Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------At4g35610                                --------->At4g35610                                   --------->ARR11(3)                          ------>NtERF2                                      <-------TEIL                         --------->DEAR3(1)                               --------->At4g35610                       ------>NtERF2                  --------->ETT(2)    <---------ZAT2                       --------->LBD16            <---------GLK1(1)       <---------At4g35610                       <---------ATERF1(1)        --------->GLK1(1)     <-----------RAV1(2)         <                      <---------DEAR3(1)         <---------ARR14(2)   ----------->RAV1(1)         ---                    ------>ZmHOX2a(1)            --------->ARR14(2)  ----------->HVH21<---------ARR11(3)    <---------GLK1(1)<---------LBD16             <---------GLK1(2) --------->ANAC46  <---------GLK1(1) ->ZmHOX2a(1)  <---------At4g35610             --------->LBD16 --------->ARR11(3)    --------->GLK1(1) >ID1       <-------TEIL ----------->HVH21   <---------LBD16   <---------ARR11(3)    <---------CCA1(2)   tcatcgatttccgattcatctcctccggcgactgagctatcttcttcaccggattttcgaccgaagaactcgcgacaggtgcgatggatatctctctgaa  29635000         <------NtERF2        --------->LBD16        ------>NtERF2       --------->RAP2.3(2)       --------->RRTF1(3)       --------->ANAC46       --------->DREB2C(2)                                                      =================HOX2a_HOX2a       <---------ATERF1(2)                                                      ------>ZmHOX2a(2)       --------->ATERF1(2)                                                     ==================HOX2a_HOX2a       --------->RAP2.3(3)                                                     <------ZmHOX2a(2)       --------->RRTF1(2)                                                     --------->AGP1       --------->RAP2.6(2)                                                    <---------ARR14(3)       --------->DEAR3(1)                                                     --------->ARR14(3)      --------->RAP2.3(1)                                                     <---------ARR11(3)      --------->ATERF1(1)                                                     --------->ARR14(2)      --------->ERF1                                                --------->ANAC46          =======      --------->ORA47(2)                                            ------>NtERF2            --------     <---------ATERF1(1)                                            --------->LBD16          <-------     <---------RAP2.3(1)        <------NtERF2                      <---------RAP2.6(2)    <------ZmHOX2a(1)    --------->ANAC46            <---------RAP2.6(3)       <---------ANAC46    <---------ARR14(2) --------->ARR14(2)            --------->RAP2.6(2)     --------->ANAC58       --------->ARR11(3) --------->KAN4(2)            ----------------->AGL1   --------->ANAC46    --------->HSFB2a(2)<------ <---------ARR14(2)          ------>NtERF2             --------->ANAC58  --------->AtLEC2------------ ----------TaMYB80        ------>ZmHOX2a(1)         <---------REM1(2)------>NtERF2 --------->LBD16 ------>YAB1       <----------DOF2                 <-----------GT1<---------LBD16 <---------ANAC46   gcatattcgccgccaatttctctttctcctcggccgaaataggtcgagtctttttacacggcctgtattccggccatccagatcccgtagaaggaggctg  29635100           <---------ANAC58        --------->WRKY12        ----------->HVH21     --------->ATHB12   <-----------HVH21  <---------bZIP60(1)  <---------TGA1a  --------->TGA1a  --------->ANAC58  --------->ANAC46  --------->O2                                                                                -------  --------->ANAC55(2)                                                          <---------TOE1(3)  <---------ANAC55(2)                                                          <---------TOE2(3)-----  --------->bZIP60(1)                                                       <---------YAB1    <------  --------->ANAC55(1)                                  <---------YAB1     --------->ATHB12--------->CCA1(2)  --------->ANAC58                                  <---------YAB1       <---------YAB1  <---------ARR14(2)  --------->bZIP60(2)                            ---------->ID1 --------->GLK1(2)     --------->HSFB2a(2) <-------TEIL                                   <-------GAMYB  --------->ARR11(3)    <---------LBD16 ===========MYC_MYB                            --------->MYB55(2)      ============================== ->At4g35610         --------->HSFB2a(2)       <---------MYB46(3)      <------ZmHOX2a(1) --------->ARR14(2) --At4g35610         <---------HSFB2a(2)     <---------MYB52(1)<---------ARR11(3)  <---------ARR14(2) ----CDC5  <---------ANAC58              <------ZmHOX2a(1)     <---------GLK1(2)  <---------GLK1(1) - ----------->TaNAC69(2)       --------->GLK1(2)--------->MYB52(2)    <---------TOE2(3)<---------HSFB2a(2)   aggcacgtcattgacgggccattctcgacccgaatcaggcctaggacgtttgttgttattgtagagattttgaggattattagggtttctggatatgatc  29635200                                                 ----------->GT1                                              <------NtERF2         <---------At4g35610                 ------>NtERF2         --------->At4g35610                <---------ANAC46     <-----------GT1                       <---------LBD16                     ----------->GT1     --------->MYB52(1)                    <------NtERF2                       <---------ANAC58 -->ARR11(3)                              <---------RAP2.3(1)                  <---------ANAC58 ->ZmHOX2a(2)                             <---------DEAR4(2)       <-------GAMYB ---ARR11(3)                             <---------RAP2.3(3)      --------->MYB52(2) ==HOX2a_HOX2a                           <---------DEAR3(1)       <---------MYB46(3)  <-----------RAV1(2) -------->ZAT14                         --------->SPL7  --------->MYB59        <---------ANAC46   tgtggagtaacagctccatagcgagagagaagttgcaaatcagacggcgggatgtaattcggtctgggtcgttgaatcgggtcgtgaatcaggttgaaat  29635300                        <------ZmHOX2a(1)                       <------MYB46(1)                      --------->MYB111(2)                      --------->MYB111(1)                     <--------P                    <---------MYB52(1)                  --------->HSFB2a(2)                  <---------HSFB2a(2)                 <---------ANAC46                 <---------LBD16                                                                 <---                <---------LBD16                       <-------TEIL                              <----             <<<<<<<<<MYB2                           <--------P                               -------           <------MYB46(1)  --------->ARR11(3)    <---------TOE2(3)          <-------TEIL    <-------TEIL           <------MYB83<------MYB83               <---------TOE1(3)<---------ANAC58      --------->ICU4          <---------AtMYB61<------ZmHOX2a(1)   --------->ALFIN1    <---------ANAC58 ----------->GT1   tagggctagggattggttttcgggtaggaggaccttgatgccagagggagtgaaggtagattacttcttgcttcagagattcatcgtcgtaaatattcat  29635400                                                                                       <----------DOF2                                                                                    ------>ZmHOX2a(2)                                                                                   <---------GLK1(1)                                                                                   <<<<<<<<<GATA-2                                                                                   <<<<<<<<<GATA-3                                              *TSS                                 <<<<<<<<<GATA-1                                             <---------MYB52(1)    <-----------TBP <<<<<<<<<GATA-4                                           <---------ANAC58  --------->ZAT14       <------ZmHOX2a(2)                             --------->ARR14(2)              <---------ZAT14      <---------AGP1                             <---------ARR14(2)              <---------ZAT18      --------->ARR11(3)                             --------->ARR11(3)           <---------ZAT6   <---------AHL20(2)                             <---------ARR11(3)    <---------YAB1<---------DAG2   <---------ARR11(3)  <----------DOF2         >>>>>>>>>TBF1    <---------ANAC58  --------->ZAT18<---------YAB1       ---- ------ICU4           <------ZmHOX2a(1)   ----------------->AG   <----------DOF2 <---------CCA1(2) -----YAB1      <---------At4g35610       =========================================================== -->YAB1     <-----------------AGL1    <----------DOF2<---------YAB1     <---------AHL20(2)     <----   cattctttgtttgttttccgatgaggaagaagaacttcaagctttccgtttttgtcattagagttcactttttatattattttagatctcttttctctta  29635500                                                         ------>MYB83                     <-----------GT1                     ------>MYB46(1)          <-----------GT1                              <---------MYB46(2)      --------------->AGL15                            <---------MYB111(1)    <---------At5g28300                                <---------MYB59   <-----------GT1  <-----------GT1          <---------YAB1   ------>ZmHOX2a(1) -------->CBF      <---------AHL20(2) <---------DAG2  --------->ANAC55(2) =====================MADS_MADS       <----------DOF2 --------->ANAC46                          <---- -------GT1<---------At5g28300  <----------DOF2     <-----------GT1--------->GLK1(1)            <----   acaatttaccatttactgcattttaacgcctaaactttcactttattatgtttttcacctaatcctctgatttcttacaagttagacccaaaacttctaa  29635600                                                                                 <---------ALFIN1                                                                                <---------ALFIN1                                                                               <---------ALFIN1                                                                            <---------ALFIN1                                                                         <---------ALFIN1                     --------->RVE1(1)                                  <---------ALFIN1                    --------->GLK1(2)                                  <---------ATERF1(1)                    <---------ARR11(3)                 <---------At5g28300<---------ALFIN1        <----------DOF2         <-----------GT1    <----------DOF2     <---------ALFIN1 -----TOE2(3)       --------->ARR11(3)        --------->LBD16         --------->ANAC46 -----TOE1(3)      <---------GLK1(2)       ------>ZmHOX2a(2)          <---------ALFIN1   cgttttaaaacttttaccccaaaatctctgtttttaacaagctgatccctgaacttttactgtgcataatcccccccccctcccccctctaattctctga  29635700                                        <----------DOF2                                        <---------DAG2                 ----------->HVH21      <---------------AGL15           <-----------------------TaNAC69(2)<---------LBD16              ----------->RAV1(1)           <-------TEIL                 --------------->AGL15          --------->ANAC58          --------->ARR14(1)      --------->YAB1                       --------->ANAC58          --------->CCA1(2)    --------->WOX13(1)          <---------YAB1 --------->RAP2.6(2)         --------->ARR14(2)  <------ZmHOX2a(2)            --------->TOE2(3)                <---------         <---------ARR14(2) <---------ARR11(3) ----------->GT1       <--------P           --------->AHL20(2)         --------->ARR11(1) --------->ARR11(3) <----------ID1 <---------YAB1      ----------->GT1   agaacattttagatacgaattgacatggaagatcaatcgaaactttatggggaaaaaaaacattataagaggtaagccacaatattgtaaaatttactac  29635800                                                             --------->LBD16                       --                                                             ------>NtERF2                  <--------                                                            <---------ETT(1)              <---------ANAC58 <---------ANAC55(2)             <---------ALFIN1          <---------LBD16<---------ALFIN1<---------ANAC46 --------->ANAC55(2)          --------->PCF2   <---------MYB52(1)       <---------ALFIN1  <---------ANAC58 --GT1                   <----------DOF2    <---------ATHB12--------->ANAC46           --------->ALFIN1   attacatgttctcaaattttctaaactctttagccccacttcttcaatcgtttgcctcttctccggcaatacgtccacacttcttcgatgtgtcgtctct  29635900  Previous    Next  AGI:  At1g78810.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN60296.1) Range:  from: 29633162    to: 29635446    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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