Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     ------>ZmHOX2a(1)                                                  <---------MYB59                                                 ------>ZmHOX2a(2)                                                <------ZmHOX2a(2)                                               --------->ARR11(3)                                               --------->AGP1        <---------HSFB2a(1)                    <---------ARR14(2)       <---------ARR11(3)                      --------->ARR14(2)       --------->ARR11(3)            <---------ANAC46  --------->LBD16                    <---------ANAC58 <---------ANAC46                    ----------->GT1<---------ICU4 ------->SPL7                        <---------ANAC58      --------->AtLEC2 ----->TEIL                         <-----------------------TaNAC69(2)----------->GT1      <---------LBD16 ----->ZAT18             ----------->GT1       <---------ARR11(3)    <---------TOE2(2)    <---------ANAC46 ---->ALFIN1   --------->PCF2   <---------ICU4 <---------GLK1(2)     <---------TOE1(2) <---------GLK1(2)   gtaccgcgaaatcttcgggcccaaatgtgcttaaaaatggcgtgaatcagatcctaattccatgaaaatcgaaggtaagaagaatgttagaatcgtggaa  29629600                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 <---                                <---------O2                                             <---------MYB52(2)                                --------->O2                                            --------->At4g35610                                --------->ANAC55(2)                                     <---------At4g35610                                <---------TGA1a                                        ------->TEIL                                <---------ANAC58                                     --------->LBD16                                <---------ANAC55(2)                                 --------->ANAC46             <---------------------WRI1                                            <---------LBD16         --------->MYB52(1)     <---------ANAC58          --------->ARR11(3) <---------ANAC58    <---       ===================================bZIP_DOF      <---------TOE2(2)    <---------ANAC46    ----       ---------->DOF2          --------->TGA1a         <---------TOE1(2)    <---------ANAC58   -----    ----------->GT1    ===================bZIP_DOF --------->GLK1(2)      ----------->HVH21 <--------   ----------->GT1     ---------->DOF2            <---------GLK1(2)       ----------->TGA1 --------->MYB52(1)   ttgagacgataaaacggcgaagtagaaaaggaagacgtgagaagagattacagaatcgaaggtattgttcgcgtccatgacgttttccgcatctaacgaa  29629700    ----------->GT1   ------>ZmHOX2a(1) ------HSFB2a(1) ----->HSFC1(2) ----->HSFB2a(1) ----->At4g35610 ------At4g35610 ------HSFC1(2)               ----------->GT1 ----->ZAT2                   --------->At4g35610                    --------->YAB1 -->TEIL                    --------->ZAT18              --------->DAG2 --------->YAB1 -TOE2(3)           --------->MYB52(1)                  ---------->DOF2 --------->ATHB12   gcttcctggtgaaaaaaaaaaaaaacggagaccgctaaaaactcagaaactattttgaaaaaggaaaactagaatcatggaaaatcacagccattacata  29629800                                                                                                   --                                                                                             --------                                                                                             ------>NtERF2                                                                                            ---------                                                                                            ---------                                                                                           --------->ATERF1(1)                                                                                           <------NtERF2                                                                                           --------->RAP2.3(1)                                                                                           --------->RRTF1(1)                                                                                          <---------ATERF1(1)                                                                                          <---------DEAR4(2)                                                                                          <---------ORA47(2)                                                                                          ------>NtERF2                                                                                          <---------RAP2.3(1)                                                                                          <---------ERF1                                                                                         <---------DEAR3(1)                                                                                         <---------RAP2.6(2)                                                                                         <---------RAP2.3(2)                                                                                         <---------ANAC46                                                                                         <---------RAP2.3(3)                                   --------->ANAC58                                      --------->ATERF1(2)                                   --------->ANAC58                   <------NtERF2     --------->ATERF1(1)                                   --------->ANAC46                  ------>NtERF2      <---------ABI4(1)                              <------ZmHOX2a(2)                    --------->RAP2.6(3) <---------bZIP60(2)                             --------->ARR11(3)                   ------->GAMYB        <---------ATERF1(1)                             <---------ARR11(3)                  --------->MYB46(3) --------->ALFIN1                         ---------->DOF2             --------->ARR11(3)      --------->CCA1(2)<------NtERF2   caaaatcacaaaaactattctacaattgaaagatcacaagctatatataccttgagatgttgatacaacgacggcaacgatatacagtgaggcggcgaca  29629900      --------->At4g35610 <---------GLK1(1) --------->ZAT2                                                           --------->ANAC58 --------->At4g35610                                                      --------->ANAC58     ------ <---------ZAT2                                                        *TSS    --------->AHL20(2) ----->GAMYB                                                          --------->CCA1(2)  ----------->GT1 --->RAV1(1) --------->ATHB12                                        <----------ID1<----------ID1 >DEAR3(1)   <------ZmHOX2a(1)                                   ---------->DOF2   --------->ANAC46 -->HVH21  <---------TOE2(3)                                 <----------ID1    <---------AHL20(2)----   acgagctccgatgaaggattggagggaagagaactgtgtaatttggaagacgaagattgaagaaggaaaaagagacaagaattaaacgacaacgtataaa  29630000                         --------->ANAC58                         ------>MYB83                            --------->YAB1                         >>>>>>>>>MYB98                        <------------CBF       ----------->GT1   --------->ANAC58               <-------MYC3                  ------>ZmHOX2a(2)       <------MYB46(1)   -------->P                     ------->MYC3                --------->ARR11(3)       <------MYB83      ------>MYB46(1)               --------->O2            <<<<<<<<<<MYB80 ---->DOF2              <---------ALFIN1<---------At4g35610 ------------>CBF  <------MYB46(1) ------->GT1   --------->YAB1         ---------->CDC5  <---------O2           <------MYB83         <-   agtaaaatttggtgaaataataagcccaacccattaagactcagcccatagaatgccacgttgtcaattgtcatgttgtttggtttgatctctcagacgc  29630100                                                           -------->P                               -                                                           ------>MYB83                             <                                            <---------ANAC58                                        -                                            <---------ANAC46                          --------->ANAC46                                   ------>ZmHOX2a(1)       --------->MYB52(1)       --------->ANAC46<                               --------->ARR11(3)          ------>MYB46(1)       --------->ARR14(2) -                       --------->ATHB12     <---------ANAC58  --------->ANAC46  <----------DOF2     <                      <---------ATHB12  <----------DOF2   --------->MYB55(1) --------->ANAC58      <-                 ------>ZmHOX2a(1)--------->TOE1(2)      <---------MYB59     --------->ANAC58      <-       <---------At4g35610 <---------AHL20(2)            <---------MYB111(1) --------->ANAC46    <--- ---------DOF2  --------->TOE2(3) --------->TOE2(2)      <---------MYB46(2) --------->ZAT18      <---   gcttcatttagctcatttcctcaaatgatttaaaatcctgcgattttcgtggtctataacctacccgaattgatgaaacgcgctatacgcgctgttcatg  29630200                                                                                        ------>ZmHOX2a(1)          <---------ZAT6                                                               --------->TOE2(2)       <--------P                                                                      --------->TOE1(2) --------->ALFIN1                                                               <---------AHL20(2) ------>PIF5                                                                --------->AHL20(1) -------MYC2                                                --------->At4g35610--------->AHL20(2) ------>MYC3                                                <---------At4g35610<---------AHL20(2) -------PIF5                                        <----------DOF2         --------->AHL20(2) ------>MYC2                                       <------NtERF2            <---------AHL20(2) -------MYC3                           ------>ZmHOX2a(2)   --------->MYB59 --------->AHL20(2)    <--- --------ANAC58                      --------->ARR11(3)  <---------MYB52(1)<---------AHL20(2)    <--- --------ANAC58                <------MYB46(1)    ------>NtERF2            <---------ATHB12      <--- ------ANAC58                  <------MYB83      --------->ANAC58          <---------ATHB51  <------- ------ANAC58     --------->YAB1<<<<<<<<<<MYB80  --------->ANAC58   <-----------GT1 --------->ARR11(3)   cgcgtgggggtagtcttcaattgtcatgttgtttggtttgatctctcagacgcgccttagttagctcattttcccaaataatttaaaatcctgcgatttt  29630300                                                                                                  <--                                                                                                  <--                                                                                                 ----                                                                                                -----                                                                                          <---------O2                                                                          --------->AHL20(2)   <-----                                                              -------->ATHB1              --------->TGA1a            ------>MYB83                                      --------->ATHB12            --------->O2            ------>MYB46(1)                                   --------->AHL20(2)          <---------TGA1a            --------->MYB52(1)                                --------->ATHB51       ----------->HVH21            -------->P                                        <--------HAHB4         --------->ANAC46          ------->GAMYB                                       <---------ICU4       --------->ANAC58          --------->AtMYB61                                   <---------AHL20(2)   --------->ANAC58         <---------MYB52(2)                                  <---------ATHB12      --------->ANAC46 - ------ANAC46                                         <---------ZAT6      <---------AHL20(2)--------- ------ANAC58                                      <--------P--------->ICU4--------->AHL20(2)-------- ------ANAC58                                      =================================================MYC_MYB ---DOF2 --------->MYB46(3)                  --------->ALFIN1<---------ATHB51      --------->ANAC55(2)   cgtggtctataaccaacccgaattgatgaaacgcgctcttcatgcgcatgggggtagtcttcaattatttgcatatttaaaatacacgcgacaagtgggc  29630400 -------SPL7 ----NtERF2 ----->RAP2.6(2) ---------->AtSPL8                  <---------MYB52(1) ----PCF2                        <------------MYB.PH3(1)                           ---------->DOF2 ------>TEIL                   <-----------GT1--------->YAB1        <---------ATHB12               <- >ALFIN1              <-----------GT1  ----------->GT1            --------->WOX13(1)      <---------ALFIN1 ->ZAT18          <---------YAB1<---------At5g28300 --------->TOE2(3)    ----------->RAV1(2)     ----   cggaccttatacacactcttatttttgccattgtaaccgtttagtaaatagtaacctatattttagaacaatcaggcctggcccatatagcaccatctca  29630500  Previous    Next  AGI:  At1g78790.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK96095.1) Range:  from: 29628422    to: 29629971    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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