Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->DAG2                                                   --------->ANAC58                 ---------->DOF2                                         <------ZmHOX2a(1)                   <---------ANAC58                   --------->ANAC46     ----------->GT1               --------->AHL20(2)      <------                   --------->ANAC58     --------->ICU4                <---------AHL20(2)      <------                   --------->ANAC58  ---------->DOF2                  --------->AHL20(1)     <-------        --------->YAB1       --------->ANAC58      --------->ANAC58  --------->AHL20(2)   <----------DOF2 ---->YAB1      <-------TEIL --------->ANAC58---------->DOF2<----------ID1   <---------ANAC58<-------   agagaggtattcagaacatacacaccatatcaagctaatgaaaggattaaagctcgcaaaaaaaaacaaaaaaaaattgacttgcgaaaaggctttcgtc  29731500      <---------AHL20(2)                     --------->ANAC58     --------->AHL20(2)                      --------->ANAC58     <---------AHL20(2)                  --------->ANAC58                   --------->ARR14(2) -----HVH21                       ----------->GT1              <---------YAB1 -----TGA1             <---------TOE2(3) --------->ANAC58      --------->ICU4           --------->ATHB12 --ANAC58      ---------->DOF2--------->TOE1(3)              --------->YAB1 <-----------ARR10 --ANAC58  <----------ID1<------ZmHOX2a(1) ---------->DOF2 ------->TEIL    <---------CCA1(2)       <-   acaaaaattaaatgcgaaaaagaataaggaaaccataagtaaaacgaaagcccttaagatgaaccatgatcaaattcaaatctccctacatgatttcatc  29731600                   --------->ARR14(2)                   <---------ARR14(2)                   <-----------ARR10                   --------->GLK1(2)                                                          -------                  <---------GLK1(2)                                                 <------ZmHOX2a(1)         --------->AHL20(2)                                                       --------->LBD16     ----------->GT1      --------->ETT(2)                                       <---------LBD16    -  --------->At4g35610     <---------ETT(2)                          <---------At4g35610       <------  --------->ZAT2  --------->ARR14(2)                        --------->YAB1       <-----------RAV1(2)< -----ZmHOX2a(2)--------->LBD16--------->ANAC46 ----------->GT1     --------->At4g35610      --------   gatcagctagataaaatccagaatctcgtcgacacaaaacaaaacacagagagtgaatagaatcatcttaagctcccaaaactccaggagacattcccat  29731700                                                                                                    -                                                                                                    -                                                                                                   <- -------->AGL15                                                                                    <- -------->HSFB2a(2)        <------ZmHOX2a(1)                                              <---------ARR14(2) ---------AGL15        ---------->DOF2                           --------->TOE1(2)--------->ANAC58 -- ---------HSFB2a(2)    --------->MYB52(1)                      <-------TEIL       --------->ANAC58 <- --------->AGL2--------->ZAT6                         --------->ZAT18            <---------LBD16-----   ttctaggcattcaaataactctaactaaaggacacaaaatgaagaaataacaagagcgaacaagattcatacgagatgtcgagcacggagagtattcagt  29731800     --------->ANAC58     --------->ANAC58   <---------ANAC58   <---------ANAC58 -------->TOE1(2)                               <---------TOE2(3) -------->TOE2(2)                        <-----------------AGL1 --------ANAC58  --------->ANAC58        <-----------------AGL2                      --------->TOE1(3) --------ANAC58  --------->ANAC58--------->ANAC58                                    --------->TOE2(3) ------->At4g35610            <---------ZAT18   --------->MYB59         <---------WOX13(1)         <- --------At4g35610            <---------At4g35610              <---------ZAT14      ----------->RAV1(2) ------>HVH21    --------->ANAC46--------->ANAC58              --------->ZAT14 --------->At4g35610 --   gacctgcgagccaaaatcgaagccattgatggagcacccaaattccgatttaggttccttccttcttcactgcgattgatgagcaaacctgaacttccga  29731900                                                              <------MYB83                                                              <------MYB46(1)                                                             --------->MYB59                                                        <---------YAB1                                                       ------------>CBF                                                      --------->YAB1                                                      <-----------GT1                                                  <---------YAB1                                                  --------->ICU4                                                <---------RVE1(1)                               -----             --------->ZAT18                    <---------CCA1(1)                               -----        ---------->DOF2                        <---------ARR14(2)                              <-----        --------->YAB1             <----------DOF2<---------AHL20(2)                           ------       <---------ATHB12            ------>ZmHOX2a(1) <---------YAB1     ------------>CBF       ------ --------AHL20(2)               ---------->ID1 <---------ARR11(3)   <---------TOE1(2)        -------- ------->AHL20(2)    *TSS------>ZmHOX2a(1)     --------->ARR11(3)   --------->LBD16   <<<<<<<<<MYB2   ttaaaatcaataaagagccctaaaatcctattttgtcctttgagttgaagatattattacaatttggtccctggtacaatagtttttggttttccaaacc  