Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------AGP1                  <---------ANAC46               ------>ZmHOX2a(2)                   ----------->GT1                         --------->ANAC58             --------->ARR11(3)                    <---------ANAC58          >>>>>>>>>RAP2.2          <---------WOX13(1)                       <---------ANAC58          --------->TOE2(3)-------    <---------HSFB2a(2)                           <-----------------------TaNAC69(2)       --------->ANAC58    --------->HSFB2a(2)                       <-----------RAV1(1) --------->ZAT6  <---------ICU4   cgttttccagtaattgatctagctctgtgtttccatcacattcaaattttgttgtgtgaaaaaacaaaacactatccaatctaaaaatttcacaagaatc  29750300                                   --------->ICU4                                <---------YAB1--------->TOE2(3)                                <---------AHL20(2)                         <---------ANAC58                               <---------AHL20(1)                          <---------ANAC58     --------->ANAC58          <---------AHL20(2)                  --------->ATHB12         <--------     --------->ANAC58          --------->AHL20(2)                <---------WOX13(1)         --------- -->GLK1(2)                    --------->AHL20(1)       <------ZmHOX2a(2)  --------->ANAC55(2)<------   aattcttaagcaattttgttagaccaatggcaatataatggttaagaaacttaatcggatcaattggattgatttgtgcgtaatctaattaacaaatacg  29750400                                              --------->GLK1(2)                                              ------->TEIL        ----------->GT1                       --------->ARR14(2)      <---------ANAC58            ----------->GT1          ----------->GT1      <---------ANAC58         <---------ATHB12    --------->HSFB2a(2)     --------->HSFC1(2)      --------->WOX13(1)   <---------LBD16     <---------HSFC1(2)     --------------->AGL15<---------LBD16                                -----    ------->TEIL         <-----------GT1      <---------ARR14(2)       --------->TOE1(2)      <------ -ARR14(2)          --------->ATHB12         <---------GLK1(2)       ------->TEIL            -------- >ARR14(2)        <---------WOX13(1) --------->AHL20(2)   ----------->GT1            <------ZmHOX2a(2) ---LBD16       --------->ATHB12  <---------TOE2(3)<---------HSFB2a(2) <---------ANAC46     <--------   gagacgaagcttgtgaatcgattgatttcaccaattaagttaaatacgaatctcgggaagaggttaaattgtaccttggacaaggcgatcgagagaaccg  29750500                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  <--       <---------ICU4           <----------DOF2                                                  ----   <-------TEIL              <---------ARR11(3)                                                  ---- ---->LBD16                  --------->ARR11(3)   --------->YAB1                           <---------ANAC58 ---LBD16              <-----------HVH21       <----------DOF2                             <---------ANAC58 ->MYB52(1)         <---------ANAC58     ---------->DOF2                    --------->ANAC58    <---- -ARR14(2)          <---------ANAC58 <---------ZAT6  --------->MYB52(1)     --------->ANAC58<--------   gagagttcatcttggctattgagcgtgtcaagagctttagagtcaaagtctttaatgacggactcgagcatcgctgataagcctcgagccattgcttctc  29750600            <---------WRKY18(1)           --------->WRKY38(1)       <------NtERF2      --------->RRTF1(2)      ==========================RAV      --------->RRTF1(3)      --------->RAP2.3(3)      --------->RAP2.6(2)      --------->RAP2.3(2)      --------->DEAR3(1)      ----------->RAV1(1)     --------->ATERF1(1)     --------->RAP2.3(1)     --------->DEAR4(2)     <------NtERF2     --------->RRTF1(1)    <---------ATERF1(1)    --------->ABI4(1)    ------>NtERF2   --------->RAP2.3(3)   --------->RAP2.6(2)   --------->RAP2.3(2)   --------->RRTF1(3)   --------->RRTF1(2)   <---------ALFIN1   --------->DEAR3(1)   --------->ATERF1(2)   <---------ATERF1(2)   <---------DEAR3(1)   --------->ANAC46  --------->RRTF1(1)  <------NtERF2  --------->DEAR4(2)  --------->ATERF1(1)  --------->RAP2.3(1)  --------->RAP2.6(1)  --------->ORA47(2)  --------->ERF1 --------->ABI4(1) <---------At4g35610 <---------DREB2C(1) --------->At4g35610 ------>NtERF2 <---------RAP2.3(1) <---------ATERF1(1) <---------DEAR4(2) -------->ANAC46 -------->DEAR3(1) ---------DEAR3(1) -------->RRTF1(2) ---------ATERF1(2) -------->ATERF1(2) -------->RAP2.3(3) -------->RAP2.6(2) -------->RRTF1(3) -------->RAP2.3(2)                ----------->HVH21 ---------ALFIN1                  <---------WOX13(1) ------->DEAR4(2)                >>>>>>>>>GATA-3 ------->RAP2.6(1)               >>>>>>>>>GATA-1 ------->ORA47(2)                >>>>>>>>>GATA-2 ------->RAP2.3(1)               >>>>>>>>>GATA-4 ------->RRTF1(1)             <---------ANAC46                           <---------SPL7 ------->ATERF1(1)          <---------MYB46(3)                          <---------MYB46(3) ------->ERF1               --------->MYB55(2)                         <---------AtMYB61 ------>ABI4(1)            <---------DEAR3(1)                          --------->ALFIN1 --->NtERF2--------->WRKY45--------->ALFIN1                     --------->GLK1(2) -------At4g35610        <---------ANAC46                      <---------ARR14(2) ------>LBD16           <---------DEAR3(1)                     --------->ARR14(2) ------>At4g35610      <---------ZAT14                         <---------GLK1(2) -------ATERF1(1)      <---------LBD16                     --------->At4g35610            --------->At4g35610 ----->ANAC46         <-----------RAV1(1)                  <---------At4g35610         --------->At4g35610 ----->DEAR3(1)     ----------->RAV1(2)                  <-----------RAV1(2)           <---------At4g35610 -----LBD16--------->WRKY12<---------AtMYB61     <---------MYB46(3)<---------LBD16<---------YAB1    < --DOF2------>NtERF2--------->At4g35610          --------->MYB111(1)<---------DEAR3(1) <---------ZAT2   cgccgccgccgcattgaccatcttctgcggtggtggattgacatgagctagtagttgcatcagcagaatcgcggtggtccgagtctgatagctgctccat  29750700                          <------MYB83                          <------MYB46(1)                          <---------MYB46(3)                       <-------GAMYB        *TSS          --------->MYB111(2)                    <---------ANAC58--------->ANAC58    --------->DEAR3(1)--------->MYB52(2)           <------ZmHOX2a(1)      ----------->TGA1   <------NtERF2      --------->MYB55(2)          <----------ID1        <---------ICU4  --------->LBD16     <-----------RAV1(1)  --------------->AGL15 <---------ANAC46  ------>NtERF2       <---------MYB46(3)   <---------------AGL15 <---------ANAC58 --------->LBD16   ------------>MYB.PH3(2)<-----------------AGL1 <---------ANAC58 <---------LBD16---------->DOF2    <---------TOE2(3)         <---------ANAC58--------->ANAC58 ---------LBD16------>ZmHOX2a(1)   <---------TOE1(3)  ---------->DOF2   --------->YAB1             <-   ttcccggcgaggctctcctaaagtttgttggttttttaaggttttcttcaagaggaaaaagagccttgtgtggataatgacgcaaatagccctgagaagt  29750800                                 --------->HSFB2a(2)                                 <---------HSFB2a(2)                 <---------RVE1(1)                 <---------CCA1(1)      <-----------GT1           *TSS                                ------>NtERF2    <---------GLK1(1)       <----------DOF2                        --------->ANAC58             <----   ------->TEIL <---------ARR11(3)                                 --------->ANAC58<---------ARR14(2) --------TOE2(3)--------->ARR11(3)       --------->ALFIN1     <-----------GT1      --------->ARR14(2)   taatgtatttccgattcagatattttagggcttttctacaaatgtgtgtgtgtgtatatatgtttaacgacgccttcatttctccgattcgattcagagc  29750900                                                                                  <----------DOF2                                                                                 ------>ZmHOX2a(2)                                                                               --------->ARR11(3)                                                                               <---------ARR11(3)                                                                        <---------ANAC58                                           <---------YAB1               <---------ANAC58                                   --------->TOE2(3)         --------->YAB1<-------GAMYB                               --------->REM1(1)     <------MYB46(1)    <---------ANAC46 --------->AHL20(1) ------ID1     <-----------HVH21   <----------DOF2   <------MYB83     <---------ANAC46   --------->ARR11(3)   gacaagatgagagccaaggtcagttttttatctacaactttagctatgcttctgtaggttttatcaaaaatgttgtgtgttgatctttaagtatattggg  29751000                                                                                                  <--                                                                                                -----                                                                                              >>>>>>>                                                                                       --------->ATHB12                                                                                   --------->ATHB12                                                                                   <---------AHL20(2)                                                                                  <---------AHL20(2)                                                                        --------->ARR11(3)    >>>>>>>                                                              <---------ALFIN1    --------->AHL20(2)                      --------->GLK1(2)                      --------->ANAC58     --------->AHL20(1)            <---------------AGL15                      <---------ZAT14  --------->ARR14(2)    >>>>>>>            --------------->AGL15                      --------->ZAT14  <---------ARR14(2)    >>>>>>>           <-----------------AGL3                     <---------REM1(1) <---------ARR11(3)   <------ZmHOX2a(1)           <-----------------AGL2                   <---------ANAC46   <------ZmHOX2a(1)    <--------  ----------->GT1<XXXXXXXXXXXXXXXXXXXMIR3434--------->TOE2(3)--------->ANAC58     <---------AHL20(1)   aattttgtgaattgctgtttatagaatcagtcgagtgagattgaaaccttggtttagtgtagcacgacctgtaggatattgaaatttattgattaggatt  29751100                                                                  <---------ZAT6 --------->GLK1(1)                                                ----------->GT1 -------YAB1                                                     <---------YAB1 ------>GT1                                                   <---------MYB52(1) >>ARR2                                                     <------MYB83 >>ARR1                                                     <------MYB46(1) >>ARR2                                                    --------->MYB59 >>ARR1                                              ---------->DOF2  <---------AHL20(2) -YAB1                      ---------->DOF2 --------->GLK1(1)<-------GAMYB   gtgatttctactcatggttttgctcttgccgaaagagaatgttgggattttcatcaaaagttcggttattgttaaatttgggatttgatataagagctct  29751200  Previous    Next  AGI:  At1g79070.1    Description:  SNARE-associated protein-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO23832.1) Range:  from: 29749563    to: 29750708    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g79075.1    Description:  other RNA Range:  from: 29750832    to: 29751735    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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