Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------At5g28300                                                      <---------DOF5.7(2)                                              --------->TGA2(2)                                             <-----------TGA1                                            --------->TGA2(1)                                            <---------bZIP60(1) <------MYB83                               <---------TGA2(1) ----------->GT1                            <---------O2 <---------ANAC46                           --------->bZIP60(1)                               ------- <------MYB46(1)                            --------->ANAC46                                  ------>MYB46(1) ---------MYB46(3)                          --------->O2                                      ------>MYB83 -------->MYB55(2)                         <-----------STF1                                 <-------- --------MYB55(1)                          ----------->STF1              --------->MYB46(3) <-------- -------MYB52(1)                          <-----------GT1    ----------->HVH21              --------- ----GAMYB                            <----------DOF2<-----------GT1   --------->MYB52(1) ------->TEIL ---At5g28300                <---------ARR14(2)   <---------ICU4     ------>ZmHOX2a(1)  --------->ZAT14 ----GT1     --------->MYB52(1)     <---------At4g35610   <---------MYB52(1)            <---------ZAT18 -DOF2     <---------MYB52(2)--------->ARR14(2)  --------->ICU4     --------->TOE2(3)   <---------ZAT14   gttgggtaaaatcactaacggatagttttcgaattctcagcttttgacgtcatagttaccgttctgacatcctcaacggctaactcacagtgaacctact  29655000                                                            <---------ATHB12                                                        ------->GAMYB                                                      -------->P                                                      ------>MYB46(1)                                                      >>>>>>>>>MYB98                                                      ------>MYB83                                                    <---------ALFIN1                                              <------ZmHOX2a(2)                                             --------->ARR14(2)              <-----------GT1        -    <---------ZAT18                          <---------ARR14(2)        <---------TOE1(3)            - ->P--------->ZAT18    <---------YAB1     <---------HSFB2a(2)    --------->ICU4                <----- -MYB111(1)   ---------->DOF2         <----------DOF2<---------ALFIN1  <---------TOE2(3)    <-------- -MYB59    <----------DOF2<---------YAB1  --------->HSFB2a(2)--------->AHL20(2)            --------->AHL20(2) >TOE1(2)  --------->TOE2(3)   --------->ATHB12------>ZmHOX2a(2) ----------->GT1         --------->AHL20(2)   acctagttcgctactttaaagtcgtattattcttgatgggctttcgagatcggcccaacccaatgaaatgtttaaagttttacaagtccaatataaaatg  29655100                                          <---------ICU4                                          <---------AHL20(2)                                <--------                                         --------->AHL20(2)                                 ---------                                       --------->YAB1                                      <---------GLK1(1)                                     --------->AHL20(1)                                 --------->LBD16                                <-------TEIL                             <---------WOX13(1)--------->GLK1(1)  --------->YAB1            <---------TOE1(3)                       <----------DOF2    --------->ANAC58  --------->TOE2(3)         <---------TOE2(3)                      <---------ANAC58    --------->ANAC58 -------->ANAC58       <------MYB83 --------->YAB1                 <---------ANAC58    --------->LBD16 -------->ANAC58       <------MYB46(1)<---------YAB1 <------NtERF2 <---------ANAC46   <---------LBD16 -----ID1          --------->ARR14(2)<---------AHL20(2)     <---------AHL20(2)   <---------ATHB12 -AHL20(2)         <---------ARR14(2)--------->AHL20(2)     --------->AHL20(2)   ---------->DOF2   acaagcttaatggataaactggatttggttaaggtccattataataaatatgggcctcacatataaatggctttgatggaccaataagcccggaaatctg  29655200                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                             <-------TEIL                                                                                           --------->ARR14(2)                                                                                           <---------ARR14(2)                                                                                         ---------->TaMYB80                                                                                     --------->LBD16  --------->GLK1(2)                     --------->AHL20(2)                          <---------ANAC58  <---------ARR11(3)                   --------->AHL20(2)          ------------>CBF <---------LBD16  <-----------ARR10                    <---------ATHB12         <--------P          <---------ANAC46  --------->ARR11(3)        ----------->GT1                    <-------GAMYB        <---------ANAC58 -ARR14(2)               <---------MYB52(1)          <----------DOF2               <---------LBD16 >GLK1(2)              <-----------RAV1(1)        <---------ARR11(3)          <---------TOE2(3)------   agaaaatctatgtaatattcgaaaactgttgggaaaaatcaataaataagtagaactttagggagggttagcaataaacaaaggttgcgggaaaatacgt  29655300                                                                                    <-------TEIL                                                                                   --------->CCA1(2)                                                                                  --------->ARR14(2)                                                                                  <---------ARR14(2)                                                                                  <---------GLK1(2)            --------->ARR11(3)                                                   --------->At4g35610   ---------->DOF2                                                              ----------->ARR10 -->ANAC55(2)                                                          <-----------ARR10 -->ANAC46  <---------ARR11(3)                                         --------->ARR11(3)          -- ---ANAC55(2)       <---------AHL20(2)                                 <---------ARR11(3)         --- -->ANAC55(1)  <---------AHL20(2)                       *TSS        <---------AHL20(2)          ----- -->ANAC58  <---------AHL20(2)                       ---------->DOF2--------->AHL20(2)    --------->CCA1(2) ---->GT1   --------->AHL20(2)                  --------->CCA1(2)  --------->YAB1<---------At4g35610 -->ANAC58  --------->AHL20(1)              <---------TOE2(3)      --------->AHL20(2) <---------HSFB2a(2) --->TOE2(3)<---------AHL20(1)             ---------->DOF2 --------->GLK1(1) <-----------HVH21 ------   aaaataaaagctaatatattatttgattcgtccagagttgaattttaaagatagagaaaggaaatcgaattaaaatcttcgtcagattcgagagacgacg  29655400                               --------->ZAT2                               <---------ZAT2                                           --------->At5g28300                               --------->At4g35610                                     ----------->GT1                               <---------At4g35610                           <---------ICU4       ---                            --------->At4g35610                        ----------->GT1--------->ZAT6                            <---------At4g35610            <---------ZAT2   --------->ICU4        ---    ------->TEIL         --------->At4g35610               --------->At4g35610      ----------->RAV1(1) ---->NtERF2           --------->YAB1                      --------->ZAT2   <---------YAB1       <--- ------>DEAR3(1)      <---------YAB1               --------->ZAT6      <---------ANAC55(2)      <---- ->NtERF2           --------->YAB1            --------->TOE2(3)        --------->ANAC55(2)     <----- --->DEAR3(1)  --------->HSFB2a(2)            --------->TOE1(3)   <---------ETT(2)  --------->MYB52(1)   acgacgaacttgttgttctcgattatcatcagcagctcccttcaaaaaccctaactctctgagctcgatcgacaagtgataatggccaacagtaatttgc  29655500       --------->YAB1 ------>LBD16                                                ------>ZmHOX2a(2) --->NtERF2                                        --------->ZAT6 ------ANAC46                            <---------ANAC46   --------->GLK1(1)                    <--- -----LBD16 <---------TOE2(3)            <---------ANAC58   <---------GLK1(1)                    <--- ----At5g28300                           <---------ANAC58   <------ZmHOX2a(2)          <----------DOF2   cgcgaagaatcatcaaggtttgttttccaatctcgatttgattccttggacaaactctaccgatctctgtttctatcggagtctcttaacttttgttttc  29655600                                       ----------->GT1            <------ZmHOX2a(1)         --------->LBD16      ----------->HVH21               ----------->GT1      <---------YAB1                <---------LBD16     ------>ZmHOX2a(2)             ------->TEIL                   <---------ANAC58     ==============HOX2a_HOX2a   <---------ZAT14                  <---------ANAC46                <--    <------ZmHOX2a(2)     <---------At4g35610                  ------>ZmHOX2a(1)                -----    ===============HOX2a_HOX2a   --------->ZAT14     <---------AHL20(2)                        <----- ------ANAC58             <---------ZAT2             --------->AHL20(2)          <---------ZAT6------ ------ANAC58             --------->At4g35610      <----------DOF2<---------ANAC58           <-------   cttgcgatctgataggaaactcaacgtctgctcagtgaaccgggtaaaaaactctttaattcgtcctgccttgttgagttatagtgttgattttgagatg  29655700                                     ----------->HVH21                                   <---------ANAC55(2)                                   --------->ANAC55(2)                                   <---------bZIP60(1)                                   --------->bZIP60(1)                                   <---------O2                                   ====================================MYC_MYB                                   --------->O2                                   <---------ANAC58                                   <---------TGA1a                                   <---------ANAC58                            <---------AHL20(2)                                   --------->TGA1a                    ----------->GT1    --------->YAB1        --------->YAB1       ------>ZmHOX2a(2)                        <---------ZAT6    <---------YAB1 -------YAB1   <-------GAMYB<------ZmHOX2a(2)                    <---------REM1(1)   <---------YAB1 ---->YAB1     ==============================MYC_MYB           <-------GAMYB   --------->AHL20(2) ----YAB1     <---------MYB46(3)   <---------bZIP60(2)        <------MYB83  --------->ARR11(3) ----->GT1<---------YAB1   <---------ARR14(2)                 <------MYB46(1)--------->CCA1(2) --At4g35610 <---------YAB1--------->ARR14(2)                --------->MYB59<---------ARR11(3)      <   ataatatcaattttgatggttgaattgtggatccgagacgtgaccgtccatggagtttggaatttggttgtagagtaagatttaaatctgattataactt  29655800                 <---------At4g35610                 --------->At4g35610                 --------->ZAT2                 <---------ZAT2           <------MYB83           <------MYB46(1)                             <---------LBD16          <---------MYB46(3)                   <------ZmHOX2a(1)         <---------WOX13(1)                   ----------->GT1                                       <       --------->ATHB12                      <---------TOE2(3)             <---------YAB1       <----      <---------YAB1   --------->LBD16   --------->At4g35610            <---------YAB1          -----  --------->ATHB12    --------->LBD16    <---------At4g35610            --------->ICU4 --------->ANAC46 ---------WOX13(1)   <---------LBD16     ----------->RAV1(2)      <---------TOE2(3)  ------>ZmHOX2a(1)   cgattgatttgattggtgcagctcccggtataagtgcctctccatctgaggataatatgcggtatttcaacgttatgattcttggtcctacacaatcacc  29655900  Previous    Next  AGI:  At1g78870.1    Description:  UBC13A/UBC35 (UBIQUITIN-CONJUGATING ENZYME35); protein binding / ubiquitin-protein ligase. similar to UBC13B/UBC36 (UBIQUITIN-CONJUGATING ENZYME 36), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT1G16890.2); similar to ubiquitin-conjugating enzyme 1 [Arachis hypogaea] (GB:AAZ20286.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 29655356    to: 29657410    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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