29732000                                    ------>ZmHOX2a(1)                                   --------->TOE1(3)                       --------->MYB52(2)                                   --------->TOE2(3)                       ----------->GT1           <---------GLK1(2)      ----------------->AG                     --------->MYB111(1)           --------->ARR14(2)     ----------------->AGL1                   --------->MYB59       <---------LBD16      --------->GLK1(2)                              >>>>>>>>>>AtMYB44 -->GAMYB  <---------ARR14(2)  <----------DOF2                             --------->MYB46(2) ---->DEAR3(1)             --------->ARR14(2)                            <---------MYB52(1) ----MYB55(2)              <---------GLK1(2)                 --------->ANAC58 --->DEAR3(2)       <---------AHL20(2)   ------->GAMYB       --------->ANAC58         ----------->GT1 --->MYB46(3)       --------->AHL20(2)--------->MYB52(1)     --------->ANAC46    ---------->DOF2 ->ANAC46--------->LBD16   <---------ARR14(2)  --------->AHL20(2)       ------------>MYB.PH3(2)   gccgatagaaccggattttgaattaaacagattctttccttaaccgaaaataaacagaaatacacacaataaccagttagttacaaagtgctaaaactta  29732100                                                   --------->ANAC58                <------MYB83             <---------ICU4                      ---------->DOF2                   <------MYB46(1)            <---------YAB1                  <---------------AGL15     --------->TOE2(3)            <---------MYB52(1)         <---------HSFC1(2)           <---------ARR11(3)           --------->TOE2(3)           --------->HSFC1(2)<---------GLK1(2)        --------->MYB111(2)          --------->YAB1               <---------HSFB2a(1)          --------->ARR11(3)      <--------        --------->GLK1(2)          ----------->GT1 --------->ANAC58--------->RVE1(1)       ---------- <---------At4g35610     --------->ATHB12   <----------DOF2        --------->CCA1(1)  --------->ETT(2) --------->At4g35610  --------->ANAC46 --------->HSFB2a(1) ----------->GT1        --------->MYB111(1)   tttagctgagaatcgttattgcatacaccattggtgatggaaaattctttacaaagcaagattgtgaaaatatctcaatcgaagttggtagaccggtgat  29732200                                                                                 ------>NtERF2                                                                                --------->ANAC46                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                              --------->AtMYB61     -                                                                             --------->MYB46(3)------                                                                            ------>NtERF2    --------                                                                  --------->AHL20(2)      ------>ZmHOX2a(1)                             <---------TOE2(3)                    <---------AHL20(2)   <---------ATHB12                  --------->ARR14(2)                              <---------ATHB51    --------->ARR14(2)                  <---------ARR14(2)        --------->MYB52(1)  --------->YAB1<---------ALFIN1 ------ -MYB52(1)  --------->YAB1 --------->AHL20(2)    <---------ARR14(2)        --------->RAP2.6(2)------- ->GT1----------->GT1      <---------AHL20(2)    --------->ARR14(2)      ------>NtERF2<---------ARR14(2)   ttggagcaatgtaataagagtttccacaattaatgtgagattgcatcaacggattccatctatcgaaaataattcggccaccacgcccaatcctcccctg  29732300                                            --------->KAN4(1)                                            --------->MYB46(3)                                            <---------HSFB2a(1)                                            --------->HSFB2a(1)              <---------WRKY18(1)--------->ALFIN1      <---------At4g35610          ----------->GT1             --------->WRKY12    <-----------RAV1(1)   --------->At4g35610       <---------ARR14(2)   ------>MYB83            ------->TEIL    <---------KAN4(2)                     --------->ARR14(2)   ------>MYB46(1)         --------->ARR14(2)          <---------ZAT2            <---------MYB52(1) -------->DEAR3(2)         <---------ARR14(2)--------->KAN4(2)              --------->MYB52(1) --->LBD16 <-------GAMYB<---------YAB1   <------ZmHOX2a(1)------>NtERF2   --------->MYB46(3) --->RAV1(2) --------->WRKY38(1)<---------MYB52(1)     --------->ZAT2--------->HSFB2a(2) ----->HVH21 ----------->HVH21 --------->LBD16      <---------ZAT2   <---------HSFB2a(2)         ---- -->LBD16 <---------MYB46(3) <---------LBD16<---------KAN4(1)       <---------LBD16 <---------ANAC46   aaaccgacttggaggttgacctggtgatgaatccggtgttggaggaacaatccctgcagctgccagtttatcgggaaccagcggttttgtgaatagcatt  29732400  Previous    Next  AGI:  At1g79010.1    Description:  NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY). Identical to NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial precursor (TYKY) [Arabidopsis Thaliana] (GB:Q42599); similar to ATMLO14 (ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 14), NADH dehydrogenase (ubiquinone) [Arabidopsis thaliana] (TAIR:AT1G16700.1); similar to NADH:ubiquinone oxidoreductase-like [Solanum tuberosum] (GB:ABA81853.1); contains InterPro domain NADH-quinone oxidoreductase, chain I; (InterPro:IPR010226); contains InterPro domain 4Fe-4S ferredoxin, iron-sulphur binding; (InterPro:IPR001450); contains InterPro domain Alpha-helical fe Range:  from: 29729772    to: 29731921    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g79020.1    Description:  transcription factor-related. similar to transcription factor-related [Arabidopsis thaliana] (TAIR:AT1G16690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67072.1) Range:  from: 29732016    to: 29735324    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version