Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------MYB52(1)                                                      ------>NtERF2                                                    --------->RAP2.3(1)                                                    <------NtERF2                                                   <---------ATERF1(1)                                                   ------>NtERF2                                                   <---------RAP2.3(1)      <---------ARR14(2)                          --------->DEAR3(1)      --------->ARR14(2)                          <---------DEAR3(1) ------>ANAC46                                   <------NtERF2 ------>ANAC58              ----------->GT1      --------->ATERF1(1) ------>ANAC58        <---------HSFC1(2)        <---------ATERF1(1) ----->LBD16          --------->HSFB2a(1)       <-----------HVH21                           --------- ->ARR14(2)           <---------HSFB2a(1)      <---------DEAR3(1)                        ------>ZmHOX2a(1) --ARR14(2)           --------->HSFC1(2)   <---------AtMYB61         <---------ARR11(3) <---------MYB59 ->GLK1(2)       <------ZmHOX2a(1)    --------->MYB52(1)   <---------ZAT6------>ZmHOX2a(1)  ---------   gagcaacgtattcgaaataggagaagcttcgagttaaatgaaacggaggtcgtcgccgctagtgtcatcaacatcctctgtttgtattgtcctaaccaaa  29676000                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                          <---------At4g35610                                                                     <------NtERF2        --------->At4g35610                                                                    --------->LBD16       <---------ZAT2                                         --------->RAP2.6(3)       --------->DEAR3(1)     --------->ZAT2                                        --------->MYB52(1)        <---------LBD16         <---------GLK1(1)                                 --------->YAB1                  <------NtERF2           ----------->ARR10     --------->HSFB2a(1)      --------->YAB1                     ------>NtERF2      --------->DAG2     <---------HSFB2a(1)      <---------ICU4                   --------->SPL7     ---------->DOF2   -    <---------KAN4(2)        <---------ATHB51                <---------SPL7 <---------TOE2(3) <------ -------->AG                 --------->ICU4                  <-----------HVH21  <---------YAB1------- >MYB46(3)            ---------->DOF2  ----------->HVH21   <-------TEIL  <---------WOX13(1)   <------   acagagaattttctaagaaagtttcaaagaaataatgagaagtaacggctacgaagagaaattcgtccgccggagattgacgatgaaaggtgagctccgt  29676100                    --------->MYB52(2)                  <---------MYB52(1)       <---------MYB52(1)    <<<<<<<<<TBF1      ----------->GT1  <---------MYB46(3)      <---------DEAR3(2) <---------ARR14(2)     --------->ATERF1(2) --------->ARR14(2) ------>HVH21  <---------TOE1(3)                           <---------AHL20(2) ------HVH21   <---------TOE2(3)                          --------->AHL20(2) --->LBD16  *TSS --------->TOE1(3)               <---------ARR14(2) ----->ZmHOX2a(2)--------->TOE2(3)               --------->ARR14(2) ---ANAC46  --------->ARR11(3)            <----------DOF2 --------->YAB1       --------->YAB1 -->ANAC55(2) <---------DOF5.7(2)  <<<<<<<<<TBF1 <------------CBF       ----------->GT1 ---ANAC55(2) --------->MYB52(1)<<<<<<<<<TBF1    <---------GLK1(2)  <------NtERF2   gatcgggccggtaagataacgttagtggttcttcttcttcttcactttgcagattgtctattatatgggccgaatggcaaaacataattttgggctaggc  29676200                                                                                 <------ZmHOX2a(1)                                                                           --------->MYB52(1)                                                                         <---------MYB52(2)                                                                         --------->MYB46(3)              --------->TOE2(3)                                        <-----------GT1             ----------->GT1                        <-----------GT1  <---------AHL20(2)    <---------AHL20(2)                      --------->YAB1       <---------AHL20(2)               <--   --------->YAB1 <---------YAB1           <---------YAB1        --------->AHL20(2)<---------YAB1<--- --------->AHL20(2)            --------->ATHB12   <---------AHL20(2) --------->AHL20(2)    <---------TOE2(3)   ccatataatattcaaatgttaatattccaaaattgatgggtatttttgataatttaactcgatctatataatttaacaaacgaggatgattttaagtttt  