Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <----------DOF2                       <---------ARR11(1)                       --------->ARR14(2)                       <---------ARR14(2)                       ------->TEIL                      <---------ARR14(1)                    <---------ANAC58                    <---------ANAC55(2)                    <---------ANAC58                    --------->ANAC55(2)                                                            <-                    <---------ANAC55(1)                                                       <------                    <---------ANAC46                                                          -------                   --------------->AtSPL8                   <---------------AtSPL8          ---------                  <-----------GT1                           --------------->AtSPL8          <--------               <---------ICU4       <---------AHL20(2)  ------->TEIL                    --------->DAG2     <---------TOE1(2)<---------CCA1(2)         <-----------GT1                        ---------->DOF2   ttgttcgtagtttctcaaaattacgtatctttttgtgtttattttggtattttccatgtattttagtacattacaaaaatgaacagcataaaagtgagct  29693200                                                                    <----------DOF2    <---------AHL20(2)                                        <---------ZAT6 --------YAB1                                               <---------ANAC58 ---At4g35610                          <------ZmHOX2a(1)    <---------ANAC58 -->At4g35610             <---------TOE2(3)             --------->ATHB12                <-----------GT1 >ZAT18   <---------AHL20(2)<------ZmHOX2a(1)          <---------ATHB12         <---------YAB1 -ZAT18  <---------AHL20(2)----------->GT1            <---------ARR11(3)      ----------->GT1   tatgatttttttttatttttcatcaaatgaggaaatttgtaggagtcaaaactcaaaatcattcgtgttactttgaaaaattgttattttttactaaaat  29693300                                                                                         <-----------                            <---------AHL20(2)                                           <----------DOF2                            --------->AHL20(2)                                          <---------ANAC58                            --------->AHL20(1)                                      <---------ANAC58           <---------AHL20(2)                                                       <---------ANAC58           <---------AHL20(1)        ------------------------>ANAC81            <---------At4g35610           --------->AHL20(1)       --------->ANAC46                           ------>ZmHOX2a(2)           --------->AHL20(2)   <-----------GT1                               <------ZmHOX2a(2)  ------->MYC2              <---------AHL20(1)                       ----------->RAV1(1)<---------ANAC58  <-------MYC2        --------->ANAC46                            --------->ANAC58  <---------ANAC46  ------->MYC3        --------->ANAC58                            --------->ANAC46 <---------ZAT2  <-------MYC3        --------->ANAC58                            --------->ANAC58 --------->ZAT2   agcacgttgctaataaaatgttccaaggaataaattacaaaccagaaaaacaaaatacaaacctgcatgcgccacaagagatcgctgcttgctttaacat  29693400                                                                 <---------MYB52(1)                                                                <-----------TGA1                                                          <---------ATERF1(1)                 -------                                                       --------->DEAR3(1)                    <-------                       --------->DEAR3(1)            ------>NtERF2                          <--------                     --------->LBD16                 --------->LBD16                        ---------                   <---------LBD16           <----------DOF2    <-----------HVH21         <----------                 --------->ARR14(2)         <---------ANAC58   --------->ANAC46           <---------SPL7                 --------->GLK1(2)------->GAMYB     <---------DEAR3(1)           <---------TOE2(2)                 <---------ARR14(2)<---------LBD16============================HOX2a_HOX2a--------->ETT(2)         <---------ANAC46        --------->MYB46(3)<---------LBD16     <------ZmHOX2a(2) <---------ANAC58        <-----------------------TaNAC69(2)  <---------ANAC58--------->DEAR3(1)   <---------TOE1(2) ----AGL15      <---------GLK1(1)----------->HVH21------>ZmHOX2a(1)  <------ZmHOX2a(1)   <---------ANAC58   gaaaacgattgtcgtagaaaatccggcgagcctcaacgacggagtgtctttcctccggcgagcctccgtcaggatcaaactcccatgtttgtcgtccggc  29693500                                                                                     --------->TOE2(3)                                                                                   --------->SPL7                                                            --------->ANAC46       ------->TEIL                                                          <---------ALFIN1      --------->ANAC55(2)                                                       ------->GAMYB            <---------ANAC55(2)  <---------MYB46(3)                          --------->ARR14(2)               --------------->AtSPL8 -->LBD16                                    ------>ZmHOX2a(1)                 <-------TEIL --DEAR3(1)                       <---------MYB52(1)   --------->AtMYB61    <---------ZAT2  --------- -LBD16                     --------->At4g35610       --------->MYB46(3)    <---------At4g35610   --- >SPL7                   <------ZmHOX2a(2)   <---------CCA1(2)              --------->At4g35610   --- -HVH21  ----------->GT1 ===========================HOX2a_HOX2a           --------->ZAT18<---------CCA1(2)   gaagttgttagtagtgaataagtagggatcatctccgttcccttctcctatcttcaacctccacattacaaaaatgtgagctacgtacctcatttcttaa  29693600                                                     --------->ARR11(3)                                                     <---------GLK1(2)                                                   ----------->ARR10                                                <------MYB46(1)                                                <------MYB83                                               --------->MYB111(1)                                               --------->MYB46(2)                                               --------->MYB111(2)                                               --------->MYB59                                               --------->MYB55(2)                                               <---------MYB46(3)                                           --------->DAG2                                        <---                                           <---------TOE2(3)                       <---------ETT(1)                                         --------->CCA1(2)                         --------->DEAR3(1)     --------->TOE2(3)                <---------YAB1 <---------ARR11(3)            --------->DREB2C(2)   <-------TEIL                       <---------TOE2(3)                            --------->At1g77200 >TOE2(3)   --------->AHL20(2)        <---------TOE1(3)    ----------->GT1         --------->DEAR4(1) ------>ANAC58                   <---------TOE2(3)<--------P       --------->ANAC55(2)  --------->ANAC58 ------>ANAC58             --------->AHL20(1) --------->ALFIN1     <---------ANAC55(2)  --------->ANAC58   acgcatacattagattatataagtggaagtatattaagttaagataaggtgggtagatttttggtaaatatgtgataagaaaacaccgacaagaacatgt  29693700                                                                           <---------ANAC58                                                                           --------->ANAC58                                                                           <---------ANAC55(2)                                                                           <---------ANAC58                                                                           --------->ANAC58                                                       --------->ARR11(3)  --------->ANAC55(2)                                                       <---------GLK1(2)  --------------->AtSPL8                                                       <---------ARR11(3) <---------------AtSPL3    <                     ---------->DOF2           <---------ANAC46           <-------TEIL             <-        <---------YAB1                        <---------LBD16<---------ANAC58   <---------MYB59    --   <---------HSFB2a(2)                    <-----------RAV1(1)<---------ANAC58 ------->TEIL         --   --------->HSFB2a(2) <----------ID1    --------------->AGL15            --------------->AtSPL3   <-  <---------LBD16  --------->AHL20(2)    <---------------AGL15          <---------ARR14(2)    ------- --------GT1       <---------AHL20(2)<---------ZAT14 ----------->ARR10  --------->ARR14(2)<-------TEIL   tacttctgggatgatagagaattaaaagacaaaaatgagagtacttgttggggaaaagattttgcttaatcttggatacgtacttaactacatacatata  29693800                <---------ANAC58         --------->YAB1         <---------AHL20(2)         --------->AHL20(2)                    ------------>CBF ---------YAB1  <---------ANAC55(2)        <---------YAB1 --------AHL20(2)                        --------->YAB1      <---------YAB1  --------->AHL20(2) ------->AHL20(1)                        <---------ICU4     <---------AHL20(1) ------->AHL20(2)                       <---------ATHB12    --------->AHL20(1)  <---------AHL20(2) --------AHL20(1)          <-------TEIL------->TEIL         --------->AHL20(2) --------->YAB1    <--- -->AHL20(2)    <---------ANAC58    <---------YAB1        ------->TEIL   ------->TEIL        ------->TEIL   atataatacatttatattacttgagaacatacatagtcatgaatcatgatacaatacatgaatataatacatatgaacatataatattagatgtgtatgt  29693900                  <---------ANAC58        <--------HAHB4        --------->YAB1                                  --------->YAB1                            ---        --------->ATHB12                 <---------ALFIN1                                     ------>ZmHOX2a(2)        <---------ICU4                   ------->GAMYB <---------AHL20(2)                   ---------       <------ZmHOX2a(2)                --------->MYB46(3)   <---------ANAC58               <--------       <---------YAB1                   <---------MYB55(2)   <---------ANAC58              -------->HAHB4      <---------ARR11(3)        --------->ARR14(2) <---------AHL20(2)                      --------->YAB1 ----TEIL         <---------ANAC58 --------->ANAC46--------->AHL20(2)         <-----------HVH21 -----   tcatacacgatcattagtttgcttattcagtaagaatactcaaccaccttcatataaataatagcttattgcaaaatagaggtcatgacttaatgatcct  29694000       <---------WRKY12                                                    --------->ANAC58       <---------WRKY38(1)                ------>ZmHOX2a(2)                --------->ANAC46      --------->WRKY18(1)                 <---------MYB59                  --------->ANAC58 ------>REM1(1)                         <---------AGP1         <---------TOE1(3) >ARR11(3)                              ------->TEIL           <---------TOE2(3) -ARR11(3)----------->HVH21          <---------WOX13(1)   <-------GAMYB   --------->SPL7 ->ZmHOX2a(1)<---------ANAC46     <---------YAB1         <-----------RAV1(1)   ---------->DOF2 ------   acatcatggtcaatgacctgtgagttttgagacgttctgatggatctaacttcttctctctgttgaaggtttttcatacggcaaaggaactcgtctccta  29694100  Previous    Next  AGI:  At1g78950.1    Description:  beta-amyrin synthase, putative. similar to LUP1 (LUPEOL SYNTHASE 1), lupeol synthase [Arabidopsis thaliana] (TAIR:AT1G78970.1); similar to ATLUP2 (Arabidopsis thaliana lupeol synthase 2), lupeol synthase [Arabidopsis thaliana] (TAIR:AT1G78960.1); similar to CAMS1 (CAMELLIOL C SYNTHASE 1), beta-amyrin synthase [Arabidopsis thaliana] (TAIR:AT1G78955.1); similar to beta-amyrin synthase [Medicago truncatula] (GB:CAD23247.1); similar to beta amyrin synthase [Bruguiera gymnorhiza] (GB:BAF80443.1); similar to beta-amyrin synthase [Betula platyphylla] (GB:BAB83088.1); contains InterPro domain Terpenoid cylases/protein prenyltransferase alpha-alpha to Range:  from: 29689325    to: 29693566    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g78955.1    Description:  CAMS1 (CAMELLIOL C SYNTHASE 1); beta-amyrin synthase. similar to beta-amyrin synthase, putative [Arabidopsis thaliana] (TAIR:AT1G78950.1); similar to ATLUP2 (Arabidopsis thaliana lupeol synthase 2), lupeol synthase [Arabidopsis thaliana] (TAIR:AT1G78960.1); similar to lupeol synthase, putative / 2,3-oxidosqualene-triterpenoid cyclase, putative [Arabidopsis thaliana] (TAIR:AT1G66960.1); similar to beta-amyrin synthase [Euphorbia tirucalli] (GB:BAE43642.1); similar to beta amyrin synthase [Bruguiera gymnorhiza] (GB:BAF80443.1); similar to beta-amyrin synthase [Betula platyphylla] (GB:BAB83088.1); contains InterPro domain Terpenoid cylases/prote Range:  from: 29694046    to: 29699148    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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