4                --------->ARR11(3)      <<<<<<<<<GT-1   ---------->DOF2               --------->ICU4              <---------AHL20(2) ---->AHL20(2)       --------->AHL20(2)        ----------->GT1                  --------->AHL20(2)--- --->YAB1--------->TOE2(3)--------->ARR11(1)  ----------->GT1                --------->YAB1<---------REM1(2) -->AHL20(2)         <---------AHL20(2)<---------------AGL15         ---------->ID1<---------ARR11(3)   aaatagatttacctttgaacaaattaaagatatgaaaattccaaaaaatgggtaattaatactatttgtttgtccctaaaaataaaatctctcttcacgt  29764000                                                                                                -----                                             --------->MYB52(2)                       ----------->GT1 -----MYB52(1)                      <-------GAMYB                                 ---------->DOF2 --->TOE2(3)   --------->AHL20(2)  <------MYB46(1)      <------MYB83         ---------->DOF2    ----- -->ANAC58     ----------->TBP     <------MYB83    *TSS--------->MYB59    --------->AHL20(2)   ------ -->ANAC58 ----------->GT1--------->MYB46(3)<-------TEIL<------MYB46(1)  --------->AHL20(2)   ------- -->ANAC46 <---------ANAC46 -------->P  <---------TOE1(3)              ------>MYB46(1)<----------ID1 ------>MYB52(2)      <------ZmHOX2a(1) <---------TOE2(3)              ------>MYB83 ----------->GT1--   tagtcgcatcgatgtgtataaataggaaacaaccatttggttgaggttcgtttcgatttggtcttccctcaccaaataaaaaagaaaagagaaaaaaaaa  29764100                ------->TEIL             --------->ANAC58        --------->TOE2(3) --------->ANAC58        <----------ID1 --------->ANAC58    ---------->DOF2 ---->ANAC58 --------->ANAC58                        ------->TEIL ---->ANAC58 --------->ANAC46                     --------->ANAC58           <-----------GT1 -------- --->DAG2------>ZmHOX2a(1)                        --------->ANAC58       <----------DOF2    --------- --->DOF2<-----------HVH21----------->RAV1(1) --------->ANAC58    <---------CCA1(2)  ------>ZmHOX2a(1) -------->DOF2 <---------ALFIN1               --------->ANAC58 <-----------GT1<-----------GT1<-------   gcaaagccatccttcacgcacatcaaagcaccaaaaacaaaaaccgaaacgcatgcatttctaattttctatcttctttttaacttcctcttctcccacc  29764200                                                                                                   --                                                                                                -----                                                                                     ----------->RAV1(1)  --------->YAB1                                                     ------>ZmHOX2a(1)        <------ ->ANAC46                                                     <----------DOF2     --------->HSFB2a(2) >MYB46(3)                               <------NtERF2    <----------DOF2        <-----------------AGL1 --ALFIN1                     ------>ZmHOX2a(1)       <---------CCA1(2) ------>ZmHOX2a(1)  --------->GLK1(1)   attttcatcatcttcttctctctaaacctctccttcaatggccgtcgatgctcaccatctctttctttctcctcctcaactcttctccaacaggtatcta  29764300                                                     ------->TEIL                                   -        <---------ZAT14                             <---------GLK1(2)                             <--        --------->ZAT14                        --------->MYB52(1)                              ------      --------------->AtSPL8                --------->ANAC58                                   <----- ----->GAMYB                                --------->ANAC46                          <---------TOE2(3) ---->MYB52(1)              <----------DOF2 --------->ANAC58                         <---------DOF5.7(2) ---MYB52(2)   --------->ATHB12      <---------AHL20(2) <----------DOF2              --------->MYB52(1)   acgctctctctgtacaatctttggagttttctttgtgattttatcaacgtaactgaatcttttcttatttgtatttttgcagagaattaacgatgaataa  29764400                        <---------ARR14(2)                        --------->ARR14(2)                    <-----------GT1                      <---------MYB46(3)                  <---------DEAR3(2)                      <---------DEAR3(2)              <---------ANAC46                     <---------DEAR3(1)               <---------DEAR3(1)                     <---------ANAC46              <---------RAP2.6(2)                     <---------RAP2.6(2)          <---------At5g28300                     <---------ANAC58           ----------->HVH21                     <---------ANAC58           --------->ARR14(2)             ------>MYB46(1)            --------->YAB1--------->DEAR3(1)             -------->P<-------GAMYB   <---------ATHB12 <------NtERF2 -------->ZAT6     ------------>AtMYB77<<<<<<<<<ARR2<---------RAP2.3(1) ---------GT1------>MYB83--------->ARR14(2)    <-----------HVH21 <---------DAG2                    -- --->YAB1 --------->DEAR3(2)         --------->WOX13(1)------>NtERF2           --------->ANAC46   --- ----ICU4 --------->MYB46(3)      --------->YAB1<---------ARR14(2)<----------DOF2           ---------   taacactatggaaccaactagtggcggtttctgcaataacaatcaaaccggttacggcgtcgtttcacctttctccgttccaaaccatacatcaacaaca  29764500                                   <---------ARR14(2)                                   --------->ARR14(2)         --------->ARR14(2)                                  <------NtERF2              <-------GAMYB                                  --------->ATERF1(1)       <---------DEAR3(2)                                 <---------RRTF1(1)         ----------->GT1                                 ------>NtERF2              <---------MYB46(3)                                 <---------RAP2.3(1)     --------->ABI4(1)                                 <---------ERF1          ------------>AtMYB77                                 <---------ATERF1(1)     ------>NtERF2                                 <---------DEAR3(2)     <---------ALFIN1              ------>ZmHOX2a(1) <---------RAP2.3(2)     --------->DEAR3(1)           ------>NtERF2        <---------RAP2.6(2)     --------->DREB2C(2)       --------->ANAC58         <---------RAP2.3(3)     ------->GAMYB       --------->DEAR3(1)       <---------DEAR3(1)     --------->MYB46(3)       --------->ANAC58         <---------RRTF1(3)    --------->ABI4(1)       <---------ALFIN1       <---------ATERF1(1)    --------->AtMYB61      >>>>>>>>>MYB2           <---------RAP2.3(1)    <---------ALFIN1------>NtERF2  ------->GAMYB              --------->ANAC46        --------->DEAR3(1) --------->RAV1(1)           <---------DEAR3(1)     <---------MYB55(2)    <---------AtMYB61 ------>MYB46(3)       <------------------SPL14     --------->MYB46(3) --------->DEAR3(1)     ------- >MYB46(3)--------->DEAR3(1)--------->SPL7        --------->ANAC46  --------->ANAC46         --------   acaacagcaacgcctcctcttcttcatgtgtacggcggctctgatactattcccaccaccgccggttactacgccgatggtgctactaatctcgactgtg  29764600  Previous    Next  AGI:  At1g79110.1    Description:  protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G12920.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96244.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 29764051    to: 29765584    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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