29676300                                                                                               ------                                                                                               <-----                           <-----------HVH21                                               <---------AHL20(2)                        <---------ANAC55(1)                                                --------->AHL20(2)                        <---------ANAC55(2)                                               --------->AHL20(2)                        --------->ANAC55(2)                                               --------->AHL20(1)                   --------->ATHB12                                     --------->MYB46(3)<---------AHL20(1)                  --------->ICU4                                  <------------CBF    *TSS<---------AHL20(2) <---------DAG2   <---------YAB1      <------------CBF    --------->AHL20(2)       ----------->GT1 <----------DOF2--------->YAB1       --------->ATHB12     <---------AHL20(2)     ----------->GT1----- ---------GT1   ----------->GT1 --------->MYB46(3)       --------->AHL20(2)      <---------ANAC46 --------GT1  <---------ZAT14<---------WRKY12  <------ZmHOX2a(1)<---------YAB1  <------ZmHOX2a(1) <--   taactttttaagtgagaatagtgattaagtgtcaacgactcattggataggatgtgtcataaaattagtattgaaccactgaggagtgaaaataaaatta  29676400                         --------->ARR11(3)                         <---------AHL20(1)                         <---------ARR11(3)           <---------AHL20(2)          --------->AHL20(2)          --------->AHL20(1)            <---------ANAC46          <---------AHL20(2)       --------->HSFB2a(1)          <---------AHL20(1)       --------->HSFC1(2)         --------->AHL20(2)        <---------HSFC1(2)  ----------->GT1        --------->AHL20(1)                                              <----------DOF2 --->AHL20(2)         --------->AHL20(2)----------->GT1 --------->ARR14(2)           <---------ZAT18 ----AHL20(2)     <------ZmHOX2a(1)<---------HSFB2a(1)  <---------ARR14(2)           --------->ZAT18 ----->DOF2--------->AHL20(2)<---------LBD16 ---------->DOF2                    <---------ARR14(2) -------TOE2(3) <---------TOE2(3)---------->DOF2    <---------LBD16            <------ZmHOX2a(1)    -   aaggtagaaaaattaatttaggaaaaaaatattcggaaagttctgtgaaaagtcttcggatttagaacggagacagcgagaggatagagcgcttcttcgg  29676500                                                       <---------At4g35610                                                    <---------MYB52(1)                                                    <------NtERF2                                                   <---------RAP2.6(3)                                                   <-----------HVH21                                                  >>>>>>>>>AtERF-4                                                  >>>>>>>>>AtERF-3                                                  --------->DEAR3(1)                                                  --------->RAP2.3(3)                                                  --------->RAP2.6(2)                                                  --------->RAP2.3(2)                                                 --------->ATERF1(1)                                                 --------->RAP2.3(1)                       --------->LBD16                      <-------GAMYB              <------NtERF2                            --------->HSFB2a(2)                    <---------DEAR3(1)          ------>NtERF2                             <---------HSFB2a(2)                    <---------ANAC46            <---------ATERF1(1)            <---------TOE1(3)                    <---------RAP2.6(2)        <---------ARR14(2)              <---------TOE2(3)<----        <----------DOF2                        --------->ARR14(2)       <---------GLK1(2) <---------ANAC46     --------->ANAC58<---------DEAR3(2)      --------->LBD16        <---------At5g28300  <---------LBD16     --------->ANAC58<---------MYB46(3)    <---------LBD16         <-----------GT1     <-----------GT1 -------->REM1(1) ------------>AtMYB77     ----------->RAV1(2)   <----------DOF2    --------->MYB52(2)   ctacaacaagctttcgctaatggcggtttccttctgatcactctcaccggagccgtcatcttctctgttttaccgatttttagggtttgtttccggataa  29676600                                    --------->HSFB2a(2)                                    --------->HSFC1(1)                                    <---------HSFB2a(2)                                    <---------HSFC1(1)                                 --------->ARR14(2)    ------>ZmHOX2a(1)                          ---                                 <---------ARR14(2)    =================HOX2a_HOX2a              <---                             <-------TEIL            <---------ANAC58                           -----                           <---------ARR14(2)<---------ARR14(2)     ----------->GT1             <----                           --------->ARR14(2)--------->ARR14(2)     <---------ANAC55(2)         <----                        <---------TOE1(2) --------->ANAC55(2)    <------ZmHOX2a(2)              -----                       <---------MYB52(1) <---------ANAC55(2)   --------->ARR11(3)              <----          <----------DOF2  <---------GLK1(2) ------->TEIL       <---------ARR11(3)              ----- -------GT1           <-------GAMYB<---------LBD16   <---------ANAC58                          <-----   actcttcgtatgctttttttttttcgttggattcgtttctggaaacgtatccatttcctgtctagagatcatgtgaatttctcttagaacagaactcaga  29676700           <---------At5g28300      <---------TOE2(3)                                                              ------>ZmHOX2a(2)     ---------->DOF2                                                               <---------ARR14(2)    <---------AHL20(2)                                                             --------->ARR14(2)    --------->AHL20(2)                                                             --------->AGP1 --->ZmHOX2a(2)                                                                    <---------AGP1 ---ZmHOX2a(2)                                                                     <---------ARR11(3) ---->ARR14(2)                                                                     --------->ARR11(3) -----ARR14(2)         <-------TEIL                                               <---------CCA1(2) -----ARR11(3)   <---------ANAC58                   <---------ANAC46             ----------->ARR10 ---->ARR11(3)   <---------ANAC58                   <---------ANAC58  --------->TOE2(3) -----AGP1<-----------GT1--------->TOE2(3)          <---------ANAC58<---------ARR11(3)            <-- ---->AGP1--------->MYB52(1)    <---------LBD16  <---------MYB52(1) --------->ARR11(3)          <---- ----CCA1(2)    <---------MYB46(3)       ---------->DOF2           --------->GLK1(1)<------ZmHOX2a(2)   tctaaattaaagtaacggtgcttgattcattaaactcggaatgcaaagtcccttgcgttttattcactgaaatcttagtcgattagatcttgaggtctgt  29676800                                      <---------ARR14(2)                                      --------->ARR14(2)                                            <                <---------LBD16     --------->WOX13(1)                                              -          <---------DAG2         --------->ANAC58                                                   <          <----------DOF2        --------->ANAC46          ---------->DOF2              --------->TOE2(3)        <---------TOE1(2)  ------>ZmHOX2a(2)             <---------YAB1                 <---------MYB59 -------MYB46(3)--------->LBD16  --------->ANAC58      --------->YAB1       <---------ZAT14        -- -----MYB52(1)<---------LBD16  ---------->DOF2        --------->ICU4       <----------DOF2     <-----   ttgttaatcgcacttttctggggaattgatcgtagaagcaattacgctcatgggaaatgatgaaagttatagctaaactttactgtagaaccttactctg  29676900  Previous    Next  AGI:  At1g78915.1    Description:  binding. similar to unknown [Populus trichocarpa] (GB:ABK95143.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 29672458    to: 29676112    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g78920.1    Description:  AVP2 (ARABIDOPSIS VACUOLAR H+-PYROPHOSPHATASE 2). Identical to Pyrophosphate-energized membrane proton pump 2 (AVPL1) [Arabidopsis Thaliana] (GB:Q56ZN6;GB:Q9LDJ4;GB:Q9MB70;GB:Q9ZVB1); similar to vacuolar-type H+-translocating inorganic pyrophosphatase, putative [Arabidopsis thaliana] (TAIR:AT1G16780.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ66476.1); similar to H+-translocating pyrophosphatase [Zea mays] (GB:ABK51382.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41672.1); contains InterPro domain Inorganic H+ pyrophosphatase; (InterPro:IPR004131) Range:  from: 29676386    to: 29681885    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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